MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Neural-Tube_E11.5_H3K4me2_28_26_0.632_1.264571e-318
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.016727	0.055968	0.892351	0.034955
0.025552	0.0	0.953704	0.020744
0.034337	0.914342	0.016018	0.035303
0.019568	0.019039	0.925894	0.035499
0.251633	0.68867	0.035107	0.024589
0.036612	0.590166	0.067081	0.30614
0.008999	0.949188	0.0	0.041812
0.341713	0.596132	0.024081	0.038074
0.017204	0.930711	0.017958	0.034127
0.339208	0.034315	0.509925	0.116552
0.0	0.363875	0.117439	0.518685

MOTIF	Cranio-Facial_E11.5_H3K4me2_32_27_0.634_6.076729e-313
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.030895	0.864928	0.067331	0.036846
0.012066	0.0	0.945318	0.042616
0.15029	0.019543	0.584911	0.245257
0.009129	0.049894	0.580611	0.360366
0.051187	0.011634	0.91489	0.022289
0.088656	0.00507	0.870308	0.035966
0.210974	0.771869	0.0	0.017157
0.026087	0.0	0.964208	0.009705
0.060031	0.889269	0.0	0.0507
0.0	0.715121	0.0	0.284879

MOTIF	Kidney_E14.5_H3K4me2_13_16_0.662_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.224919	0.319937	0.037188	0.417956
0.056716	0.819062	0.021459	0.102763
0.137149	0.018193	0.748174	0.096484
0.019191	0.02053	0.80952	0.150759
0.080036	0.027609	0.84046	0.051895
0.176648	0.015088	0.685536	0.122728
0.067441	0.072181	0.80964	0.050738
0.032238	0.939946	0.02275	0.005066
0.004625	0.005871	0.96542	0.024084
0.029538	0.880803	0.0	0.089659

MOTIF	Neural-Tube_E13.5_H3K4me2_13_7_0.646_2.758012e-312
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.014126	0.920206	0.027105	0.038563
0.008263	0.09306	0.893941	0.004737
0.112795	0.03565	0.713117	0.138438
0.129544	0.015915	0.835032	0.019509
0.038964	0.054156	0.858234	0.048646
0.296755	0.065883	0.459485	0.177877
0.115391	0.794426	0.07357	0.016613
0.039634	0.041982	0.880843	0.037541
0.012841	0.93669	0.017885	0.032584
0.324695	0.519105	0.0	0.1562
0.010652	0.3864	0.593938	0.00901

MOTIF	Forebrain_E11.5_H3K4me2_24_19_0.654_1.700583e-311
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.438415	0.216717	0.279173	0.065694
0.031248	0.85976	0.041297	0.067695
0.07917	0.857085	0.037813	0.025932
0.006908	0.059342	0.897214	0.036536
0.164437	0.0	0.800101	0.035463
0.017778	0.023042	0.927415	0.031765
0.459511	0.019932	0.475471	0.045085
0.051154	0.02507	0.907405	0.016371
0.25136	0.69731	0.027138	0.024192
0.0	0.012926	0.965933	0.021141

MOTIF	Cranio-Facial_E14.5_H3K4me2_9_10_0.652_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.100243	0.244282	0.385731	0.269744
0.024976	0.926485	0.014563	0.033976
0.094451	0.782426	0.046829	0.076294
0.0199	0.057528	0.888311	0.034262
0.118176	0.066902	0.723225	0.091697
0.073458	0.040801	0.823538	0.062203
0.247282	0.039121	0.576904	0.136693
0.046877	0.050123	0.87234	0.03066
0.103911	0.796945	0.027252	0.071892
0.024707	0.049521	0.884964	0.040808

MOTIF	Intestine_E16.5_H3K4me2_36_24_0.608_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.021594	0.946449	0.008427	0.02353
0.110928	0.791715	0.037308	0.060049
0.025641	0.060946	0.724193	0.189219
0.1332	0.057823	0.70808	0.100898
0.012497	0.036665	0.856525	0.094313
0.085891	0.017801	0.792818	0.10349
0.163922	0.038612	0.713814	0.083652
0.13201	0.805711	0.036702	0.025577
0.021725	0.051913	0.869693	0.056669

MOTIF	Limb_E13.5_H3K4me2_32_40_0.600_1.067455e-312
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.148778	0.735562	0.0	0.115659
0.254974	0.680553	0.012409	0.052064
0.009437	0.042063	0.897752	0.050749
0.07119	0.035446	0.831811	0.061552
0.0	0.053278	0.905099	0.041623
0.109748	0.0	0.844096	0.046156
0.064412	0.0	0.837634	0.097955
0.373212	0.61869	0.0	0.008098
0.010698	0.051249	0.920759	0.017295

MOTIF	Forebrain_E13.5_H3K4me2_39_25_0.586_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.02583	0.936611	0.0	0.037559
0.0	0.80789	0.074034	0.118076
0.21204	0.019917	0.719068	0.048974
0.033474	0.047708	0.77152	0.147298
0.053492	0.042823	0.747785	0.155901
0.035496	0.027667	0.895161	0.041676
0.032652	0.038856	0.897227	0.031265
0.179865	0.594938	0.021775	0.203421
0.008245	0.012773	0.952832	0.02615

MOTIF	Heart_E13.5_H3K4me2_31_12_0.580_0
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.026225	0.925996	0.011878	0.0359
0.086705	0.836371	0.006734	0.07019
0.006875	0.093516	0.852728	0.046881
0.183684	0.019697	0.718498	0.078121
0.10541	0.057788	0.771087	0.065715
0.07428	0.033273	0.753755	0.138691
0.044381	0.054638	0.732721	0.168259
0.158729	0.775527	0.025949	0.039795
0.022009	0.041744	0.870412	0.065835
0.600472	0.381216	0.0	0.018312
0.0	0.310123	0.673685	0.016193

MOTIF	Lung_E14.5_H3K4me2_21_13_0.610_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.022843	0.947839	0.0	0.029318
0.026142	0.95557	0.006056	0.012233
0.015591	0.050127	0.889943	0.044339
0.046455	0.050903	0.760498	0.142143
0.209962	0.035748	0.59924	0.15505
0.068336	0.029464	0.755701	0.146499
0.057825	0.033662	0.880021	0.028492
0.293928	0.631108	0.047478	0.027486
0.033872	0.029442	0.891889	0.044797
0.683426	0.252719	0.0	0.063855

MOTIF	Midbrain_E16.5_H3K4me2_28_14_0.623_2.826055e-321
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.019152	0.915321	0.048679	0.016847
0.054122	0.91582	0.017039	0.013019
0.075114	0.051321	0.851329	0.022236
0.037906	0.01579	0.872518	0.073787
0.210634	0.041975	0.63938	0.108011
0.043001	0.026821	0.908056	0.022122
0.234305	0.023204	0.610218	0.132272
0.063833	0.866683	0.043124	0.026359
0.028185	0.063266	0.780756	0.127794
0.377675	0.379441	0.0	0.242883

MOTIF	Liver_E16.5_H3K4me3_46_25_0.610_5.974381e-309
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.005134	0.664984	0.028347	0.301534
0.082197	0.02722	0.793521	0.097062
0.042076	0.0	0.911956	0.045968
0.016041	0.0	0.636496	0.347463
0.047236	0.002583	0.927219	0.022962
0.087236	0.0	0.859041	0.053722
0.055162	0.927708	0.0	0.017131
0.037091	0.0	0.958372	0.004537
0.015253	0.892722	0.0	0.092026
0.500181	0.155057	0.05234	0.292422

MOTIF	Heart_E12.5_H3K4me3_10_27_0.691_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.233565	0.62607	0.014054	0.126311
0.156857	0.03722	0.707024	0.098899
0.006231	0.026341	0.843331	0.124097
0.101908	0.02138	0.807263	0.069449
0.068494	0.037726	0.87053	0.023249
0.079182	0.072558	0.626384	0.221877
0.015725	0.978081	0.0	0.006194
0.026381	0.0	0.954477	0.019142
0.005531	0.901706	0.0	0.092763
0.0	0.431689	0.313132	0.255179

MOTIF	Limb_E14.5_H3K4me3_24_17_0.688_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.149603	0.781856	0.068541	0.0
0.193412	0.057485	0.681891	0.067212
0.167877	0.038344	0.706028	0.087751
0.070888	0.048012	0.847909	0.03319
0.242154	0.031434	0.713945	0.012467
0.157463	0.045279	0.774156	0.023102
0.099688	0.87543	0.017045	0.007838
0.015925	0.0	0.958096	0.025979
0.027117	0.888676	0.023698	0.060509
0.146641	0.334013	0.0	0.519346

MOTIF	Limb_E13.5_H3K4me3_15_19_0.695_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.159131	0.606412	0.071644	0.162814
0.113939	0.039597	0.75311	0.093354
0.200747	0.024527	0.647734	0.126992
0.031145	0.025725	0.90134	0.041789
0.04543	0.024714	0.858168	0.071688
0.062478	0.043112	0.741276	0.153134
0.031133	0.94186	0.022277	0.00473
0.013666	0.006611	0.9492	0.030523
0.023427	0.931206	0.0	0.045367
0.159157	0.148613	0.143771	0.548459

MOTIF	Midbrain_P0_H3K4me3_16_16_0.718_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.108928	0.663413	0.047874	0.179786
0.065551	0.045008	0.808883	0.080558
0.031049	0.042524	0.770483	0.155945
0.037659	0.019198	0.91214	0.031003
0.241676	0.036917	0.640821	0.080586
0.048206	0.061476	0.71667	0.173648
0.045929	0.90589	0.036186	0.011995
0.02549	0.028651	0.920171	0.025688
0.014747	0.927761	0.005114	0.052378
0.090448	0.116599	0.245145	0.547808

MOTIF	Neural-Tube_E15.5_H3K4me3_31_31_0.662_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.179522	0.794989	0.0	0.02549
0.0	0.0	0.961759	0.038241
0.023485	0.059535	0.857798	0.059182
0.0	0.0	0.92624	0.07376
0.159216	0.023824	0.753224	0.063736
0.101626	0.0	0.878926	0.019448
0.403588	0.573241	0.0	0.023171
0.0	0.0	1.0	0.0
0.169436	0.662587	0.0	0.167978

MOTIF	Hindbrain_E11.5_H3K9ac_21_10_0.622_4.064545e-309
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.045363	0.819455	0.126646	0.008535
0.035418	0.006084	0.934601	0.023897
0.023375	0.925219	0.024635	0.026771
0.094509	0.026189	0.713428	0.165874
0.141059	0.5052	0.057628	0.296114
0.016395	0.920355	0.016677	0.046573
0.046176	0.869836	0.027088	0.0569
0.192037	0.714405	0.064658	0.0289
0.013861	0.908197	0.041761	0.036181
0.224016	0.028944	0.612682	0.134358
0.466731	0.359167	0.135072	0.039031
0.356846	0.541457	0.088334	0.013363

MOTIF	Liver_P0_H3K27me3_7_12_0.576_5.319637e-129
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.115637	0.685368	0.006436	0.192558
0.038256	0.066953	0.852768	0.042023
0.112587	0.069423	0.740873	0.077117
0.131864	0.052519	0.790983	0.024634
0.141206	0.002452	0.790615	0.065727
0.208246	0.052577	0.713514	0.025663
0.031432	0.919377	0.020715	0.028475
0.024212	0.03504	0.820145	0.120603
0.052588	0.896366	0.028511	0.022536
0.063497	0.070268	0.516447	0.349788
0.321661	0.074448	0.135152	0.468739

MOTIF	Cranio-Facial_E11.5_H3K27me3_5_16_0.599_1.005094e-52
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.109598	0.810989	0.046382	0.033031
0.02463	0.099783	0.745872	0.129715
0.190539	0.033995	0.643153	0.132314
0.046634	0.016059	0.908666	0.028641
0.045198	0.03623	0.79209	0.126483
0.238465	0.02612	0.627779	0.107636
0.042579	0.922582	0.01092	0.023919
0.034256	0.066292	0.812066	0.087385
0.011353	0.95802	0.0	0.030628

MOTIF	Hindbrain_E14.5_H3K27me3_11_12_0.554_1.975627e-71
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.024585	0.940564	0.026126	0.008726
0.096598	0.051705	0.692475	0.159222
0.134612	0.031495	0.738327	0.095567
0.07451	0.005335	0.873475	0.04668
0.088514	0.013789	0.766363	0.131334
0.176521	0.037519	0.685129	0.100831
0.046218	0.937864	0.003435	0.012483
0.033599	0.018749	0.796544	0.151108
0.0125	0.972195	0.0	0.015306
0.142274	0.346617	0.304551	0.206558

MOTIF	Midbrain_E14.5_H3K27me3_11_12_0.545_1.123497e-65
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.111189	0.833182	0.011099	0.04453
0.069874	0.050402	0.751876	0.127849
0.132406	0.059985	0.702167	0.105442
0.037056	0.01346	0.869914	0.079571
0.169357	0.048127	0.720653	0.061863
0.150479	0.053481	0.681397	0.114643
0.037363	0.929571	0.007646	0.025421
0.039296	0.046633	0.828192	0.085879
0.012588	0.961199	0.009517	0.016696
0.120794	0.34051	0.255903	0.282793

MOTIF	Intestine_E15.5_H3K9ac_14_9_0.644_6.333717e-309
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.004374	0.578678	0.1723	0.244648
0.116529	0.48327	0.137745	0.262456
0.019929	0.885853	0.021414	0.072804
0.016679	0.927606	0.036385	0.01933
0.022144	0.022757	0.929587	0.025513
0.178388	0.004541	0.668351	0.14872
0.053894	0.025077	0.776695	0.144334
0.043114	0.292664	0.625622	0.0386
0.191732	0.010562	0.733985	0.063722
0.052121	0.883465	0.044935	0.019479
0.029423	0.054955	0.844704	0.070918
0.32685	0.0	0.439669	0.23348

MOTIF	Intestine_P0_H3K9ac_42_19_0.592_9.286913e-154
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.008282	0.471619	0.077895	0.442204
0.234622	0.338206	0.046129	0.381043
0.027061	0.915323	0.030502	0.027114
0.0	0.938572	0.017495	0.043933
0.080721	0.063529	0.54982	0.30593
0.198419	0.040588	0.746511	0.014483
0.007123	0.049091	0.817476	0.126309
0.041879	0.040808	0.89953	0.017782
0.272001	0.042248	0.646031	0.03972
0.158323	0.82165	0.0	0.020027
0.004976	0.009592	0.932848	0.052584

MOTIF	Heart_E16.5_H3K9ac_22_21_0.579_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.160907	0.797885	0.025238	0.015969
0.046396	0.02398	0.846673	0.082952
0.064094	0.011208	0.86716	0.057538
0.081013	0.006477	0.885521	0.026988
0.159004	0.012233	0.81657	0.012193
0.459743	0.033046	0.408882	0.098329
0.122317	0.854073	0.016907	0.006704
0.030054	0.010793	0.845828	0.113325
0.009557	0.958115	0.0	0.032329

MOTIF	Liver_E12.5_H3K9ac_15_21_0.599_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.057978	0.807429	0.0	0.134594
0.036915	0.909197	0.010544	0.043343
0.046102	0.055072	0.758335	0.140491
0.029372	0.006267	0.94633	0.018031
0.055955	0.0417	0.739389	0.162956
0.202709	0.014157	0.621942	0.161193
0.048691	0.080706	0.674021	0.196582
0.022032	0.92116	0.023491	0.033318
0.030906	0.042152	0.907237	0.019705

MOTIF	Intestine_E16.5_H3K9ac_24_26_0.579_2.10943e-312
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.018519	0.831715	0.0	0.149766
0.132935	0.71321	0.128494	0.025362
0.027759	0.047192	0.660588	0.264461
0.066661	0.025347	0.871136	0.036855
0.022886	0.018292	0.867685	0.091137
0.03459	0.024191	0.934079	0.007141
0.24998	0.0	0.553167	0.196853
0.054768	0.913516	0.010676	0.021039
0.036769	0.0	0.877696	0.085535

MOTIF	Midbrain_E11.5_H3K9ac_36_21_0.598_7.10861e-312
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.076371	0.869579	0.008484	0.045566
0.161499	0.775725	0.026004	0.036772
0.024076	0.080108	0.715577	0.180239
0.173582	0.012054	0.80363	0.010735
0.02543	0.033079	0.799986	0.141505
0.06508	0.009527	0.910293	0.0151
0.2406	0.019658	0.647769	0.091973
0.058505	0.895385	0.028273	0.017837
0.020114	0.0	0.926351	0.053534
0.349981	0.486476	0.0	0.163543