MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Cranio-Facial_E14.5_H3K4me2_79_64_0.539_2.312272e-110
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.037267	0.028367	0.92801	0.006357
0.010764	0.010821	0.978415	0.0
0.852884	0.063529	0.045494	0.038093
0.193381	0.078866	0.603611	0.124142
0.035886	0.8555	0.032266	0.076349
0.009687	0.620048	0.030623	0.339641
0.05644	0.024148	0.893187	0.026225
0.01137	0.017681	0.952299	0.018649
0.898034	0.0	0.074544	0.027422
0.407617	0.207897	0.327851	0.056635

MOTIF	Heart_E16.5_H3K4me2_76_40_0.518_3.909257e-81
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.018563	0.066695	0.911277	0.003465
0.143299	0.005429	0.848486	0.002786
0.942624	0.03185	0.02135	0.004176
0.166643	0.045508	0.713816	0.074033
0.14037	0.75193	0.065865	0.041835
0.027996	0.701187	0.07032	0.200497
0.098601	0.033147	0.782688	0.085563
0.002557	0.042304	0.945372	0.009767
0.845516	0.034714	0.044292	0.075478
0.167718	0.271898	0.560384	0.0
0.072351	0.029158	0.496629	0.401861

MOTIF	Midbrain_E15.5_H3K4me2_54_36_0.586_6.126878e-310
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.446521	0.368887	0.12411	0.060482
0.132185	0.0	0.847262	0.020554
0.023807	0.122121	0.850688	0.003384
0.914221	0.01148	0.023253	0.051046
0.257962	0.361865	0.356753	0.02342
0.047193	0.80757	0.083841	0.061396
0.040651	0.856689	0.040147	0.062514
0.037688	0.031907	0.883094	0.047311
0.0	0.014019	0.985981	0.0
0.820011	0.119895	0.0	0.060094

MOTIF	Intestine_E15.5_H3K4me2_41_84_0.583_8.507331e-296
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.765655	0.133548	0.070462	0.030336
0.048302	0.059896	0.74986	0.141942
0.014101	0.940229	0.04567	0.0
0.023403	0.956132	0.0	0.020465
0.088897	0.020672	0.890431	0.0
0.0	0.0	1.0	0.0
0.890874	0.039281	0.0	0.069845
0.289345	0.30563	0.405026	0.0
0.247142	0.032012	0.720845	0.0

MOTIF	Lung_P0_H3K4me2_69_92_0.531_7.910304e-203
letter-probability matrix: alength= 4 w= 7 nsites= 100 E= 1.0e-1
1.0	0.0	0.0	0.0
0.0	0.0	1.0	0.0
0.041697	0.917595	0.0	0.040708
0.0	0.919544	0.0	0.080456
0.120352	0.030088	0.827515	0.022044
0.0	0.0	1.0	0.0
0.549211	0.0	0.0	0.450789

MOTIF	Kidney_P0_H3K4me2_114_63_0.507_4.665882e-25
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.002798	0.805269	0.109018	0.082915
0.122837	0.067159	0.058938	0.751066
0.009469	0.937876	0.051361	0.001293
0.131059	0.604081	0.028109	0.236751
0.204361	0.047967	0.739147	0.008525
0.020796	0.073712	0.81415	0.091342
0.07009	0.844733	0.055514	0.029663
0.020261	0.020473	0.084638	0.874627
0.0	0.913719	0.049647	0.036635
0.015232	0.042445	0.097168	0.845155

MOTIF	Heart_P0_H3K4me2_81_56_0.528_8.117639e-123
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.002878	0.875443	0.025177	0.096502
0.103809	0.072286	0.044712	0.779193
0.001441	0.954963	0.043596	0.0
0.108895	0.577913	0.068224	0.244969
0.042807	0.038452	0.892991	0.02575
0.021509	0.033478	0.837057	0.107956
0.070097	0.806576	0.055577	0.06775
0.032632	0.03876	0.041039	0.88757
0.000612	0.749276	0.073078	0.177033
0.0	0.706052	0.103245	0.190703

MOTIF	Heart_E11.5_H3K4me2_79_52_0.535_1.298195e-174
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.817699	0.104377	0.077924
0.055861	0.023354	0.060984	0.859801
0.0	0.928873	0.064794	0.006333
0.030871	0.604167	0.099474	0.265488
0.034416	0.043088	0.911696	0.0108
0.044652	0.048486	0.810159	0.096704
0.070815	0.70639	0.08196	0.140835
0.016931	0.040643	0.042137	0.900289
0.0	0.798159	0.041153	0.160688
0.015916	0.418186	0.089123	0.476775

MOTIF	Hindbrain_E16.5_H3K4me2_84_73_0.531_1.220859e-70
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.856337	0.026463	0.117201
0.170462	0.0	0.060126	0.769412
0.001671	0.925947	0.0628	0.009583
0.033309	0.627224	0.02238	0.317088
0.042084	0.069272	0.880178	0.008466
0.014349	0.053519	0.916925	0.015207
0.14056	0.771768	0.058153	0.029519
0.028119	0.018083	0.046606	0.907193
0.0	0.73451	0.010808	0.254682
0.021184	0.28304	0.109479	0.586296

MOTIF	Kidney_E14.5_H3K4me2_85_58_0.532_3.183588e-60
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.074714	0.469249	0.128813	0.327224
0.002981	0.782956	0.050696	0.163367
0.0396	0.032204	0.062737	0.865459
0.00921	0.951893	0.035858	0.003038
0.076721	0.744061	0.047663	0.131556
0.270044	0.032481	0.654777	0.042698
0.013638	0.043643	0.843651	0.099068
0.079798	0.772593	0.055168	0.092441
0.033684	0.095175	0.041944	0.829197
0.0	0.87778	0.031754	0.090466
0.009506	0.411958	0.179104	0.399432

MOTIF	Midbrain_E14.5_H3K4me2_73_39_0.554_5.148488e-189
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.015733	0.735591	0.127592	0.121084
0.042221	0.082054	0.24703	0.628695
0.011241	0.956351	0.025385	0.007023
0.009347	0.902415	0.039142	0.049096
0.20414	0.031051	0.734028	0.030782
0.002161	0.043325	0.817154	0.137359
0.045814	0.773722	0.075083	0.105381
0.022643	0.032416	0.061307	0.883634
0.0	0.861375	0.037093	0.101531
0.018115	0.168572	0.18145	0.631863

MOTIF	Hindbrain_P0_H3K4me2_79_41_0.554_8.356254e-192
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.00202	0.870208	0.052047	0.075725
0.116269	0.047484	0.046831	0.789416
0.007732	0.934128	0.046228	0.011913
0.112407	0.675583	0.132909	0.0791
0.043379	0.039648	0.883517	0.033456
0.026904	0.066385	0.815598	0.091114
0.023212	0.775016	0.14873	0.053041
0.036698	0.02926	0.041474	0.892568
0.004952	0.706996	0.19648	0.091571
0.039285	0.339284	0.092507	0.528923

MOTIF	Stomach_E14.5_H3K4me2_85_50_0.529_8.085674e-81
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.002888	0.862983	0.070318	0.063811
0.11107	0.046634	0.070891	0.771405
0.005558	0.95049	0.038601	0.005351
0.159429	0.550681	0.104413	0.185478
0.146169	0.135796	0.708701	0.009334
0.064695	0.040124	0.716682	0.178498
0.016841	0.90646	0.048763	0.027937
0.029005	0.018665	0.050932	0.901398
0.0	0.939484	0.044155	0.016361
0.1664	0.282539	0.166674	0.384388

MOTIF	Forebrain_P0_H3K27ac_76_48_0.516_1.176338e-59
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.004469	0.938795	0.011836	0.0449
0.240649	0.008439	0.006108	0.744804
0.0	0.964997	0.018351	0.016652
0.0	0.938624	0.041719	0.019657
0.063785	0.018754	0.829018	0.088443
0.024017	0.004365	0.902852	0.068766
0.131119	0.388232	0.271985	0.208664
0.096662	0.024924	0.073066	0.805347
0.0	0.900798	0.030147	0.069055
0.148765	0.270889	0.335716	0.24463

MOTIF	Midbrain_E11.5_H3K27ac_85_32_0.512_3.114644e-17
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.050978	0.791765	0.110003	0.047254
0.114493	0.015411	0.08797	0.782127
0.009409	0.956254	0.022863	0.011474
0.020519	0.922441	0.033715	0.023325
0.176884	0.013823	0.78646	0.022834
0.015492	0.026774	0.918785	0.038949
0.109963	0.525156	0.263378	0.101502
0.070551	0.016537	0.06245	0.850462
0.013272	0.749076	0.005059	0.232593
0.132294	0.62768	0.084907	0.155118

MOTIF	Midbrain_E14.5_H3K27ac_56_44_0.526_9.962658e-68
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.013024	0.986976	0.0	0.0
0.369811	0.0	0.020092	0.610097
0.0	0.960435	0.039565	0.0
0.024968	0.850598	0.110149	0.014285
0.018099	0.324607	0.598516	0.058778
0.028988	0.0	0.946484	0.024528
0.016255	0.922526	0.03267	0.028549
0.023554	0.083552	0.016223	0.876671
0.0	0.756768	0.034254	0.208978

MOTIF	Liver_P0_H3K27me3_42_68_0.531_1.992362e-24
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.835961	0.062858	0.023137	0.078044
0.011269	0.099564	0.847162	0.042004
0.067596	0.722948	0.0	0.209456
0.0	0.823843	0.123962	0.052195
0.238142	0.020683	0.709606	0.031568
0.004574	0.0	0.993139	0.002288
0.670871	0.052678	0.019451	0.257
0.002585	0.095019	0.902397	0.0
0.008333	0.963731	0.015495	0.012441

MOTIF	Kidney_E16.5_H3K4me3_64_36_0.587_8.150453e-193
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.004436	0.832287	0.046994	0.116283
0.082797	0.083167	0.031986	0.80205
0.001704	0.827553	0.147376	0.023367
0.064326	0.806636	0.052732	0.076307
0.02881	0.072579	0.88349	0.01512
0.047566	0.043523	0.786586	0.122326
0.063015	0.617424	0.234618	0.084943
0.040568	0.057505	0.050762	0.851165
0.003395	0.851667	0.101016	0.043922
0.268237	0.042995	0.23369	0.455078
0.094749	0.461845	0.430914	0.012493

MOTIF	Midbrain_E13.5_H3K4me3_75_54_0.569_1.020086e-121
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.006294	0.84358	0.078737	0.071388
0.165327	0.024531	0.023297	0.786844
0.010501	0.899098	0.088018	0.002383
0.064147	0.838517	0.051602	0.045734
0.027998	0.044167	0.899088	0.028747
0.036787	0.037774	0.739994	0.185444
0.07624	0.703693	0.144539	0.075528
0.04582	0.018528	0.046813	0.888839
0.005296	0.828388	0.112551	0.053766
0.126571	0.0	0.21184	0.66159

MOTIF	Heart_E12.5_H3K4me3_79_83_0.542_3.621896e-65
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.851475	0.062762	0.068419	0.017345
0.004727	0.068448	0.821227	0.105599
0.056077	0.771029	0.067381	0.105513
0.01917	0.918113	0.026596	0.036122
0.225769	0.053512	0.619507	0.101212
0.0	0.044597	0.955403	0.0
0.853598	0.087959	0.013631	0.044812
0.007518	0.189915	0.801073	0.001495
0.279338	0.044338	0.59382	0.082505

MOTIF	Heart_E13.5_H3K4me3_99_91_0.518_2.957888e-38
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.001926	0.888734	0.087618	0.021722
0.051472	0.0	0.058432	0.890095
0.010543	0.9565	0.032957	0.0
0.131336	0.648006	0.025697	0.194961
0.263713	0.092352	0.634947	0.008988
0.020248	0.00487	0.874193	0.100688
0.018218	0.900975	0.049417	0.031389
0.007249	0.066072	0.018228	0.908451
0.002194	0.83588	0.062845	0.099081
0.258086	0.308113	0.126624	0.307177

MOTIF	Heart_E15.5_H3K4me3_81_60_0.538_8.073399e-114
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.004022	0.870882	0.093423	0.031672
0.135524	0.051191	0.11734	0.695945
0.00229	0.962614	0.033054	0.002042
0.159588	0.57621	0.018113	0.246089
0.040124	0.081559	0.857836	0.020481
0.017179	0.034163	0.808297	0.140361
0.016083	0.811798	0.083774	0.088346
0.004655	0.066353	0.051133	0.87786
0.0	0.877026	0.046687	0.076287
0.006009	0.201357	0.178865	0.613769

MOTIF	Limb_E13.5_H3K4me3_81_50_0.577_1.802427e-197
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.004082	0.927815	0.015593	0.052509
0.129785	0.037801	0.054725	0.777689
0.007776	0.951464	0.029028	0.011732
0.070316	0.823796	0.069315	0.036573
0.229946	0.034274	0.722201	0.013579
0.088806	0.063323	0.789965	0.057906
0.033456	0.692948	0.147625	0.125971
0.022162	0.066004	0.044493	0.867341
0.003568	0.74746	0.041241	0.207732
0.0	0.834684	0.126432	0.038884

MOTIF	Stomach_E14.5_H3K4me3_54_42_0.622_1.215401e-321
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.008807	0.902543	0.011585	0.077065
0.134998	0.037823	0.043381	0.783798
0.003871	0.957305	0.023248	0.015576
0.027338	0.796777	0.14335	0.032535
0.048996	0.050805	0.878001	0.022199
0.030755	0.046354	0.740082	0.182809
0.096874	0.714537	0.13374	0.05485
0.041724	0.040156	0.030324	0.887797
0.005761	0.719172	0.031456	0.243611
0.0	0.416319	0.140234	0.443447

MOTIF	Forebrain_E11.5_H3K4me3_61_39_0.606_5.359498e-208
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0024	0.904736	0.023709	0.069156
0.098701	0.076849	0.046844	0.777606
0.001966	0.860232	0.122968	0.014834
0.088674	0.716063	0.100932	0.094331
0.046232	0.049104	0.903607	0.001056
0.021369	0.028771	0.842651	0.107209
0.08503	0.744088	0.071732	0.099151
0.028358	0.085783	0.046122	0.839737
0.0	0.699543	0.082347	0.21811
0.0	0.604508	0.192792	0.2027

MOTIF	Limb_E12.5_H3K4me3_66_51_0.583_1.259698e-158
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.002103	0.828288	0.07392	0.095689
0.114964	0.020855	0.049724	0.814456
0.0	0.948091	0.04791	0.003999
0.143298	0.72391	0.075387	0.057405
0.04911	0.053175	0.886204	0.011511
0.022019	0.013197	0.870921	0.093862
0.056216	0.741223	0.078383	0.124178
0.023345	0.063485	0.046428	0.866742
0.001468	0.742184	0.080169	0.176179
0.0	0.772181	0.078922	0.148897

MOTIF	Heart_E14.5_H3K4me3_63_44_0.576_2.280451e-215
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.001835	0.784119	0.091174	0.122872
0.129174	0.077984	0.046077	0.746765
0.001289	0.962653	0.036058	0.0
0.102671	0.751638	0.025621	0.12007
0.042034	0.051063	0.886505	0.020398
0.068618	0.034819	0.794468	0.102094
0.073188	0.752921	0.05804	0.115851
0.016468	0.039538	0.09135	0.852644
0.0	0.781084	0.131326	0.08759

MOTIF	Neural-Tube_E13.5_H3K4me3_56_48_0.608_4.205242e-283
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.001999	0.838939	0.078263	0.080799
0.106995	0.077371	0.074894	0.740739
0.000701	0.949211	0.050088	0.0
0.11374	0.730309	0.107909	0.048042
0.03681	0.051708	0.906112	0.00537
0.022436	0.064771	0.79071	0.122084
0.054845	0.67278	0.159325	0.113049
0.02238	0.04304	0.058739	0.87584
0.003768	0.791865	0.051227	0.15314

MOTIF	Stomach_E16.5_H3K4me3_55_49_0.602_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.003881	0.807714	0.121872	0.066533
0.085721	0.026652	0.070515	0.817113
0.000501	0.895696	0.103803	0.0
0.08062	0.766166	0.098501	0.054713
0.041944	0.049707	0.888352	0.019996
0.030386	0.062491	0.808331	0.098792
0.055607	0.695285	0.163162	0.085947
0.039585	0.036573	0.073757	0.850085
0.003375	0.729012	0.128757	0.138856