MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Heart_E12.5_H3K9me3_38_169_0.535_0
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.834	0.01	0.131	0.025
0.676	0.009	0.098	0.217
0.165	0.725	0.021	0.089
0.222	0.669	0.026	0.083
0.934	0.007	0.027	0.032
0.063	0.854	0.015	0.068
0.013	0.938	0.016	0.033
0.925	0.04	0.015	0.02
0.864	0.027	0.063	0.046
0.11	0.79	0.017	0.083
0.061	0.853	0.013	0.073
0.937	0.036	0.01	0.017

MOTIF	Hindbrain_E15.5_H3K9me3_79_79_0.517_8.655006e-24
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.041773	0.715406	0.055266	0.187555
0.242645	0.745027	0.001401	0.010927
0.846072	0.081757	0.044252	0.027918
0.005953	0.927923	0.066124	0.0
0.055729	0.842079	0.05975	0.042442
0.937921	0.013968	0.005704	0.042406
0.95009	0.031897	0.006129	0.011884
0.146875	0.689213	0.039121	0.124791
0.070846	0.838613	0.001266	0.089276

MOTIF	Forebrain_E12.5_H3K9me3_94_61_0.509_1.080873e-37
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.041846	0.899794	0.0	0.05836
0.284811	0.651167	0.006096	0.057925
0.880046	0.036506	0.080413	0.003036
0.015457	0.91511	0.011641	0.057792
0.208177	0.719099	0.014917	0.057807
0.764526	0.029252	0.139606	0.066617
0.892467	0.0	0.096287	0.011246
0.034738	0.876491	0.017334	0.071438
0.035083	0.857214	0.047251	0.060452

MOTIF	Limb_E12.5_H3K9me3_103_108_0.513_1.308623e-57
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.07128	0.896686	0.0	0.032034
0.148378	0.788528	0.0	0.063094
0.971411	0.017645	0.010944	0.0
0.0	0.948702	0.007289	0.044008
0.182722	0.727574	0.055787	0.033917
0.80117	0.036442	0.038025	0.124363
0.910176	0.065629	0.005969	0.018226
0.203848	0.708514	0.003871	0.083767
0.0	0.818938	0.001732	0.17933

MOTIF	Liver_E12.5_H3K9me3_36_105_0.518_4.612727e-46
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.297272	0.373625	0.197206	0.131897
0.052694	0.861216	0.005407	0.080684
0.738845	0.064959	0.192326	0.003869
0.0	0.928244	0.040388	0.031368
0.04221	0.831003	0.12548	0.001306
0.94462	0.013621	0.034015	0.007744
0.789314	0.060867	0.046518	0.103301
0.167428	0.730356	0.052369	0.049847
0.00905	0.919524	0.036816	0.03461
0.831852	0.087872	0.068277	0.011999

MOTIF	Midbrain_E14.5_H3K9me3_45_47_0.519_5.235948e-27
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.123781	0.872009	0.002339	0.001871
0.726674	0.098323	0.139326	0.035678
0.006504	0.989486	0.00401	0.0
0.029255	0.885694	0.07307	0.011981
0.9701	0.015816	0.002769	0.011315
0.930635	0.032181	0.011639	0.025545
0.064878	0.7749	0.012577	0.147646
0.030463	0.900017	0.036174	0.033346
0.8103	0.156906	0.030486	0.002309
0.405736	0.242482	0.308088	0.043694

MOTIF	Midbrain_E16.5_H3K9me3_47_128_0.520_8.233433e-28
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.140241	0.857786	0.001422	0.000551
0.809668	0.030333	0.088468	0.071531
0.045598	0.949387	0.002563	0.002453
0.045261	0.85112	0.102768	0.000851
0.975743	0.01082	0.004426	0.009011
0.964109	0.00089	0.007253	0.027747
0.468139	0.386323	0.028447	0.117091
0.07124	0.757806	0.120981	0.049972
0.963209	0.034369	0.002422	0.0

MOTIF	Heart_E15.5_H3K9me3_81_135_0.511_1.979324e-07
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.248447	0.352329	0.399225
0.928293	0.042479	0.029229	0.0
0.751062	0.0	0.212454	0.036484
0.211907	0.788093	0.0	0.0
0.0	0.980497	0.003693	0.015809
0.914018	0.002433	0.007983	0.075566
0.610797	0.0	0.339075	0.050129
0.064009	0.914446	0.021545	0.0
0.016936	0.983064	0.0	0.0

MOTIF	Hindbrain_E14.5_H3K9me3_50_28_0.520_1.421915e-17
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.100204	0.624872	0.166178	0.108746
0.979124	0.002289	0.004755	0.013832
0.768334	0.057837	0.168785	0.005043
0.230784	0.727123	0.042093	0.0
0.0233	0.936949	0.017738	0.022013
0.926575	0.045895	0.006893	0.020637
0.644677	0.141931	0.191944	0.021449
0.038565	0.859732	0.057481	0.044222
0.057301	0.933294	0.009405	0.0

MOTIF	Hindbrain_E11.5_H3K9me3_56_149_0.514_0.003217791
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.608396	0.186298	0.046732	0.158574
0.90855	0.021159	0.017607	0.052684
0.090547	0.883788	0.020333	0.005332
0.045866	0.926374	0.011497	0.016263
0.907332	0.011231	0.019819	0.061619
0.584117	0.016052	0.394389	0.005443
0.0	0.898474	0.04324	0.058286
0.123113	0.816922	0.059964	0.0
0.899146	0.025812	0.065921	0.00912

MOTIF	Forebrain_P0_H3K9me3_40_121_0.525_5.265989e-12
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.600769	0.280104	0.037519	0.081609
0.881687	0.052288	0.066024	0.0
0.033937	0.889388	0.064223	0.012452
0.062363	0.922065	0.006262	0.009309
0.76118	0.206941	0.005656	0.026223
0.813745	0.148581	0.021952	0.015722
0.024477	0.909606	0.012412	0.053506
0.17233	0.760333	0.013048	0.054289
0.953722	0.020441	0.020816	0.005021

MOTIF	Forebrain_E11.5_H3K9me3_82_88_0.506_2.164122e-13
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.209348	0.674475	0.077787	0.03839
0.621196	0.303814	0.040422	0.034568
0.724679	0.041761	0.192792	0.040769
0.064436	0.90155	0.026259	0.007755
0.031566	0.939774	0.016423	0.012237
0.801281	0.169679	0.00491	0.02413
0.78819	0.050304	0.161506	0.0
0.037206	0.868396	0.030832	0.063566
0.043307	0.87957	0.021795	0.055328
0.920025	0.024752	0.020602	0.034621
0.472304	0.020741	0.380195	0.126759

MOTIF	Hindbrain_E15.5_H3K9me3_51_88_0.524_6.58755e-25
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.681384	0.259141	0.001426	0.05805
0.66078	0.129083	0.184184	0.025953
0.144434	0.822662	0.014437	0.018468
0.057688	0.922452	0.003715	0.016145
0.916942	0.068266	0.007584	0.007208
0.822686	0.00966	0.140043	0.027611
0.061363	0.887514	0.032979	0.018144
0.021204	0.97352	0.005276	0.0
0.879955	0.120045	0.0	0.0

MOTIF	Hindbrain_P0_H3K9me3_14_8_0.529_3.216168e-21
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.107408	0.361802	0.470452	0.060337
0.668168	0.282976	0.030271	0.018585
0.784523	0.01478	0.169237	0.03146
0.032796	0.881103	0.06946	0.016641
0.047945	0.850859	0.075871	0.025325
0.97307	0.015766	0.001417	0.009747
0.598302	0.035924	0.348747	0.017027
0.060084	0.9095	0.026521	0.003896
0.016227	0.940004	0.005425	0.038344
0.973159	0.019093	0.007749	0.0
0.413685	0.136842	0.388472	0.061001
0.128974	0.384359	0.0	0.486667

MOTIF	Forebrain_P0_H3K9me3_44_109_0.524_2.41888e-13
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.796243	0.044373	0.159384	0.0
0.099069	0.789667	0.104822	0.006442
0.110782	0.759762	0.063985	0.06547
0.895161	0.025859	0.037327	0.041653
0.91403	0.015932	0.020529	0.049509
0.005968	0.927317	0.052833	0.013883
0.02833	0.950515	0.003401	0.017753
0.861995	0.081534	0.044755	0.011716
0.455171	0.40191	0.002437	0.140482
0.609974	0.0	0.13125	0.258776

MOTIF	Limb_E13.5_H3K9me3_87_117_0.517_1.992673e-36
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.525925	0.472165	0.001909
0.670014	0.033603	0.292647	0.003736
0.020382	0.911467	0.028468	0.039684
0.0	0.606857	0.383388	0.009754
0.93486	0.000266	0.053788	0.011086
0.897468	0.0	0.05741	0.045122
0.054641	0.923071	0.017416	0.004873
0.026235	0.898802	0.068885	0.006079
0.745968	0.206728	0.006826	0.040478

MOTIF	Midbrain_E15.5_H3K9me3_4_85_0.547_1.764714e-40
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.841879	0.030773	0.127348
0.020815	0.935692	0.017867	0.025626
0.936813	0.057575	0.005161	0.000451
0.836824	0.01852	0.103823	0.040833
0.043756	0.707505	0.140674	0.108065
0.159489	0.785123	0.027068	0.028321
0.909919	0.063588	0.026493	0.0
0.760907	0.030688	0.18273	0.025675
0.757885	0.032424	0.000807	0.208885
0.174092	0.148433	0.503215	0.17426

MOTIF	Heart_E12.5_H3K9me3_43_48_0.534_1.441644e-194
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.920762	0.026856	0.026512	0.02587
0.010175	0.924853	0.0	0.064972
0.036641	0.925928	0.027447	0.009983
0.949435	0.032375	0.01819	0.0
0.876447	0.016204	0.063835	0.043514
0.001852	0.891698	0.0	0.106451
0.005828	0.94001	0.001391	0.052772
0.778966	0.149993	0.04264	0.028402
0.615431	0.010868	0.34723	0.026471
0.508635	0.290165	0.0	0.2012

MOTIF	Heart_E13.5_H3K9me3_51_123_0.530_5.140057e-62
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.971075	0.026742	0.002183	0.0
0.035875	0.964125	0.0	0.0
0.0	0.922988	0.056873	0.020139
0.909077	0.066504	0.011035	0.013384
0.84847	0.027728	0.075841	0.047962
0.028995	0.860655	0.0	0.11035
0.015047	0.947955	0.000367	0.03663
0.790636	0.154696	0.042239	0.012429
0.472261	0.015965	0.494845	0.016928

MOTIF	Liver_E13.5_H3K9me3_62_131_0.508_1.210087e-12
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.930629	0.035538	0.033833	0.0
0.0	0.96615	0.0	0.03385
0.0	0.936042	0.055526	0.008432
0.950096	0.010604	0.016319	0.022981
0.843935	0.053027	0.066404	0.036634
0.0	0.929074	0.0	0.070926
0.0	0.964239	0.007871	0.02789
0.742634	0.129687	0.098075	0.029605
0.465331	0.014764	0.478875	0.04103

MOTIF	Forebrain_E15.5_H3K9me3_13_26_0.536_5.509632e-35
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.833133	0.097006	0.039325	0.030536
0.014937	0.826066	0.001786	0.157211
0.011186	0.936918	0.028479	0.023417
0.915694	0.054944	0.006775	0.022587
0.900041	0.019258	0.020387	0.060314
0.129956	0.819186	0.005773	0.045085
0.031363	0.908117	0.048769	0.011751
0.784566	0.200136	0.004254	0.011043
0.69498	0.053135	0.239961	0.011924
0.53894	0.220675	0.078868	0.161517

MOTIF	Hindbrain_E15.5_H3K9me3_52_76_0.524_3.080422e-28
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.828415	0.080488	0.026672	0.064425
0.062105	0.73592	0.008819	0.193156
0.005158	0.934961	0.039594	0.020287
0.909047	0.072851	0.003076	0.015027
0.898411	0.024527	0.05002	0.027042
0.167335	0.756427	0.012278	0.06396
0.138575	0.836341	0.015206	0.009878
0.862523	0.12135	0.016127	0.0
0.784639	0.037051	0.165464	0.012846
0.567468	0.224548	0.109405	0.098579
0.446736	0.430291	0.122973	0.0

MOTIF	Hindbrain_E13.5_H3K9me3_41_112_0.526_1.593499e-32
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.674309	0.137769	0.187922	0.0
0.055298	0.942694	0.002008	0.0
0.021992	0.902215	0.075792	0.0
0.972692	0.024883	0.002424	0.0
0.944534	0.0	0.05271	0.002756
0.019497	0.929207	0.009498	0.041797
0.068531	0.884608	0.028195	0.018666
0.6733	0.268674	0.034069	0.023957
0.758841	0.033164	0.140972	0.067022

MOTIF	Heart_E15.5_H3K9me3_57_138_0.518_2.659231e-12
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.622935	0.091445	0.279664	0.005956
0.050903	0.925073	0.010562	0.013462
0.014483	0.888504	0.097013	0.0
0.895075	0.094645	0.008955	0.001325
0.881262	0.019555	0.050798	0.048385
0.059547	0.852024	0.047469	0.04096
0.027571	0.951122	0.007941	0.013366
0.761414	0.231122	0.003031	0.004434
0.567147	0.122942	0.248895	0.061016
0.443043	0.172774	0.086332	0.297852

MOTIF	Midbrain_E13.5_H3K9me3_70_78_0.520_7.800449e-28
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.718456	0.065081	0.215307	0.001156
0.024898	0.937667	0.005044	0.032391
0.00701	0.921051	0.057365	0.014574
0.854792	0.116536	0.016367	0.012305
0.897155	0.013441	0.046078	0.043326
0.052682	0.855769	0.02129	0.07026
0.102461	0.849603	0.038161	0.009775
0.739936	0.196772	0.045891	0.017401
0.591217	0.028869	0.337925	0.041989
0.60817	0.20228	0.011819	0.177731

MOTIF	Neural-Tube_E14.5_H3K9me3_47_145_0.515_1.261912e-05
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.693603	0.142553	0.162714	0.00113
0.028265	0.907902	0.063833	0.0
0.007094	0.913179	0.059149	0.020578
0.847498	0.09011	0.010275	0.052117
0.865218	0.013423	0.074334	0.047025
0.037567	0.902299	0.031107	0.029028
0.095788	0.841006	0.063206	0.0
0.695767	0.278221	0.001409	0.024602
0.63397	0.047671	0.296345	0.022014
0.552933	0.145127	0.090912	0.211029

MOTIF	Midbrain_P0_H3K9me3_47_57_0.521_4.515076e-21
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.791721	0.022991	0.179922	0.005366
0.136756	0.830146	0.031194	0.001904
0.024271	0.91695	0.044321	0.014457
0.757107	0.218121	0.003485	0.021288
0.74726	0.034992	0.174142	0.043607
0.057186	0.862898	0.055485	0.024431
0.075655	0.858018	0.0587	0.007627
0.864062	0.114267	0.011409	0.010262
0.703981	0.094546	0.14306	0.058414
0.380573	0.358209	0.126746	0.134472

MOTIF	Neural-Tube_E15.5_H3K9me3_20_104_0.532_7.090542e-38
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.758973	0.06821	0.16506	0.007757
0.132834	0.730374	0.070176	0.066617
0.024494	0.881172	0.060019	0.034315
0.840164	0.127656	0.003433	0.028747
0.845373	0.040219	0.074083	0.040325
0.030246	0.821735	0.086677	0.061342
0.108937	0.861873	0.014125	0.015065
0.884578	0.104088	0.009666	0.001667
0.692139	0.058391	0.191364	0.058106