MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Cranio-Facial_E15.5_H3K4me1_32_39_0.525_4.576997e-47
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	1.0	0.0	0.0
0.265704	0.0	0.715404	0.018892
0.039158	0.01781	0.938676	0.004356
0.051377	0.003107	0.884919	0.060597
0.04349	0.024386	0.926508	0.005616
0.942472	0.057528	0.0	0.0
0.019698	0.048745	0.911027	0.02053
0.090739	0.886182	0.0	0.023079
0.13128	0.80242	0.0	0.0663

MOTIF	Kidney_E16.5_H3K4me1_77_57_0.509_2.816641e-19
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.01156	0.971542	0.00682	0.010078
0.822381	0.018219	0.12589	0.03351
0.013727	0.432826	0.553446	0.0
0.093211	0.028188	0.443586	0.435015
0.01218	0.004321	0.97508	0.008419
0.902185	0.020428	0.030604	0.046783
0.014302	0.070424	0.913524	0.00175
0.047659	0.837508	0.086261	0.028572
0.0	0.881331	0.052722	0.065948
0.061444	0.034802	0.52785	0.375904

MOTIF	Limb_E11.5_H3K4me1_56_42_0.519_6.243399e-41
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.128875	0.124496	0.028727	0.717902
0.008045	0.981866	0.005691	0.004398
0.759884	0.05366	0.10714	0.079316
0.003233	0.255246	0.733527	0.007995
0.190536	0.015663	0.635267	0.158534
0.074796	0.006963	0.901637	0.016604
0.910197	0.019591	0.026036	0.044176
0.019124	0.229365	0.748447	0.003064
0.078119	0.886891	0.028812	0.006178
0.020334	0.874187	0.052956	0.052523
0.0	0.019854	0.65482	0.325326

MOTIF	Midbrain_E13.5_H3K4me1_87_52_0.509_1.133105e-28
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.013451	0.150074	0.456912	0.379563
0.074209	0.249109	0.074462	0.60222
0.002041	0.988677	0.004576	0.004706
0.826077	0.04873	0.073902	0.051292
0.002382	0.301134	0.684679	0.011805
0.045311	0.122483	0.559422	0.272784
0.049635	0.013846	0.917218	0.019301
0.890788	0.020658	0.024873	0.063682
0.029558	0.208014	0.759715	0.002714
0.067405	0.825532	0.062387	0.044676
0.119028	0.828503	0.037178	0.015291

MOTIF	Forebrain_E16.5_H3K4me1_51_38_0.521_4.176187e-43
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.868858	0.052892	0.07825	0.0
0.028847	0.044655	0.80459	0.121908
0.053638	0.023621	0.866127	0.056615
0.046084	0.0	0.953916	0.0
0.983746	0.016254	0.0	0.0
0.059933	0.052842	0.887225	0.0
0.080523	0.876864	0.032907	0.009706
0.277163	0.631807	0.052937	0.038094
0.090879	0.0	0.849266	0.059855

MOTIF	Hindbrain_P0_H3K4me1_48_57_0.520_1.027819e-19
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.076644	0.881685	0.016477	0.025195
0.719979	0.050784	0.186278	0.042959
0.031573	0.02135	0.934862	0.012216
0.067823	0.038958	0.73932	0.1539
0.105173	0.0	0.890095	0.004731
0.906271	0.038681	0.014448	0.040599
0.205408	0.20278	0.588162	0.00365
0.060653	0.902542	0.005766	0.031038
0.05041	0.837413	0.038428	0.07375
0.277158	0.054085	0.631344	0.037412

MOTIF	Limb_E15.5_H3K4me1_60_42_0.516_8.819874e-28
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.029535	0.908877	0.005878	0.05571
0.605397	0.049183	0.282571	0.062849
0.027113	0.046129	0.926758	0.0
0.024176	0.001077	0.717038	0.257709
0.033349	0.006979	0.948497	0.011175
0.960202	0.002497	0.0	0.037301
0.086653	0.345141	0.561711	0.006495
0.074288	0.829645	0.039408	0.056658
0.062217	0.801468	0.045128	0.091187
0.125396	0.020107	0.854497	0.0

MOTIF	Limb_E13.5_H3K4me1_60_27_0.517_5.50233e-36
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.007741	0.922723	0.047673	0.021862
0.606426	0.041553	0.12629	0.225732
0.031215	0.195633	0.760658	0.012494
0.079584	0.060013	0.675861	0.184542
0.036861	0.007585	0.948737	0.006817
0.801336	0.144104	0.016515	0.038045
0.054553	0.035145	0.877292	0.033009
0.059363	0.8679	0.047112	0.025625
0.065591	0.852121	0.025614	0.056673
0.335507	0.027749	0.497971	0.138772

MOTIF	Hindbrain_E15.5_H3K4me1_30_36_0.531_2.081571e-68
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.013996	0.938931	0.026036	0.021037
0.765471	0.06321	0.1563	0.015019
0.012494	0.227287	0.760219	0.0
0.031241	0.104228	0.654569	0.209962
0.074394	0.005512	0.912534	0.007559
0.908105	0.04343	0.007426	0.041038
0.180498	0.059176	0.753838	0.006487
0.062942	0.878016	0.040623	0.018419
0.05177	0.735432	0.05135	0.161448
0.018581	0.103589	0.718562	0.159268

MOTIF	Neural-Tube_E13.5_H3K4me1_47_91_0.520_1.56628e-54
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.00781	0.964696	0.027494	0.0
0.705839	0.043731	0.127113	0.123317
0.019043	0.024373	0.950187	0.006397
0.0076	0.170009	0.57035	0.252041
0.031796	0.0	0.968204	0.0
0.880142	0.043717	0.029872	0.046269
0.261507	0.041869	0.691449	0.005175
0.031565	0.866891	0.075259	0.026285
0.210706	0.724622	0.023675	0.040997

MOTIF	Heart_E13.5_H3K4me3_75_75_0.570_7.11561e-173
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.014925	0.90727	0.040667	0.037139
0.019296	0.062491	0.812036	0.106177
0.036139	0.054997	0.801666	0.107197
0.257507	0.007441	0.725054	0.009997
0.155169	0.012309	0.829072	0.00345
0.961445	0.015002	0.0	0.023553
0.084593	0.076502	0.82344	0.015465
0.276192	0.690899	0.025509	0.0074
0.056817	0.766405	0.063357	0.113421
0.645004	0.040263	0.314733	0.0

MOTIF	Heart_E14.5_H3K4me3_70_77_0.561_4.39234e-116
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.017609	0.95041	0.013206	0.018775
0.025568	0.0	0.744592	0.229839
0.008037	0.053752	0.908754	0.029457
0.256188	0.017502	0.643685	0.082625
0.060013	0.032739	0.907248	0.0
0.947451	0.004295	0.011148	0.037106
0.124471	0.074748	0.710834	0.089947
0.178501	0.746158	0.04707	0.028271
0.019034	0.860942	0.013275	0.106748
0.546359	0.0	0.428886	0.024755

MOTIF	Lung_E14.5_H3K4me3_51_79_0.625_7.4663e-318
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.041725	0.934238	0.0	0.024038
0.045545	0.0	0.912233	0.042221
0.068753	0.0	0.914222	0.017025
0.016877	0.03905	0.750617	0.193456
0.345147	0.01443	0.637719	0.002704
0.860438	0.028112	0.032441	0.079009
0.019948	0.021165	0.782323	0.176565
0.151176	0.764991	0.060633	0.0232
0.071378	0.749769	0.089617	0.089236
0.41578	0.087442	0.496778	0.0

MOTIF	Hindbrain_E15.5_H3K4me2_68_25_0.555_2.808633e-85
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.0	0.0	1.0
0.022831	0.045376	0.844388	0.087405
0.02643	0.955346	0.0	0.018223
0.22368	0.037107	0.685263	0.05395
0.007506	0.066601	0.91761	0.008283
0.24528	0.04697	0.565889	0.141861
0.048019	0.014207	0.93445	0.003325
0.809781	0.064924	0.018871	0.106424
0.105817	0.044574	0.802475	0.047133
0.047504	0.861077	0.069877	0.021542

MOTIF	Midbrain_E11.5_H3K4me2_90_81_0.535_9.981026e-42
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.021575	0.944373	0.034052	0.0
0.076077	0.073822	0.082687	0.767415
0.008469	0.031776	0.939707	0.020048
0.011233	0.933975	0.03743	0.017362
0.337611	0.008914	0.348177	0.305298
0.108686	0.016971	0.874343	0.0
0.03387	0.045003	0.843853	0.077273
0.094362	0.012992	0.878871	0.013776
0.848476	0.028974	0.041798	0.080751
0.299611	0.197325	0.493723	0.00934

MOTIF	Kidney_E16.5_H3K4me2_77_54_0.534_7.382647e-42
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.004213	0.823593	0.043961	0.128233
0.477362	0.24897	0.172324	0.101344
0.008844	0.969715	0.021441	0.0
0.216346	0.038913	0.062839	0.681902
0.009504	0.068311	0.910549	0.011635
0.025301	0.837129	0.018132	0.119438
0.11922	0.010745	0.760331	0.109704
0.091411	0.038462	0.741472	0.128655
0.168971	0.00999	0.614941	0.206097
0.037524	0.026658	0.924492	0.011326
0.849676	0.086624	0.014998	0.048703
0.049494	0.59241	0.314152	0.043944

MOTIF	Heart_E13.5_H3K4me2_59_74_0.536_4.542574e-205
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.007183	0.967272	0.025544	0.0
0.055464	0.017371	0.061706	0.865459
0.02313	0.055078	0.826016	0.095776
0.044994	0.78863	0.051911	0.114465
0.057854	0.107087	0.794399	0.040659
0.175088	0.082829	0.568304	0.17378
0.016421	0.017354	0.811252	0.154974
0.144415	0.053311	0.794321	0.007952
0.925121	0.0	0.018594	0.056284

MOTIF	Hindbrain_E16.5_H3K4me2_54_69_0.583_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.977616	0.022384	0.0
0.079004	0.059205	0.022135	0.839656
0.012161	0.113717	0.857791	0.016332
0.030761	0.919561	0.0	0.049678
0.036281	0.040675	0.891165	0.031878
0.0	0.169514	0.669857	0.160629
0.266516	0.014497	0.560396	0.158591
0.010687	0.0437	0.945613	0.0
0.733976	0.026591	0.0	0.239433

MOTIF	Midbrain_E14.5_H3K4me2_86_98_0.531_1.103739e-82
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.937944	0.062056	0.0
0.079514	0.077963	0.009152	0.833371
0.01291	0.119988	0.837314	0.029788
0.029857	0.639557	0.050144	0.280442
0.029345	0.0	0.926466	0.044189
0.008827	0.039946	0.787208	0.164019
0.298207	0.005399	0.616259	0.080135
0.133851	0.020019	0.84241	0.00372
0.791612	0.026765	0.042266	0.139356

MOTIF	Midbrain_E11.5_H3K9ac_58_22_0.562_3.578219e-135
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.004601	0.917662	0.048533	0.029203
0.0229	0.00805	0.064938	0.904112
0.008655	0.787232	0.160892	0.043221
0.080287	0.748093	0.055821	0.1158
0.062391	0.774987	0.079799	0.082824
0.058245	0.748163	0.060294	0.133298
0.040442	0.013224	0.800933	0.145402
0.006394	0.762229	0.182844	0.048533
0.129882	0.774256	0.059716	0.036147

MOTIF	Hindbrain_E11.5_H3K9ac_48_20_0.573_2.907985e-185
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.042048	0.801595	0.12814	0.028217
0.032327	0.020392	0.014644	0.932637
0.00833	0.898585	0.040456	0.052629
0.055665	0.746189	0.068641	0.129505
0.051044	0.842143	0.077535	0.029279
0.067099	0.599665	0.2019	0.131337
0.044687	0.022019	0.889636	0.043658
0.018564	0.749311	0.184731	0.047395
0.106247	0.677545	0.14499	0.071218

MOTIF	Midbrain_E14.5_H3K9ac_34_12_0.587_1.213482e-285
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.018305	0.864695	0.080825	0.036174
0.03365	0.017839	0.031064	0.917448
0.004146	0.827941	0.120268	0.047645
0.055654	0.793126	0.055795	0.095425
0.051373	0.797395	0.073802	0.077431
0.055466	0.676282	0.14112	0.127132
0.086003	0.034355	0.807333	0.072309
0.024956	0.78587	0.15255	0.036623
0.049849	0.728673	0.122597	0.098882
0.186076	0.0	0.630704	0.18322

MOTIF	Midbrain_E15.5_H3K9ac_38_19_0.607_3.706153e-281
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.012467	0.835655	0.117966	0.033912
0.029783	0.038148	0.01389	0.918179
0.023575	0.889665	0.051068	0.035692
0.080811	0.684372	0.086972	0.147845
0.075527	0.789808	0.053425	0.081241
0.046316	0.666255	0.19455	0.09288
0.0922	0.015633	0.847186	0.044981
0.027461	0.785682	0.164986	0.021871
0.041793	0.794864	0.072372	0.090972
0.201533	0.0	0.535828	0.262639

MOTIF	Heart_E11.5_H3K9ac_32_27_0.566_6.051955e-261
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.018183	0.014403	0.936152	0.031262
0.033481	0.924158	0.009375	0.032986
0.046077	0.047207	0.854299	0.052417
0.069077	0.052779	0.85359	0.024554
0.234908	0.030927	0.615335	0.118829
0.020432	0.033674	0.926455	0.019439
0.861161	0.013614	0.06877	0.056455
0.11208	0.244343	0.635408	0.008169
0.192358	0.670999	0.044585	0.092058

MOTIF	Hindbrain_E12.5_H3K9ac_55_50_0.562_1.852686e-133
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.014358	0.057559	0.904847	0.023236
0.016224	0.853064	0.035731	0.094981
0.026192	0.02528	0.718059	0.230469
0.019402	0.060358	0.895919	0.024321
0.221346	0.025461	0.636044	0.117149
0.023826	0.044609	0.928717	0.002849
0.854289	0.021449	0.024966	0.099296
0.132979	0.035044	0.782154	0.049823
0.182167	0.679502	0.111719	0.026612

MOTIF	Forebrain_E12.5_H3K9ac_35_36_0.590_2.368727e-239
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.013914	0.041018	0.816681	0.128387
0.049997	0.852274	0.019551	0.078178
0.043177	0.030761	0.861565	0.064497
0.019832	0.05042	0.911508	0.01824
0.167104	0.042493	0.661227	0.129177
0.256998	0.022162	0.705313	0.015527
0.843766	0.012332	0.020201	0.123701
0.121754	0.040273	0.780954	0.057019
0.058074	0.831124	0.089567	0.021236
0.121741	0.276879	0.32667	0.27471

MOTIF	Midbrain_E12.5_H3K9ac_41_32_0.583_4.488096e-236
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.01337	0.029212	0.93466	0.022759
0.126087	0.749805	0.017012	0.107097
0.067981	0.035102	0.852001	0.044916
0.026055	0.034537	0.910612	0.028796
0.241261	0.030157	0.6172	0.111383
0.063249	0.01619	0.904473	0.016088
0.872352	0.028566	0.039645	0.059437
0.102755	0.074029	0.812419	0.010797
0.18637	0.736799	0.032017	0.044815
0.086674	0.33714	0.381166	0.195021

MOTIF	Midbrain_E13.5_H3K9ac_38_38_0.576_1.791753e-305
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.028362	0.052666	0.894195	0.024777
0.026566	0.842145	0.011608	0.11968
0.026056	0.049178	0.867714	0.057052
0.019925	0.070377	0.838491	0.071207
0.195424	0.035233	0.617402	0.151941
0.181032	0.023684	0.777536	0.017748
0.877169	0.028434	0.028049	0.066348
0.024683	0.225764	0.661215	0.088338
0.031717	0.901582	0.038172	0.028529

MOTIF	Midbrain_P0_H3K9ac_48_24_0.572_1.660132e-124
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.026173	0.026063	0.931634	0.01613
0.014874	0.854014	0.007975	0.123138
0.161152	0.032396	0.746539	0.059912
0.014516	0.059716	0.905598	0.020169
0.23994	0.054775	0.565317	0.139969
0.033084	0.045007	0.895425	0.026484
0.880334	0.0	0.033164	0.086503
0.025619	0.070716	0.838124	0.065541
0.217908	0.694437	0.078859	0.008797
0.08932	0.50618	0.127212	0.277288
0.572165	0.006035	0.404508	0.017292