MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Midbrain_E13.5_H3K4me2_51_24_0.581_3.104206e-300 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.001412 0.829026 0.080715 0.088848 0.052492 0.050058 0.033443 0.864007 0.005345 0.877396 0.098802 0.018457 0.189672 0.505627 0.157658 0.147043 0.03927 0.151746 0.797532 0.011452 0.138238 0.012877 0.772155 0.07673 0.042583 0.843506 0.076674 0.037236 0.023536 0.017618 0.021312 0.937534 0.0 0.918649 0.055337 0.026014 0.037003 0.0 0.922979 0.040018 0.0 0.397184 0.518169 0.084647 MOTIF Cranio-Facial_E12.5_H3K4me2_18_53_0.641_8.784626e-314 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.133606 0.6807 0.185694 0.0 0.232767 0.744844 0.0 0.022389 0.0 0.186814 0.813186 0.0 0.697837 0.0 0.080645 0.221518 0.043716 0.160096 0.796188 0.0 0.291295 0.434488 0.175852 0.098365 0.035506 0.774083 0.164968 0.025444 0.052258 0.039624 0.866403 0.041714 0.0 0.121202 0.66672 0.212078 MOTIF Stomach_E15.5_H3K4me2_36_45_0.601_1.645239e-321 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.078974 0.844736 0.07629 0.0 0.104701 0.862611 0.0 0.032689 0.0 0.064711 0.935289 0.0 0.768612 0.023517 0.137919 0.069952 0.019262 0.074498 0.864714 0.041526 0.171064 0.672858 0.10098 0.055098 0.00922 0.864531 0.10105 0.025199 0.307694 0.034027 0.628361 0.029918 0.138711 0.060391 0.678529 0.122369 MOTIF Intestine_E16.5_H3K4me2_53_35_0.576_5.500173e-313 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.202224 0.341511 0.317668 0.138597 0.101408 0.857179 0.041413 0.0 0.063489 0.823528 0.061894 0.051089 0.005283 0.06148 0.931661 0.001576 0.71395 0.013182 0.111773 0.161096 0.015837 0.040095 0.891975 0.052093 0.058774 0.873407 0.059879 0.00794 0.170377 0.783192 0.046431 0.0 0.405054 0.03042 0.545223 0.019303 0.0 0.040097 0.957497 0.002406 0.213225 0.470803 0.289954 0.026019 MOTIF Limb_E14.5_H3K4me2_50_29_0.575_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.207282 0.264409 0.285689 0.24262 0.0 0.949171 0.050829 0.0 0.09945 0.749966 0.005185 0.145399 0.005766 0.029811 0.964423 0.0 0.729103 0.030403 0.032504 0.207991 0.002483 0.007606 0.981408 0.008504 0.154517 0.632948 0.057671 0.154865 0.117424 0.771916 0.053078 0.057582 0.209059 0.033175 0.700333 0.057434 0.013487 0.021151 0.957803 0.007559 MOTIF Stomach_E16.5_H3K4me2_77_37_0.544_2.66614e-276 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.089457 0.872213 0.03833 0.0 0.204965 0.581877 0.033461 0.179697 0.0 0.043295 0.955079 0.001626 0.826338 0.032467 0.015231 0.125964 0.011124 0.035654 0.89629 0.056932 0.119789 0.816558 0.046884 0.016769 0.171311 0.665761 0.027516 0.135412 0.114536 0.034976 0.80895 0.041537 0.0 0.011724 0.965662 0.022614 0.479786 0.0 0.375469 0.144745 MOTIF Liver_E11.5_H3K27ac_26_16_0.548_9.631751e-95 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.551898 0.069364 0.074822 0.303917 0.025418 0.885348 0.084589 0.004645 0.011631 0.909347 0.038288 0.040734 0.0 0.066656 0.93017 0.003174 0.817953 0.095559 0.0 0.086488 0.002363 0.034759 0.962878 0.0 0.168422 0.701635 0.014987 0.114956 0.040667 0.532341 0.421026 0.005965 0.043938 0.0 0.904983 0.051078 0.081676 0.005952 0.793027 0.119345 MOTIF Kidney_E16.5_H3K4me2_51_36_0.584_1.310445e-311 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.01665 0.954524 0.028826 0.0 0.091719 0.794562 0.025442 0.088277 0.006394 0.0 0.993606 0.0 0.928287 0.022929 0.018808 0.029976 0.007187 0.015222 0.974274 0.003317 0.294553 0.578374 0.057343 0.06973 0.007347 0.678232 0.289491 0.024929 0.225618 0.707518 0.045922 0.020941 0.031577 0.033042 0.822888 0.112493 MOTIF Neural-Tube_E15.5_H3K4me2_64_41_0.551_4.145796e-271 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.051838 0.926103 0.02206 0.0 0.360113 0.561791 0.039432 0.038664 0.060245 0.03127 0.906304 0.002181 0.920887 0.010461 0.019355 0.049296 0.023002 0.03776 0.912816 0.026423 0.236922 0.686842 0.061537 0.014699 0.213626 0.756707 0.014286 0.015381 0.082055 0.798973 0.054057 0.064915 0.0 0.009704 0.932091 0.058205 0.263607 0.019102 0.383538 0.333752 MOTIF Forebrain_P0_H3K4me2_49_42_0.585_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.045823 0.918121 0.027547 0.008509 0.085884 0.866449 0.0 0.047667 0.022906 0.03585 0.931693 0.009551 0.81943 0.0 0.023529 0.157041 0.053869 0.020845 0.759824 0.165462 0.225611 0.664103 0.044788 0.065498 0.02715 0.835733 0.024326 0.112791 0.016069 0.960252 0.0 0.023679 0.214914 0.068008 0.691673 0.025405 0.063272 0.216711 0.686327 0.033691 MOTIF Liver_E16.5_H3K4me2_32_34_0.599_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.048691 0.951309 0.0 0.0 0.02298 0.924042 0.0 0.052978 0.0 0.0 1.0 0.0 0.864727 0.053815 0.059804 0.021654 0.023266 0.005295 0.952892 0.018546 0.041377 0.581448 0.052073 0.325102 0.047686 0.908445 0.0 0.04387 0.012498 0.551248 0.414027 0.022227 0.037441 0.068778 0.702011 0.19177 MOTIF Heart_E11.5_H3K4me2_61_40_0.557_3.120561e-309 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.043726 0.918224 0.034293 0.003757 0.076996 0.685359 0.072138 0.165508 0.005524 0.052887 0.937976 0.003613 0.865263 0.030538 0.023958 0.080241 0.008101 0.028342 0.876328 0.087229 0.006222 0.693532 0.10409 0.196156 0.097711 0.875054 0.017214 0.010021 0.1616 0.724166 0.078298 0.035936 0.166313 0.048928 0.686809 0.09795 MOTIF Liver_E11.5_H3K4me2_33_19_0.582_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.005146 0.956179 0.03227 0.006405 0.056702 0.779012 0.042371 0.121915 0.01199 0.026974 0.956514 0.004522 0.703611 0.044637 0.09289 0.158863 0.179981 0.076464 0.678207 0.065348 0.018551 0.797129 0.04487 0.13945 0.041324 0.896791 0.034121 0.027764 0.009755 0.794343 0.156595 0.039308 0.133819 0.036244 0.675065 0.154871 0.185291 0.197372 0.514578 0.102759 MOTIF Stomach_E14.5_H3K4me2_52_27_0.586_1.486946e-315 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.551475 0.179202 0.081094 0.188228 0.047504 0.889167 0.057612 0.005717 0.10882 0.783967 0.043569 0.063645 0.0 0.045587 0.934259 0.020154 0.865634 0.0 0.028463 0.105903 0.057175 0.021167 0.91727 0.004389 0.153203 0.734493 0.070115 0.04219 0.042979 0.879794 0.038704 0.038522 0.00876 0.679927 0.184924 0.12639 0.197233 0.0 0.686419 0.116349 MOTIF Hindbrain_E13.5_H3K4me3_34_21_0.655_1.425869e-316 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.038856 0.880107 0.059313 0.021725 0.14829 0.044497 0.605902 0.201311 0.001545 0.976359 0.021031 0.001066 0.171745 0.655771 0.027623 0.144862 0.001655 0.077578 0.920767 0.0 0.88769 0.037069 0.023913 0.051328 0.0 0.011638 0.964903 0.023459 0.201397 0.707213 0.03865 0.05274 0.031373 0.727247 0.080527 0.160853 0.087622 0.462202 0.38034 0.069837 0.026941 0.0 0.9414 0.03166 0.062398 0.580567 0.357034 0.0 MOTIF Cranio-Facial_E13.5_H3K4me3_46_41_0.623_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.17333 0.745389 0.081281 0.0 0.24676 0.670679 0.059577 0.022984 0.0 0.039308 0.960692 0.0 0.905898 0.04543 0.027268 0.021405 0.00794 0.01075 0.973925 0.007385 0.21122 0.66448 0.017912 0.106388 0.075514 0.828281 0.060522 0.035684 0.05501 0.112747 0.825814 0.00643 0.003855 0.033046 0.865688 0.097412 0.367314 0.154411 0.03162 0.446656 MOTIF Forebrain_E13.5_H3K4me3_64_48_0.607_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.271318 0.695168 0.033513 0.0 0.0 0.573543 0.245629 0.180828 0.011168 0.054615 0.934217 0.0 0.145145 0.022422 0.703084 0.129349 0.0 0.992024 0.007976 0.0 0.094187 0.0 0.010061 0.895752 0.0 0.965378 0.034622 0.0 0.046835 0.0 0.833066 0.1201 0.0 0.027661 0.96353 0.008809 MOTIF Neural-Tube_E15.5_H3K4me3_66_62_0.576_4.878228e-243 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.004997 0.983725 0.011277 0.0 0.126791 0.81764 0.006961 0.048608 0.008257 0.046736 0.945007 0.0 0.940232 0.016043 0.0 0.043725 0.002323 0.033945 0.963733 0.0 0.175891 0.549864 0.079716 0.194529 0.24552 0.497965 0.082241 0.174274 0.211605 0.080463 0.701906 0.006026 0.042864 0.031904 0.911947 0.013286 0.0 0.254386 0.684604 0.06101 MOTIF Neural-Tube_E12.5_H3K4me3_66_23_0.566_7.001231e-95 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.419924 0.0 0.231132 0.348943 0.022582 0.912131 0.046896 0.01839 0.200722 0.671996 0.039646 0.087636 0.0 0.193222 0.803696 0.003082 0.875631 0.045608 0.058188 0.020572 0.05218 0.022136 0.868222 0.057463 0.010203 0.926667 0.05648 0.00665 0.026661 0.740375 0.081547 0.151417 0.041058 0.052225 0.65487 0.251847 0.025959 0.057395 0.882451 0.034196 0.402187 0.0 0.43435 0.163463 MOTIF Lung_E16.5_H3K4me3_72_63_0.548_7.302309e-198 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.974983 0.025017 0.0 0.113581 0.713922 0.0 0.172497 0.00889 0.268155 0.722955 0.0 0.890598 0.045548 0.0 0.063853 0.0 0.034811 0.885572 0.079617 0.094006 0.840921 0.0 0.065073 0.042951 0.709563 0.045963 0.201523 0.024098 0.048555 0.731372 0.195975 0.02812 0.02244 0.922035 0.027406 MOTIF Forebrain_E16.5_H3K4me3_70_42_0.561_5.803374e-247 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.910994 0.071245 0.017762 0.202375 0.768105 0.009129 0.02039 0.0 0.157227 0.83918 0.003593 0.827064 0.050838 0.038458 0.083641 0.0 0.046208 0.953792 0.0 0.082628 0.7358 0.091102 0.09047 0.153325 0.700835 0.06917 0.076671 0.160488 0.036884 0.547962 0.254666 0.02288 0.02751 0.939879 0.009731 0.185198 0.182842 0.604328 0.027632 MOTIF Stomach_E16.5_H3K4me3_70_47_0.576_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.00175 0.920879 0.068393 0.008978 0.230557 0.593869 0.055925 0.11965 0.0 0.185236 0.81424 0.000524 0.886275 0.030434 0.02895 0.054341 0.0039 0.079503 0.913978 0.002619 0.073271 0.818215 0.068142 0.040372 0.124415 0.625515 0.086882 0.163188 0.115053 0.061515 0.73162 0.091813 0.070598 0.064117 0.819754 0.045531 MOTIF Kidney_E14.5_H3K9ac_78_49_0.533_9.207583e-38 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.012404 0.944718 0.042877 0.0 0.48458 0.466656 0.004888 0.043876 0.0 0.058026 0.941974 0.0 0.822993 0.043001 0.043819 0.090187 0.006121 0.04031 0.947461 0.006108 0.091337 0.830684 0.070811 0.007167 0.130509 0.717191 0.072813 0.079487 0.206445 0.016016 0.724578 0.052961 0.009498 0.008452 0.98205 0.0 0.343269 0.55104 0.0 0.105692 MOTIF Hindbrain_E11.5_H3K9ac_50_34_0.573_1.125841e-181 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.014839 0.915407 0.069755 0.0 0.239197 0.702721 0.02423 0.033852 0.0 0.061284 0.938716 0.0 0.863836 0.0 0.104087 0.032077 0.0 0.02025 0.974249 0.005501 0.124844 0.780845 0.038784 0.055527 0.225621 0.675419 0.059199 0.03976 0.145668 0.018704 0.795267 0.040362 0.18452 0.081046 0.648324 0.086109 0.200599 0.395136 0.296152 0.108113 MOTIF Liver_E14.5_H3K9ac_34_39_0.595_6.858761e-304 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.005528 0.882529 0.111943 0.0 0.104037 0.7924 0.01166 0.091903 0.0 0.103096 0.896904 0.0 0.689062 0.123753 0.039672 0.147514 0.012632 0.115541 0.820304 0.051524 0.133268 0.712347 0.119082 0.035303 0.182671 0.583709 0.098875 0.134745 0.082724 0.056802 0.789306 0.071167 0.014648 0.03885 0.831566 0.114937 MOTIF Lung_E16.5_H3K9ac_13_56_0.610_2.816174e-321 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.013232 0.962048 0.02472 0.0 0.056532 0.895477 0.0 0.047992 0.0 0.092729 0.907271 0.0 0.810594 0.0 0.161649 0.027756 0.12077 0.017467 0.591792 0.269972 0.10549 0.775999 0.0 0.11851 0.0 0.903759 0.073528 0.022713 0.043713 0.052697 0.90359 0.0 0.153141 0.02801 0.660579 0.158269 MOTIF Lung_E15.5_H3K9ac_18_32_0.674_2.601445e-309 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.225482 0.288287 0.035892 0.450339 0.0 0.942877 0.057123 0.0 0.047612 0.909097 0.033044 0.010248 0.008542 0.034964 0.956494 0.0 0.833346 0.040813 0.045279 0.080562 0.038203 0.046837 0.839859 0.075101 0.301005 0.375318 0.117328 0.20635 0.008604 0.919688 0.055417 0.016291 0.033892 0.074349 0.828075 0.063683 0.0 0.075919 0.807891 0.11619 MOTIF Midbrain_E13.5_H3K9ac_22_46_0.603_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.908162 0.091838 0.0 0.0 0.968438 0.0 0.031562 0.0 0.0 1.0 0.0 0.936814 0.0 0.0 0.063186 0.0 0.0 0.982212 0.017788 0.234593 0.375361 0.034114 0.355932 0.0 0.924771 0.054922 0.020307 0.025598 0.083268 0.871074 0.02006 0.0 0.10497 0.745589 0.14944