MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Cranio-Facial_E15.5_H3K4me2_77_56_0.558_1.149848e-257 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.138493 0.701684 0.126595 0.033228 0.059749 0.082791 0.80552 0.051941 0.017565 0.037914 0.814575 0.129946 0.0 0.545825 0.040374 0.413801 0.0 0.043651 0.884131 0.072217 0.017634 0.0 0.025302 0.957063 0.005231 0.9672 0.023396 0.004173 0.014195 0.894799 0.038367 0.05264 0.193568 0.714301 0.039658 0.052473 MOTIF Limb_E12.5_H3K4me2_34_45_0.598_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.194055 0.651421 0.120536 0.033989 0.180312 0.113302 0.688372 0.018014 0.0 0.025246 0.96552 0.009234 0.0 0.91104 0.052405 0.036555 0.0 0.037011 0.881823 0.081167 0.213935 0.0 0.058061 0.728004 0.0 0.97393 0.0 0.02607 0.013075 0.939748 0.019599 0.027578 0.306189 0.551826 0.077954 0.064031 MOTIF Heart_E11.5_H3K4me2_65_29_0.556_1.730706e-274 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.011758 0.352442 0.302958 0.332843 0.16026 0.716863 0.122877 0.0 0.213646 0.017722 0.712738 0.055893 0.0 0.031068 0.968932 0.0 0.114078 0.797516 0.03017 0.058236 0.021683 0.0 0.929194 0.049123 0.048186 0.0 0.11558 0.836234 0.0 0.81311 0.005165 0.181725 0.009991 0.923296 0.0391 0.027613 0.031361 0.887495 0.028425 0.052719 0.200069 0.234909 0.0 0.565022 MOTIF Kidney_E14.5_H3K4me2_38_38_0.616_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.172893 0.793556 0.02231 0.01124 0.221458 0.114842 0.613087 0.050612 0.006297 0.047498 0.935534 0.01067 0.035999 0.877849 0.018002 0.06815 0.023221 0.040753 0.882447 0.053578 0.078547 0.0 0.01784 0.903613 0.0 0.586945 0.164072 0.248983 0.017601 0.953959 0.020929 0.007511 0.0 0.757846 0.040595 0.201559 MOTIF Midbrain_E11.5_H3K4me2_35_57_0.629_2.920101e-312 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.035651 0.910842 0.025088 0.028418 0.03798 0.06309 0.851874 0.047056 0.0 0.061045 0.901995 0.03696 0.0 0.893404 0.052569 0.054027 0.174166 0.0 0.676851 0.148983 0.060909 0.0 0.0 0.939091 0.0 0.672102 0.023837 0.304061 0.0 0.964117 0.035883 0.0 0.193166 0.51141 0.021802 0.273621 MOTIF Intestine_E14.5_H3K4me2_28_35_0.622_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.098935 0.895607 0.0 0.005458 0.01171 0.015553 0.961692 0.011046 0.218115 0.025449 0.661708 0.094728 0.0 0.041956 0.958044 0.0 0.883254 0.014485 0.068726 0.033535 0.057857 0.807852 0.052817 0.081473 0.03169 0.142329 0.769178 0.056803 0.020007 0.716725 0.111095 0.152174 0.033871 0.674316 0.036592 0.255221 MOTIF Lung_P0_H3K4me2_48_24_0.581_4.908009e-311 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.017563 0.863287 0.058302 0.060848 0.081274 0.781944 0.044151 0.092631 0.122873 0.03533 0.808887 0.03291 0.086638 0.030429 0.789748 0.093185 0.02292 0.008542 0.967151 0.001386 0.807851 0.039049 0.06389 0.08921 0.183328 0.712845 0.054397 0.049429 0.165969 0.067172 0.640506 0.126352 0.052599 0.869554 0.049531 0.028317 0.181747 0.322966 0.138429 0.356858 MOTIF Midbrain_P0_H3K4me2_43_32_0.583_9.337841e-322 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.944213 0.027502 0.028285 0.199073 0.012412 0.720003 0.068512 0.019055 0.032344 0.933849 0.014752 0.265954 0.438799 0.049901 0.245345 0.017106 0.015916 0.915519 0.051459 0.089158 0.053617 0.015014 0.842211 0.002772 0.875244 0.015654 0.10633 0.024121 0.915031 0.036944 0.023904 0.134194 0.659444 0.035336 0.171026 0.013679 0.36614 0.52869 0.091491 MOTIF Midbrain_E11.5_H3K4me3_40_46_0.657_3.335465e-310 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.170699 0.785507 0.015813 0.02798 0.069654 0.053354 0.847181 0.029811 0.048164 0.01374 0.84871 0.089386 0.07199 0.015824 0.908339 0.003847 0.893846 0.060331 0.012836 0.032987 0.067703 0.871424 0.044615 0.016258 0.070586 0.013566 0.680136 0.235712 0.120156 0.742011 0.013111 0.124722 0.23942 0.71201 0.015462 0.033108 0.084318 0.392358 0.314356 0.208968 MOTIF Hindbrain_E14.5_H3K4me3_46_31_0.635_5.101624e-309 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.086263 0.778376 0.109877 0.025485 0.078784 0.073727 0.690643 0.156846 0.004105 0.021376 0.963037 0.011482 0.000115 0.911691 0.046419 0.041775 0.04288 0.028988 0.866227 0.061905 0.091843 0.049866 0.007073 0.851217 0.005395 0.93624 0.048786 0.009578 0.138433 0.690495 0.024975 0.146097 0.289417 0.615603 0.025638 0.069341 0.0 0.649273 0.08031 0.270417 0.0 1.0 0.0 0.0 MOTIF Cranio-Facial_E15.5_H3K4me3_42_39_0.630_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.063631 0.902382 0.017841 0.016146 0.058946 0.077851 0.811059 0.052145 0.082378 0.050253 0.69183 0.175539 0.024624 0.663241 0.038997 0.273137 0.005646 0.047257 0.936129 0.010968 0.134624 0.014021 0.020896 0.830459 0.001186 0.955082 0.02602 0.017712 0.200447 0.693574 0.043437 0.062542 0.096154 0.828959 0.062328 0.012559 MOTIF Lung_P0_H3K4me3_36_20_0.645_2.529201e-317 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.110383 0.883993 0.0 0.005624 0.054595 0.021203 0.700435 0.223767 0.008013 0.03356 0.894427 0.064 0.026655 0.852541 0.057638 0.063166 0.061126 0.016241 0.758744 0.163888 0.068595 0.02483 0.066167 0.840409 0.006626 0.931468 0.021808 0.040098 0.029846 0.523554 0.262842 0.183758 0.006622 0.902321 0.065246 0.025811 0.045206 0.064641 0.244066 0.646087 MOTIF Midbrain_E13.5_H3K4me3_37_41_0.646_5.825691e-310 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.016776 0.688923 0.252709 0.041592 0.089681 0.047439 0.822337 0.040543 0.014716 0.016214 0.96121 0.007859 0.031037 0.916661 0.0 0.052301 0.02025 0.034362 0.62112 0.324268 0.041083 0.040459 0.0 0.918459 0.0 0.976339 0.010826 0.012835 0.00647 0.653521 0.058023 0.281986 0.206277 0.733106 0.0 0.060617 0.019591 0.288925 0.567192 0.124293 MOTIF Stomach_E16.5_H3K4me3_36_25_0.632_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.294547 0.19148 0.266863 0.24711 0.231006 0.755076 0.0 0.013918 0.294976 0.094653 0.566322 0.044049 0.005008 0.016502 0.970987 0.007503 0.131152 0.814875 0.0 0.053974 0.011209 0.025065 0.899401 0.064324 0.033995 0.075741 0.051638 0.838626 0.005742 0.908687 0.008904 0.076666 0.016808 0.922595 0.038138 0.022459 0.275605 0.572426 0.086039 0.065931 MOTIF Heart_E12.5_H3K4me3_39_34_0.625_2.931896e-315 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.223593 0.704512 0.0 0.071895 0.054728 0.045419 0.855962 0.043891 0.01222 0.00932 0.964963 0.013498 0.015071 0.917927 0.018776 0.048227 0.006549 0.031389 0.880101 0.081961 0.052853 0.034598 0.0 0.912549 0.009079 0.802045 0.034545 0.154331 0.0 0.92948 0.043327 0.027193 0.258833 0.353127 0.051453 0.336587 0.0874 0.347517 0.509625 0.055458 0.411811 0.477286 0.06238 0.048524 MOTIF Kidney_E14.5_H3K4me3_39_35_0.634_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.167172 0.735115 0.079089 0.018625 0.048078 0.018255 0.884634 0.049033 0.007184 0.049167 0.92837 0.015279 0.006001 0.682568 0.0 0.311432 0.051927 0.039897 0.825986 0.08219 0.094697 0.0 0.08344 0.821863 0.005171 0.98349 0.005333 0.006006 0.078328 0.896073 0.019892 0.005707 0.136279 0.486804 0.050382 0.326535 0.235095 0.352873 0.308759 0.103274 MOTIF Midbrain_E15.5_H3K4me3_21_27_0.683_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0123 0.935246 0.027461 0.024993 0.064434 0.046069 0.860332 0.029165 0.0 0.0 0.831605 0.168395 0.0 0.916272 0.010573 0.073154 0.0 0.0 0.906494 0.093506 0.28626 0.0 0.039135 0.674605 0.0 0.95452 0.029217 0.016263 0.052987 0.870127 0.06219 0.014696 0.230557 0.398045 0.036055 0.335343 MOTIF Forebrain_E16.5_H3K4me3_53_38_0.600_1.856106e-319 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.10511 0.802689 0.062784 0.029417 0.187117 0.025166 0.64292 0.144796 0.003459 0.040338 0.901539 0.054664 0.0239 0.73786 0.041986 0.196254 0.049345 0.031977 0.816549 0.102129 0.104948 0.020334 0.016777 0.857942 0.000949 0.894928 0.08127 0.022852 0.033105 0.748814 0.028164 0.189917 0.036241 0.812508 0.037255 0.113997 MOTIF Limb_E11.5_H3K4me3_49_37_0.632_1.330788e-287 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.013989 0.933381 0.025624 0.027006 0.199026 0.029955 0.615742 0.155277 0.0 0.035348 0.888529 0.076123 0.068319 0.718363 0.044935 0.168383 0.045682 0.00329 0.626789 0.324239 0.032404 0.00842 0.059994 0.899183 0.003785 0.932166 0.010336 0.053713 0.039557 0.901007 0.018243 0.041193 0.038259 0.793261 0.092901 0.075578 0.137959 0.142593 0.476587 0.242861 MOTIF Stomach_E15.5_H3K4me3_32_21_0.659_2.610459e-312 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.089901 0.825872 0.051428 0.032799 0.174679 0.100676 0.676858 0.047787 0.005624 0.036259 0.893924 0.064193 0.101647 0.801197 0.056179 0.040977 0.055904 0.029165 0.718458 0.196472 0.071675 0.00583 0.070316 0.852179 0.0 0.962071 0.015148 0.022781 0.008519 0.853229 0.015631 0.122622 0.066846 0.586442 0.045166 0.301546 0.056675 0.117763 0.697776 0.127786 MOTIF Forebrain_E14.5_H3K4me3_49_43_0.648_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.148521 0.810285 0.012991 0.028203 0.014287 0.051154 0.748224 0.186335 0.005086 0.028298 0.942739 0.023877 0.004937 0.902151 0.015277 0.077635 0.014746 0.0 0.733522 0.251732 0.062692 0.041261 0.0 0.896047 0.0 0.71989 0.147615 0.132495 0.022659 0.897667 0.030603 0.049071 0.223866 0.59697 0.030941 0.148223 MOTIF Stomach_P0_H3K4me3_48_55_0.629_7.826168e-315 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.228276 0.731034 0.013654 0.027035 0.024022 0.015057 0.898974 0.061948 0.017239 0.067245 0.757616 0.1579 0.033369 0.892948 0.005871 0.067812 0.049211 0.0 0.681125 0.269664 0.036189 0.014668 0.022902 0.92624 0.0 0.775776 0.0 0.224224 0.009873 0.942016 0.040098 0.008013 0.02786 0.799881 0.058729 0.113529 MOTIF Cranio-Facial_E13.5_H3K9ac_11_25_0.608_6.266652e-315 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.259344 0.503037 0.194136 0.043483 0.020574 0.754088 0.198395 0.026943 0.016429 0.054782 0.928789 0.0 0.004355 0.009563 0.978123 0.00796 0.016981 0.938374 0.0 0.044646 0.0 0.03745 0.96255 0.0 0.024498 0.11007 0.087737 0.777695 0.0 0.341365 0.252181 0.406454 0.017832 0.910136 0.009896 0.062136 0.0 0.868924 0.100218 0.030858 MOTIF Liver_P0_H3K9ac_24_34_0.590_5.284461e-314 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.189455 0.063082 0.578174 0.16929 0.139195 0.812848 0.016865 0.031092 0.051853 0.0362 0.88602 0.025927 0.018077 0.056439 0.748748 0.176737 0.017561 0.695557 0.037608 0.249274 0.01494 0.091655 0.871683 0.021722 0.067872 0.042523 0.026006 0.863598 0.004256 0.953602 0.029215 0.012927 0.005623 0.943056 0.007795 0.043526 MOTIF Limb_E12.5_H3K9ac_27_25_0.597_3.005908e-304 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.093146 0.796695 0.086493 0.023667 0.259552 0.064207 0.637425 0.038816 0.013173 0.018363 0.947385 0.021079 0.024121 0.828199 0.122563 0.025117 0.030256 0.048805 0.825783 0.095155 0.041755 0.031435 0.020256 0.906554 0.0 0.958395 0.033072 0.008532 0.027976 0.69084 0.021446 0.259738 0.121821 0.593187 0.041709 0.243283 0.0 0.258883 0.655282 0.085835 MOTIF Forebrain_E13.5_H3K9ac_28_38_0.597_7.247905e-308 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.114456 0.050227 0.797138 0.038179 0.016068 0.958372 0.003936 0.021624 0.094573 0.031567 0.792066 0.081794 0.023536 0.035339 0.832493 0.108632 0.092324 0.835797 0.020145 0.051734 0.0133 0.028559 0.547283 0.410858 0.056765 0.033819 0.017765 0.891651 0.003518 0.750658 0.04063 0.205194 0.008792 0.912494 0.006027 0.072687 0.028011 0.699506 0.099103 0.173381 MOTIF Heart_P0_H3K9ac_33_19_0.591_8.169387e-250 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.028058 0.895464 0.069543 0.006935 0.085492 0.016467 0.776637 0.121404 0.01015 0.07892 0.841366 0.069565 0.100674 0.664427 0.033805 0.201094 0.013478 0.019719 0.71196 0.254843 0.073362 0.0 0.053588 0.87305 0.001707 0.924404 0.005036 0.068853 0.025481 0.864148 0.060118 0.050253 0.014061 0.76035 0.058255 0.167334 0.043139 0.277019 0.312826 0.367016 MOTIF Lung_E14.5_H3K9ac_38_25_0.596_1.444939e-318 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.060201 0.887951 0.018456 0.033392 0.188964 0.063939 0.697955 0.049142 0.00692 0.042778 0.848701 0.1016 0.108991 0.659797 0.033303 0.197908 0.033461 0.040586 0.719655 0.206298 0.091995 0.011482 0.046751 0.849772 0.001225 0.974493 0.007461 0.01682 0.023321 0.89467 0.025125 0.056884 0.019227 0.70843 0.035091 0.237253 0.276229 0.274031 0.35951 0.090229 MOTIF Hindbrain_E14.5_H3K9ac_48_51_0.570_3.191342e-258 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.841501 0.148572 0.009928 0.084573 0.061198 0.813869 0.040361 0.0 0.094898 0.905102 0.0 0.0 0.514199 0.0 0.485801 0.006207 0.030283 0.862969 0.100541 0.132631 0.0 0.03852 0.828849 0.0 0.81106 0.008207 0.180733 0.035329 0.878028 0.008681 0.077962 0.086541 0.839975 0.007054 0.066431 MOTIF Neural-Tube_E12.5_H3K9ac_55_44_0.576_2.398092e-138 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.201999 0.750063 0.036296 0.011643 0.083726 0.076051 0.776944 0.063279 0.0 0.010104 0.972524 0.017371 0.003323 0.673159 0.0 0.323518 0.050625 0.020542 0.858181 0.070652 0.055223 0.026519 0.029433 0.888825 0.004821 0.868619 0.031107 0.095454 0.009699 0.936087 0.017797 0.036417 0.287008 0.59788 0.056588 0.058524 0.168418 0.541249 0.159099 0.131234