MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Hindbrain_E16.5_H3K4me2_63_39_0.568_2.9053e-315 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.92453 0.027799 0.047671 0.030428 0.074518 0.635115 0.259939 0.0 0.94931 0.043128 0.007562 0.077432 0.0 0.090397 0.832171 0.0 0.794741 0.191199 0.014061 0.056154 0.008842 0.790221 0.144783 0.007891 0.035422 0.935173 0.021514 0.122987 0.821781 0.0 0.055232 0.05576 0.662141 0.030891 0.251207 MOTIF Intestine_P0_H3K4me2_56_55_0.557_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.884888 0.049031 0.06608 0.306722 0.046135 0.552777 0.094366 0.137934 0.039293 0.822773 0.0 0.110376 0.831907 0.057717 0.0 0.074781 0.686995 0.060985 0.177238 0.021682 0.10342 0.874898 0.0 0.941582 0.0 0.021938 0.03648 0.0 0.084756 0.915244 0.0 0.024919 0.830255 0.085835 0.058991 MOTIF Midbrain_E12.5_H3K4me2_26_28_0.617_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.92995 0.038282 0.031768 0.211535 0.026335 0.73024 0.03189 0.0 0.859555 0.140445 0.0 0.062948 0.048288 0.0 0.888765 0.0 0.973111 0.026889 0.0 0.031642 0.046806 0.856758 0.064794 0.007413 0.026781 0.848039 0.117767 0.026506 0.726651 0.046565 0.200277 0.0 0.726531 0.024377 0.249092 MOTIF Midbrain_E13.5_H3K4me2_76_81_0.552_7.686453e-197 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.05722 0.901499 0.041282 0.0 0.293956 0.033596 0.464049 0.208399 0.017583 0.039015 0.936085 0.007317 0.084053 0.88392 0.029523 0.002504 0.460421 0.481784 0.0 0.057795 0.026501 0.067216 0.897119 0.009165 0.881519 0.023413 0.037424 0.057645 0.081195 0.0 0.918805 0.0 0.02709 0.925814 0.047096 0.0 MOTIF Heart_E14.5_H3K4me3_66_69_0.575_5.6349e-208 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.816833 0.110246 0.072921 0.4152 0.043698 0.465787 0.075315 0.110347 0.045498 0.656536 0.18762 0.006526 0.959067 0.034407 0.0 0.225974 0.691438 0.031418 0.05117 0.0 0.073166 0.909798 0.017035 0.937007 0.0 0.041506 0.021487 0.0 0.0 1.0 0.0 0.0 0.872036 0.118654 0.00931 MOTIF Liver_P0_H3K4me3_37_31_0.628_7.039245e-318 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.0 0.542359 0.457641 0.0 0.468064 0.013488 0.419278 0.09917 0.016814 0.790018 0.122446 0.070722 0.352037 0.118073 0.520035 0.009854 0.278728 0.03352 0.549523 0.138229 0.007293 0.920285 0.070363 0.002059 0.018933 0.921647 0.033229 0.02619 0.019291 0.054813 0.925896 0.0 0.892524 0.029215 0.032131 0.046129 0.0 0.034325 0.965675 0.0 0.0 0.863252 0.136748 0.0 MOTIF Heart_E13.5_H3K4me3_35_30_0.643_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.01732 0.812708 0.040612 0.129359 0.143404 0.040406 0.808805 0.007384 0.177751 0.029458 0.732201 0.06059 0.072927 0.763942 0.163131 0.0 0.030867 0.884274 0.058891 0.025969 0.056683 0.018054 0.922388 0.002874 0.874681 0.029671 0.0 0.095648 0.0 0.088963 0.911037 0.0 0.090972 0.637887 0.05138 0.21976 MOTIF Liver_E13.5_H3K4me3_42_56_0.587_1.003356e-315 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.814718 0.155228 0.030054 0.264922 0.0 0.676224 0.058854 0.022495 0.012645 0.816904 0.147956 0.114663 0.806167 0.072419 0.006752 0.033995 0.700461 0.046825 0.218719 0.013047 0.051312 0.928988 0.006653 0.884503 0.02514 0.031984 0.058374 0.0 0.1218 0.8725 0.0057 0.014462 0.824388 0.025804 0.135346 MOTIF Midbrain_E14.5_H3K4me3_59_45_0.610_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.112595 0.659335 0.016081 0.21199 0.16462 0.034932 0.766758 0.033689 0.021109 0.032539 0.939633 0.006719 0.007282 0.943341 0.049377 0.0 0.260527 0.603585 0.039392 0.096496 0.004107 0.050504 0.945389 0.0 0.800598 0.076013 0.03183 0.091559 0.011522 0.0 0.988478 0.0 0.23765 0.660298 0.035767 0.066285 MOTIF Heart_E16.5_H3K4me3_3_33_0.689_5.316146e-321 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.925513 0.074487 0.0 0.0 0.068004 0.931996 0.0 0.079609 0.736125 0.03024 0.154026 0.15754 0.091202 0.725998 0.025261 0.251772 0.029887 0.642312 0.076029 0.015516 0.715124 0.07537 0.19399 0.059652 0.820121 0.084046 0.036181 0.0 0.0 0.986511 0.013489 0.882377 0.0 0.0 0.117623 MOTIF Intestine_E16.5_H3K4me3_7_21_0.697_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.311515 0.0 0.0 0.688485 0.0 0.991115 0.0 0.008885 0.032241 0.0161 0.942691 0.008968 0.120891 0.033795 0.796475 0.048839 0.136813 0.588314 0.0 0.274874 0.142186 0.710204 0.133313 0.014298 0.034076 0.063525 0.902399 0.0 0.006375 0.774118 0.034609 0.184898 0.0 0.122533 0.856253 0.021214 MOTIF Lung_E15.5_H3K4me3_16_40_0.700_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.129015 0.632192 0.080061 0.158732 0.11211 0.023721 0.80535 0.058819 0.030227 0.796322 0.0 0.173451 0.086457 0.081742 0.82154 0.010261 0.004995 0.044047 0.91923 0.031728 0.168352 0.742882 0.068667 0.0201 0.048785 0.918465 0.0 0.03275 0.022076 0.0 0.866639 0.111285 0.868089 0.0 0.0 0.131911 MOTIF Cranio-Facial_E12.5_H3K4me3_35_18_0.673_6.737079e-320 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.0 0.541047 0.176324 0.28263 0.0 0.962492 0.029307 0.008201 0.061578 0.074388 0.016756 0.847278 0.0 0.90433 0.09567 0.0 0.07844 0.031619 0.699885 0.190056 0.009633 0.052397 0.931277 0.006692 0.050422 0.70019 0.037348 0.21204 0.077668 0.771307 0.117607 0.033418 0.123324 0.024066 0.817776 0.034834 0.007815 0.814478 0.060876 0.116832 0.0 0.30457 0.578398 0.117031 MOTIF Limb_E13.5_H3K4me3_52_21_0.619_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.007483 0.444698 0.396505 0.151314 0.0 0.971718 0.018722 0.009559 0.087997 0.068704 0.013937 0.829362 0.002278 0.874289 0.123432 0.0 0.241181 0.028291 0.655303 0.075225 0.004139 0.051953 0.874143 0.069766 0.118831 0.643408 0.032022 0.205738 0.071434 0.814661 0.096031 0.017874 0.142297 0.044249 0.74444 0.069015 0.0382 0.884262 0.020281 0.057257 MOTIF Limb_E14.5_H3K4me3_53_26_0.619_2.957773e-319 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.004109 0.637686 0.23627 0.121935 0.000524 0.981452 0.018024 0.0 0.074054 0.066209 0.030679 0.829058 0.004361 0.938851 0.053846 0.002942 0.194383 0.038907 0.513348 0.253363 0.000441 0.049286 0.944276 0.005998 0.072775 0.727347 0.046621 0.153257 0.13496 0.729935 0.10368 0.031425 0.122472 0.011278 0.801438 0.064813 0.01635 0.902386 0.040104 0.041161 MOTIF Liver_E11.5_H3K4me3_29_33_0.659_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.984756 0.015244 0.0 0.058057 0.06909 0.072005 0.800849 0.0 0.972212 0.024183 0.003605 0.056688 0.085455 0.813056 0.044801 0.0 0.01666 0.981129 0.002211 0.108586 0.665064 0.06973 0.156619 0.167719 0.573714 0.06683 0.191738 0.09663 0.087364 0.776808 0.039198 0.092299 0.729698 0.125957 0.052046 MOTIF Midbrain_E13.5_H3K4me3_18_18_0.696_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.97822 0.018704 0.003077 0.13311 0.06644 0.053369 0.747081 0.003609 0.93962 0.044822 0.011949 0.113 0.031305 0.706236 0.149459 0.00611 0.061903 0.913092 0.018895 0.166128 0.673977 0.068717 0.091178 0.093212 0.72422 0.051896 0.130672 0.092403 0.053894 0.784134 0.069569 0.030405 0.875307 0.058539 0.03575 0.04948 0.186437 0.687581 0.076502 MOTIF Midbrain_E15.5_H3K4me3_40_19_0.652_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.003467 0.92874 0.025687 0.042106 0.13198 0.064356 0.058973 0.744691 0.004493 0.828739 0.161693 0.005075 0.086539 0.039105 0.725836 0.14852 0.007968 0.052927 0.925418 0.013687 0.087077 0.748607 0.046947 0.117368 0.104019 0.752226 0.107537 0.036218 0.132995 0.034448 0.78136 0.051197 0.024237 0.865621 0.055117 0.055026 MOTIF Stomach_P0_H3K4me3_57_47_0.616_8.549769e-316 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.003359 0.96759 0.029051 0.0 0.060093 0.045196 0.029385 0.865326 0.005137 0.766881 0.214483 0.013499 0.04181 0.014731 0.897699 0.04576 0.012758 0.023861 0.963381 0.0 0.166124 0.57974 0.101694 0.152442 0.020829 0.907207 0.048109 0.023854 0.240256 0.042655 0.65917 0.05792 0.062394 0.777822 0.126623 0.033161 MOTIF Liver_P0_H3K27me3_37_54_0.539_2.030106e-55 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.217619 0.643658 0.0 0.138722 0.0 0.066828 0.933172 0.0 0.485049 0.02412 0.490831 0.0 0.051576 0.757919 0.190505 0.0 0.0 0.871606 0.020133 0.10826 0.0 0.025991 0.974009 0.0 0.855506 0.070051 0.01166 0.062782 0.006401 0.052391 0.941208 0.0 0.0 0.890708 0.057474 0.051818 MOTIF Heart_E15.5_H3K4me3_48_25_0.614_2.450516e-319 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.095287 0.783038 0.035895 0.085781 0.061079 0.036044 0.902877 0.0 0.292104 0.014522 0.603862 0.089512 0.016116 0.383222 0.600662 0.0 0.061218 0.748145 0.067845 0.122792 0.0 0.031039 0.963841 0.005121 0.864801 0.032322 0.041134 0.061743 0.0 0.019224 0.980776 0.0 0.066546 0.80222 0.074146 0.057088 0.057727 0.618212 0.015802 0.308258 MOTIF Cranio-Facial_E15.5_H3K4me3_44_47_0.629_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.288801 0.511133 0.0 0.200065 0.022613 0.086064 0.891323 0.0 0.072389 0.072199 0.821234 0.034178 0.0 0.095371 0.904629 0.0 0.074268 0.804932 0.0 0.1208 0.0 0.011408 0.988592 0.0 0.716263 0.026572 0.026658 0.230506 0.0 0.090368 0.909632 0.0 0.174551 0.755833 0.0 0.069616 MOTIF Heart_E12.5_H3K4me3_41_39_0.613_5.028396e-313 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.061568 0.779071 0.062183 0.097178 0.049368 0.034397 0.883256 0.032979 0.053438 0.078791 0.808735 0.059036 0.058564 0.259923 0.676912 0.004601 0.265991 0.542728 0.027422 0.163859 0.025657 0.035649 0.934706 0.003988 0.86444 0.035608 0.050899 0.049052 0.013439 0.055407 0.926942 0.004211 0.072445 0.86954 0.008548 0.049467 MOTIF Intestine_E15.5_H3K4me3_67_47_0.585_1.239249e-153 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.097137 0.685466 0.021016 0.196381 0.015942 0.044556 0.905318 0.034185 0.04699 0.056147 0.817287 0.079575 0.0 0.098627 0.894996 0.006377 0.317764 0.43318 0.033605 0.215451 0.031478 0.065105 0.902926 0.000491 0.917874 0.0 0.053006 0.02912 0.017714 0.074291 0.893211 0.014785 0.061024 0.90916 0.0 0.029815 MOTIF Intestine_P0_H3K4me3_49_25_0.613_1.888483e-280 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.162059 0.751336 0.042019 0.044585 0.156513 0.063898 0.761977 0.017612 0.042771 0.065783 0.855476 0.035969 0.09242 0.126828 0.766843 0.013909 0.169023 0.696684 0.017828 0.116465 0.009373 0.151454 0.83705 0.002123 0.795411 0.036403 0.04301 0.125177 0.0 0.038323 0.92799 0.033686 0.027183 0.873214 0.063451 0.036151 0.454798 0.531428 0.013774 0.0 0.0 0.017308 0.982692 0.0 MOTIF Forebrain_E15.5_H3K4me3_42_34_0.635_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.099492 0.862065 0.013048 0.025396 0.315726 0.034211 0.631927 0.018136 0.066471 0.034149 0.81672 0.08266 0.0 0.174406 0.825594 0.0 0.014508 0.815162 0.023137 0.147193 0.0 0.033316 0.962128 0.004557 0.774154 0.017039 0.051144 0.157662 0.0 0.066337 0.928781 0.004883 0.088897 0.797088 0.031633 0.082383 MOTIF Midbrain_E15.5_H3K4me3_34_30_0.659_2.011292e-312 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.056114 0.796792 0.070217 0.076878 0.209854 0.023463 0.703164 0.063519 0.050246 0.041779 0.715651 0.192323 0.0 0.070991 0.929009 0.0 0.159654 0.660256 0.022404 0.157685 0.011502 0.015986 0.969581 0.00293 0.715323 0.03731 0.063992 0.183375 0.006805 0.05226 0.930486 0.010449 0.070318 0.860723 0.013901 0.055058 0.196969 0.261803 0.541228 0.0 MOTIF Liver_E12.5_H3K4me3_30_25_0.640_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.135794 0.746157 0.118049 0.0 0.049257 0.04447 0.906273 0.0 0.027244 0.063544 0.899466 0.009746 0.12777 0.368778 0.496313 0.007139 0.033995 0.822236 0.010904 0.132865 0.0 0.0 1.0 0.0 0.801268 0.024358 0.014893 0.159481 0.0 0.042084 0.937258 0.020657 0.052841 0.832541 0.103675 0.010943 MOTIF Midbrain_P0_H3K4me3_27_29_0.680_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.172589 0.701609 0.017377 0.108425 0.009388 0.027187 0.952981 0.010444 0.026049 0.045253 0.867894 0.060804 0.281617 0.03843 0.671136 0.008817 0.056296 0.880221 0.045237 0.018246 0.003776 0.032039 0.964185 0.0 0.565013 0.067387 0.016845 0.350755 0.0 0.06624 0.93376 0.0 0.042627 0.880479 0.014916 0.061978