MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Hindbrain_E13.5_H3K4me3_33_74_0.656_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.0	0.0	1.0	0.0
0.428619	0.1249	0.446481	0.0
0.0	0.02517	0.97483	0.0
0.704205	0.0	0.176483	0.119312
0.0	0.951394	0.0	0.048606
0.01834	0.0	0.98166	0.0
0.0	0.916242	0.0	0.083758
0.0	0.706289	0.0	0.293711

MOTIF	Lung_E14.5_H3K4me3_35_41_0.658_2.323464e-310
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.312467	0.035036	0.560707	0.09179
0.02597	0.0	0.97403	0.0
0.016133	0.93873	0.013052	0.032084
0.004835	0.021588	0.973577	0.0
0.179359	0.0	0.037309	0.783333
0.0	0.970518	0.029482	0.0
0.241752	0.631313	0.091802	0.035134
0.193035	0.763937	0.030907	0.012121
0.014126	0.807561	0.04091	0.137404
0.184251	0.241458	0.526099	0.048192

MOTIF	Cranio-Facial_E11.5_H3K4me2_76_80_0.552_6.194961e-96
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.169983	0.051015	0.760546	0.018456
0.020755	0.918964	0.035349	0.024932
0.151049	0.0187	0.830251	0.0
0.110297	0.037566	0.014121	0.838016
0.0	0.961632	0.02129	0.017078
0.084135	0.629157	0.026861	0.259847
0.040762	0.831474	0.0	0.127764
0.004347	0.921115	0.008325	0.066212
0.699485	0.216613	0.064589	0.019314
0.463083	0.291569	0.182819	0.062529

MOTIF	Limb_E11.5_H3K4me2_31_17_0.625_1.665803e-311
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.19954	0.660374	0.114591	0.025496
0.163078	0.062856	0.709385	0.064681
0.014839	0.884684	0.044713	0.055764
0.039103	0.010215	0.661939	0.288743
0.00972	0.048978	0.02665	0.914652
0.005917	0.919748	0.028767	0.045567
0.174684	0.762145	0.02633	0.036842
0.098277	0.821218	0.041462	0.039042
0.038924	0.892003	0.026924	0.042149
0.20508	0.01032	0.630166	0.154434
0.035683	0.844295	0.095085	0.024937

MOTIF	Liver_E14.5_H3K4me2_41_26_0.574_2.326102e-311
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.016892	0.84042	0.057836	0.084853
0.002232	0.091691	0.835267	0.07081
0.026421	0.004948	0.018028	0.950603
0.059531	0.780154	0.06054	0.099775
0.198789	0.71538	0.044596	0.041235
0.099753	0.659842	0.022549	0.217855
0.006717	0.814563	0.027211	0.15151
0.034549	0.020352	0.726607	0.218492
0.003683	0.935298	0.048323	0.012696

MOTIF	Liver_E15.5_H3K4me2_48_28_0.572_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.009175	0.728939	0.059184	0.202702
0.011561	0.05723	0.876543	0.054666
0.07403	0.0	0.037837	0.888133
0.034373	0.819353	0.030361	0.115913
0.111802	0.821166	0.040866	0.026166
0.09832	0.831049	0.040332	0.030299
0.012159	0.782045	0.094199	0.111596
0.059016	0.011219	0.726826	0.202939
0.099183	0.83873	0.030123	0.031965

MOTIF	Heart_E12.5_H3K4me2_32_19_0.583_1.264858e-316
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.171472	0.689784	0.080193	0.058551
0.008087	0.073372	0.737909	0.180632
0.034989	0.021308	0.041417	0.902286
0.031546	0.771992	0.025965	0.170497
0.126326	0.789979	0.033452	0.050243
0.069148	0.771906	0.042875	0.116072
0.170396	0.752604	0.038957	0.038042
0.023257	0.016477	0.950028	0.010238
0.118241	0.775108	0.089544	0.017107

MOTIF	Lung_E14.5_H3K4me2_25_17_0.600_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.164754	0.600561	0.056637	0.178048
0.016387	0.054181	0.815239	0.114192
0.136206	0.03357	0.040052	0.790172
0.035379	0.883489	0.038255	0.042878
0.106704	0.698277	0.026801	0.168218
0.077578	0.85714	0.046772	0.01851
0.024527	0.819431	0.039059	0.116982
0.106972	0.021934	0.85026	0.020834
0.099753	0.830767	0.046198	0.023282

MOTIF	Midbrain_E11.5_H3K4me2_31_14_0.636_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.193399	0.229075	0.366901	0.210625
0.136681	0.694855	0.054604	0.11386
0.023319	0.038752	0.872026	0.065903
0.042177	0.006426	0.039279	0.912118
0.049021	0.86455	0.022435	0.063994
0.105102	0.686627	0.043126	0.165145
0.08844	0.820553	0.063932	0.027075
0.02376	0.828703	0.034263	0.113274
0.050623	0.018656	0.846699	0.084022
0.079322	0.862145	0.038067	0.020466

MOTIF	Hindbrain_E12.5_H3K4me2_47_25_0.584_3.511536e-312
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.037818	0.781768	0.093926	0.086488
0.015072	0.027222	0.673697	0.284009
0.036463	0.006048	0.010131	0.947358
0.03842	0.805003	0.012679	0.143898
0.144155	0.768217	0.027214	0.060414
0.01025	0.934115	0.024986	0.030649
0.186664	0.731098	0.040184	0.042053
0.029514	0.007536	0.754508	0.208442
0.112774	0.798975	0.071481	0.01677

MOTIF	Stomach_E16.5_H3K4me2_35_24_0.600_3.913988e-320
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.040634	0.805433	0.065728	0.088205
0.092657	0.020558	0.649284	0.237501
0.034826	0.027248	0.026947	0.91098
0.00523	0.916585	0.015525	0.06266
0.109351	0.711843	0.040926	0.13788
0.073277	0.863474	0.045595	0.017653
0.057793	0.77673	0.04755	0.117927
0.022096	0.01567	0.871821	0.090414
0.10612	0.826221	0.056858	0.010801

MOTIF	Hindbrain_E11.5_H3K4me2_49_81_0.611_6.256382e-312
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.099165	0.0	0.885622	0.015213
0.126975	0.0	0.745996	0.127029
0.011326	0.932841	0.01915	0.036683
0.008367	0.0	0.954945	0.036688
0.212775	0.076976	0.0	0.710249
0.012189	0.987811	0.0	0.0
0.074121	0.841391	0.021421	0.063067
0.08184	0.829266	0.083491	0.005402
0.090168	0.649457	0.077948	0.182426

MOTIF	Midbrain_E14.5_H3K4me2_70_95_0.562_2.674534e-302
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.168734	0.072184	0.612166	0.146916
0.025673	0.025385	0.774508	0.174434
0.0	0.803073	0.011494	0.185434
0.022905	0.0	0.977095	0.0
0.025615	0.06262	0.061666	0.850099
0.0	0.97949	0.0	0.02051
0.103189	0.832294	0.039782	0.024735
0.052151	0.937234	0.0	0.010614
0.01522	0.757967	0.044666	0.182147

MOTIF	Kidney_P0_H3K4me2_47_25_0.579_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.143428	0.659595	0.121939	0.075038
0.041304	0.031167	0.909726	0.017804
0.095119	0.029102	0.785425	0.090353
0.064416	0.061607	0.696334	0.177643
0.014663	0.032285	0.945868	0.007183
0.848288	0.013125	0.048102	0.090485
0.019875	0.913846	0.043993	0.022286
0.280055	0.029518	0.657331	0.033095
0.012384	0.802554	0.052345	0.132718

MOTIF	Stomach_E14.5_H3K4me2_49_14_0.589_1.427046e-274
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.015924	0.73917	0.041372	0.203534
0.028217	0.028278	0.891387	0.052118
0.036052	0.056267	0.832493	0.075188
0.056779	0.061998	0.70497	0.176253
0.033162	0.029477	0.936261	0.0011
0.907845	0.028454	0.031925	0.031776
0.178546	0.764834	0.040269	0.016351
0.186822	0.041581	0.679363	0.092234
0.091028	0.815987	0.034412	0.058573
0.02251	0.660476	0.056809	0.260205

MOTIF	Stomach_P0_H3K4me2_43_24_0.584_2.425862e-321
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.081948	0.73209	0.032363	0.153599
0.091517	0.05725	0.80263	0.048602
0.114701	0.024127	0.786171	0.075001
0.091234	0.015224	0.772822	0.120721
0.133568	0.040647	0.821761	0.004023
0.906443	0.030001	0.0	0.063556
0.102564	0.816617	0.071138	0.009681
0.076065	0.122014	0.766073	0.035849
0.033811	0.893331	0.006626	0.066232

MOTIF	Stomach_E15.5_H3K9ac_9_27_0.701_1.029342e-312
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.078002	0.0	0.921998	0.0
0.363886	0.0	0.612587	0.023528
0.019593	0.059008	0.880417	0.040982
0.555153	0.378845	0.033192	0.03281
0.019625	0.936721	0.023527	0.020127
0.041105	0.0	0.934174	0.024722
0.0	0.975998	0.0	0.024002
0.019079	0.045757	0.935164	0.0
0.80885	0.064341	0.025901	0.100908

MOTIF	Midbrain_E11.5_H3K9ac_96_87_0.504_8.741184e-14
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.054947	0.0	0.945053	0.0
0.039518	0.761433	0.056253	0.142796
0.017624	0.0	0.930294	0.052082
0.018985	0.153081	0.0	0.827934
0.018209	0.919494	0.015047	0.047251
0.019752	0.899165	0.021549	0.059534
0.043846	0.917652	0.022525	0.015977
0.020156	0.919948	0.015244	0.044651
1.0	0.0	0.0	0.0

MOTIF	Cranio-Facial_E13.5_H3K9ac_40_29_0.568_1.131587e-276
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.134247	0.572257	0.288782	0.004714
0.064154	0.007193	0.912413	0.01624
0.007489	0.935211	0.016272	0.041027
0.057589	0.015071	0.804676	0.122665
0.058736	0.049227	0.014643	0.877394
0.025197	0.725603	0.010831	0.23837
0.107496	0.788784	0.009891	0.093829
0.021502	0.882551	0.049694	0.046253
0.013896	0.944756	0.009157	0.032192
0.448341	0.035112	0.435431	0.081115

MOTIF	Hindbrain_E12.5_H3K9ac_40_28_0.580_3.56955e-277
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.089274	0.869963	0.025538	0.015225
0.043771	0.016522	0.904839	0.034867
0.212217	0.665517	0.057732	0.064535
0.003591	0.029238	0.753527	0.213644
0.133081	0.0	0.015392	0.851526
0.002632	0.900654	0.00409	0.092623
0.130539	0.752843	0.042072	0.074545
0.011651	0.900068	0.033101	0.05518
0.044777	0.795262	0.0	0.159961

MOTIF	Stomach_E16.5_H3K9ac_49_40_0.563_2.293304e-260
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.079013	0.920987	0.0	0.0
0.066053	0.016077	0.91787	0.0
0.392743	0.567577	0.019095	0.020585
0.0	0.031807	0.942689	0.025503
0.063967	0.007703	0.0	0.92833
0.002013	0.74166	0.010682	0.245644
0.137152	0.660884	0.040485	0.161478
0.007977	0.89701	0.023156	0.071858
0.046307	0.828213	0.044294	0.081186

MOTIF	Forebrain_E12.5_H3K9ac_21_12_0.618_7.282525e-312
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.135985	0.596146	0.17167	0.096198
0.079915	0.846519	0.030447	0.043118
0.09315	0.045006	0.819846	0.041997
0.084997	0.030083	0.809482	0.075439
0.042823	0.04397	0.824264	0.088943
0.130382	0.05922	0.799203	0.011196
0.797202	0.045218	0.03902	0.11856
0.164265	0.78939	0.030827	0.015518
0.199375	0.02539	0.729035	0.0462
0.056219	0.866261	0.031878	0.045642
0.0795	0.134153	0.708004	0.078342

MOTIF	Limb_E14.5_H3K9ac_32_24_0.599_3.86325e-309
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.037093	0.905285	0.022725	0.034898
0.105279	0.053426	0.826173	0.015122
0.113538	0.620145	0.03409	0.232226
0.040062	0.03866	0.726433	0.194845
0.06187	0.007158	0.031487	0.899486
0.030523	0.777154	0.025791	0.166533
0.096693	0.836442	0.007561	0.059304
0.060517	0.87359	0.028965	0.036928
0.042195	0.825985	0.052661	0.079159
0.137947	0.012028	0.649821	0.200205

MOTIF	Neural-Tube_E13.5_H3K9ac_68_50_0.541_5.344918e-144
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.210567	0.572327	0.171407	0.045699
0.027373	0.049808	0.903633	0.019187
0.150787	0.562263	0.006735	0.280215
0.020922	0.048125	0.901623	0.02933
0.044165	0.033803	0.013934	0.908099
0.005556	0.936337	0.023253	0.034855
0.089837	0.844102	0.033012	0.033049
0.105352	0.79102	0.033238	0.07039
0.02561	0.912359	0.00298	0.059051

MOTIF	Neural-Tube_E11.5_H3K9ac_47_31_0.582_4.371049e-220
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.174654	0.742356	0.020668	0.062322
0.053084	0.030419	0.904473	0.012024
0.125332	0.66409	0.046939	0.163639
0.025369	0.046564	0.890964	0.037103
0.033885	0.027311	0.0	0.938804
0.022345	0.796043	0.018759	0.162853
0.130801	0.734173	0.048342	0.086684
0.067964	0.849074	0.051532	0.03143
0.064121	0.750233	0.027122	0.158525

MOTIF	Kidney_P0_H3K9ac_42_25_0.582_2.642873e-210
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.055116	0.744179	0.193208	0.007497
0.073143	0.035467	0.859575	0.031815
0.087354	0.666987	0.119944	0.125715
0.045327	0.022637	0.876692	0.055345
0.061669	0.020214	0.012629	0.905488
0.01449	0.83717	0.030781	0.117559
0.071115	0.805374	0.072502	0.051009
0.078995	0.828538	0.028559	0.063908
0.032441	0.769164	0.051354	0.147041

MOTIF	Lung_P0_H3K9ac_39_28_0.607_2.141066e-256
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.164479	0.710621	0.106562	0.018338
0.0231	0.055554	0.856635	0.06471
0.073014	0.728692	0.065269	0.133025
0.030433	0.051479	0.799182	0.118906
0.051318	0.018087	0.035902	0.894693
0.008121	0.905475	0.003724	0.08268
0.038713	0.772158	0.117898	0.071231
0.058493	0.855924	0.03948	0.046103
0.024088	0.782649	0.048363	0.1449

MOTIF	Stomach_P0_H3K9ac_59_38_0.558_2.306188e-140
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.149879	0.562113	0.177602	0.110406
0.027731	0.041677	0.902577	0.028014
0.115607	0.649743	0.064223	0.170427
0.010684	0.031656	0.819293	0.138367
0.026865	0.025461	0.017863	0.929811
0.000777	0.826687	0.003518	0.169018
0.038581	0.887308	0.012619	0.061493
0.03889	0.847176	0.049806	0.064128
0.031762	0.788256	0.01854	0.161442