MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Forebrain_P0_H3K9me3_100_152_0.503_1.524366e-05 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.962 0.001 0.036 0.001 0.884 0.001 0.114 0.997 0.001 0.001 0.001 0.001 0.944 0.001 0.054 0.977 0.001 0.021 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 MOTIF Heart_P0_H3K9me3_118_159_0.501_0.0002140198 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.004 0.001 0.001 0.994 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 MOTIF Cranio-Facial_E13.5_H3K9me3_87_166_0.511_2.107884e-21 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.637 0.001 0.361 0.001 0.462 0.447 0.09 0.001 0.001 0.001 0.001 0.997 0.103 0.137 0.759 0.001 0.001 0.014 0.001 0.984 0.059 0.001 0.939 0.001 0.362 0.001 0.636 0.001 0.066 0.239 0.363 0.332 0.997 0.001 0.001 0.001 0.984 0.014 0.001 0.001 0.731 0.001 0.267 0.001 0.001 0.001 0.891 0.107 MOTIF Midbrain_P0_H3K9me3_83_163_0.511_6.41928e-08 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.049 0.001 0.949 0.053 0.001 0.945 0.001 0.001 0.001 0.997 0.001 0.077 0.001 0.716 0.206 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.919 0.001 0.079 0.001 0.001 0.001 0.93 0.068 MOTIF Liver_E11.5_H3K9me3_86_61_0.501_0.109817 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.141548 0.203546 0.648189 0.006716 0.105872 0.047843 0.024876 0.82141 0.049219 0.033887 0.85907 0.057824 0.028189 0.034242 0.125375 0.812194 0.121088 0.011631 0.863224 0.004058 0.086075 0.000809 0.892778 0.020337 0.136881 0.086193 0.667133 0.109794 0.919312 0.013165 0.037789 0.029734 0.683577 0.218175 0.072211 0.026036 MOTIF Hindbrain_E13.5_H3K9me3_119_79_0.504_1.766222e-19 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.009828 0.026445 0.026011 0.937715 0.198332 0.004937 0.772606 0.024125 0.068852 0.006485 0.020819 0.903844 0.010261 0.006022 0.983718 0.0 0.061997 0.001641 0.931817 0.004545 0.032244 0.0115 0.705827 0.250429 0.855419 0.003245 0.075766 0.065569 0.585484 0.243627 0.057526 0.113363 0.946083 0.003633 0.015155 0.035129 MOTIF Forebrain_E15.5_H3K9me3_76_4_0.516_4.816539e-10 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.426876 0.192967 0.174923 0.205235 0.058793 0.014506 0.042066 0.884634 0.058493 0.019723 0.899793 0.021991 0.033861 0.014303 0.030009 0.921826 0.031658 0.001213 0.938337 0.028792 0.118951 0.007068 0.869572 0.004409 0.20054 0.055598 0.301454 0.442408 0.93271 0.006779 0.04389 0.016622 0.756916 0.036644 0.017626 0.188815 0.869518 0.017188 0.099586 0.013708 0.183838 0.107827 0.626348 0.081987 MOTIF Heart_E11.5_H3K9me3_87_9_0.507_4.363184e-05 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.015496 0.032048 0.009198 0.943258 0.016135 0.021047 0.958716 0.004103 0.007011 0.017693 0.012182 0.963114 0.014667 0.0 0.985333 0.0 0.073846 0.0 0.9176 0.008554 0.218595 0.260556 0.311374 0.209474 0.953172 0.018534 0.022534 0.00576 0.766006 0.030016 0.060864 0.143114 0.846024 0.026044 0.120961 0.006971 0.041725 0.189509 0.647126 0.12164 MOTIF Midbrain_E14.5_H3K9me3_98_3_0.506_1.543423e-06 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.046288 0.016877 0.017913 0.918923 0.097604 0.060252 0.813434 0.02871 0.060244 0.021625 0.036248 0.881883 0.092748 0.000494 0.902822 0.003936 0.036333 0.000925 0.932005 0.030736 0.132665 0.068404 0.67434 0.124592 0.916472 0.019917 0.034214 0.029397 0.687144 0.07509 0.159151 0.078615 0.68897 0.074687 0.214114 0.022228 0.045468 0.158606 0.72316 0.072767 0.471594 0.222929 0.060084 0.245393 MOTIF Hindbrain_E15.5_H3K9me3_102_11_0.511_6.147315e-13 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.115292 0.02023 0.040778 0.8237 0.130325 0.031208 0.828284 0.010183 0.025479 0.024291 0.034211 0.916019 0.028447 0.003435 0.953516 0.014602 0.022134 0.008632 0.939525 0.029708 0.207236 0.042833 0.602559 0.147372 0.904063 0.003482 0.040006 0.05245 0.742992 0.105456 0.04845 0.103103 0.73616 0.054344 0.162944 0.046553 0.10309 0.098066 0.711164 0.087679 0.267667 0.639127 0.029384 0.063823 MOTIF Forebrain_E13.5_H3K9me3_122_112_0.500_1.744651e-05 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.048542 0.029766 0.025087 0.896605 0.143382 0.02027 0.797853 0.038494 0.04626 0.009922 0.143482 0.800336 0.028526 0.000857 0.965855 0.004762 0.022506 0.0 0.969309 0.008185 0.133622 0.023682 0.711758 0.130938 0.891792 0.008826 0.068238 0.031143 0.668747 0.187759 0.038153 0.105341 0.754951 0.009779 0.201333 0.033938 MOTIF Midbrain_E15.5_H3K9me3_76_26_0.517_9.091009e-07 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.099147 0.020699 0.054395 0.82576 0.142215 0.049684 0.79139 0.016712 0.049743 0.029447 0.034039 0.886771 0.032908 0.00068 0.948553 0.017859 0.018375 0.000992 0.94813 0.032504 0.171469 0.01522 0.69501 0.1183 0.873546 0.007862 0.070884 0.047708 0.700139 0.151902 0.058427 0.089531 0.757808 0.035739 0.129029 0.077423 MOTIF Midbrain_P0_H3K9me3_86_25_0.511_6.926965e-10 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.105702 0.017366 0.060304 0.816627 0.146499 0.054461 0.779715 0.019325 0.0236 0.034828 0.102933 0.838638 0.023757 0.005572 0.956916 0.013755 0.020285 0.001508 0.960337 0.01787 0.095319 0.024985 0.75166 0.128036 0.889749 0.017938 0.029857 0.062455 0.680898 0.097407 0.100121 0.121574 0.637371 0.071477 0.246609 0.044543 MOTIF Neural-Tube_E13.5_H3K9me3_133_52_0.503_7.242403e-09 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.005674 0.011604 0.023454 0.959268 0.071262 0.036608 0.869064 0.023066 0.050952 0.007277 0.014221 0.92755 0.002558 0.0 0.997442 0.0 0.0515 0.0 0.943179 0.005322 0.161259 0.036211 0.577155 0.225375 0.851162 0.004546 0.12704 0.017252 0.593396 0.223414 0.060706 0.122484 0.80801 0.077157 0.084676 0.030157 MOTIF Neural-Tube_E15.5_H3K9me3_79_21_0.514_2.16382e-05 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.00475 0.014137 0.045843 0.93527 0.147864 0.067005 0.781953 0.003178 0.040602 0.036376 0.038862 0.884159 0.023755 0.002885 0.965915 0.007444 0.022531 0.000512 0.973037 0.003921 0.157587 0.041159 0.679168 0.122085 0.797705 0.012256 0.107384 0.082655 0.647339 0.178471 0.065789 0.108402 0.744389 0.045426 0.169977 0.040207 MOTIF Liver_E16.5_H3K9me3_60_31_0.510_0.001395111 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.003599 0.038844 0.029269 0.928288 0.021447 0.011885 0.927243 0.039425 0.024003 0.035803 0.014353 0.925841 0.022421 0.011294 0.955948 0.010338 0.103174 0.0 0.893745 0.00308 0.258774 0.180574 0.466447 0.094205 0.974233 0.013121 0.009759 0.002887 0.915571 0.017368 0.059684 0.007377 0.643576 0.018272 0.334663 0.003489 0.284569 0.158387 0.367586 0.189458 MOTIF Cranio-Facial_E14.5_H3K9me3_103_16_0.506_1.926702e-19 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.022917 0.014674 0.010804 0.951606 0.055835 0.040232 0.850404 0.05353 0.075225 0.017588 0.02316 0.884027 0.102066 0.001277 0.862851 0.033807 0.055938 0.00022 0.929276 0.014566 0.103761 0.14444 0.616762 0.135036 0.9321 0.01709 0.024224 0.026586 0.772398 0.036575 0.117733 0.073294 0.777301 0.009971 0.191981 0.020746 0.282048 0.135797 0.536833 0.045322 0.373291 0.422897 0.185192 0.018621 0.332931 0.37885 0.124294 0.163925 MOTIF Forebrain_E14.5_H3K9me3_91_4_0.507_2.265306e-08 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.051721 0.014777 0.00989 0.923612 0.057118 0.019777 0.9013 0.021805 0.068377 0.012054 0.018666 0.900903 0.192839 0.001931 0.794918 0.010312 0.034535 0.000311 0.946749 0.018406 0.089636 0.124764 0.606554 0.179047 0.938885 0.019067 0.020627 0.021422 0.687957 0.126672 0.063221 0.12215 0.827513 0.017759 0.139915 0.014813 0.309103 0.105925 0.510891 0.07408 0.437295 0.348101 0.175785 0.03882 MOTIF Hindbrain_E11.5_H3K9me3_48_10_0.519_2.061225e-08 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.015886 0.018425 0.029992 0.935697 0.048148 0.042384 0.884047 0.02542 0.05528 0.050489 0.03394 0.860292 0.05997 0.001001 0.916401 0.022627 0.040352 0.008031 0.930514 0.021103 0.138109 0.145874 0.570069 0.145948 0.86462 0.030224 0.034854 0.070302 0.805364 0.110339 0.04439 0.039907 0.728311 0.03232 0.140543 0.098825 0.254682 0.181532 0.471899 0.091887 0.102258 0.40101 0.468014 0.028719 MOTIF Hindbrain_E14.5_H3K9me3_122_26_0.506_4.125349e-08 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.032248 0.019742 0.016229 0.931782 0.115131 0.040911 0.833507 0.010451 0.076022 0.009122 0.019387 0.895469 0.1662 0.000129 0.817897 0.015774 0.030311 0.00092 0.949517 0.019252 0.152762 0.090021 0.633204 0.124013 0.906814 0.018295 0.027434 0.047457 0.640297 0.082094 0.165424 0.112185 0.85752 0.049767 0.062592 0.030121 0.295191 0.100964 0.525637 0.078208 MOTIF Lung_E14.5_H3K9me3_93_8_0.502_4.729462e-13 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.057723 0.020937 0.02559 0.895749 0.061346 0.03047 0.884255 0.02393 0.012221 0.020747 0.019871 0.947161 0.099873 0.002249 0.88245 0.015429 0.045168 0.003264 0.923938 0.027631 0.074178 0.131478 0.62883 0.165514 0.794735 0.034922 0.09221 0.078132 0.759901 0.033264 0.164597 0.042237 0.809577 0.014456 0.160729 0.015238 0.239535 0.125644 0.581809 0.053011 MOTIF Forebrain_P0_H3K9me3_97_9_0.506_4.495557e-05 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.034367 0.02652 0.062041 0.877073 0.06753 0.088027 0.826726 0.017716 0.035903 0.041051 0.044611 0.878435 0.118244 0.002315 0.866477 0.012964 0.049636 0.002587 0.927929 0.019849 0.101366 0.117198 0.700622 0.080813 0.869912 0.054051 0.042131 0.033906 0.70588 0.073731 0.15632 0.06407 0.736908 0.0473 0.167994 0.047799 0.203576 0.139265 0.577872 0.079286 MOTIF Hindbrain_P0_H3K9me3_72_5_0.514_3.357163e-05 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.039817 0.009317 0.04911 0.901756 0.047079 0.047908 0.886405 0.018608 0.041177 0.031421 0.046756 0.880645 0.129763 0.001811 0.851577 0.016849 0.043344 0.004461 0.934391 0.017805 0.117288 0.100275 0.650024 0.132413 0.860349 0.027806 0.072555 0.039289 0.703426 0.049925 0.158987 0.087663 0.751882 0.060571 0.15743 0.030117 0.346784 0.11905 0.457137 0.077029 MOTIF Neural-Tube_E14.5_H3K9me3_72_9_0.509_8.165222e-05 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.038781 0.0313 0.025564 0.904356 0.032294 0.035451 0.909181 0.023074 0.035382 0.038107 0.022349 0.904163 0.112179 0.003849 0.877666 0.006306 0.045629 0.004742 0.93083 0.0188 0.135523 0.131478 0.594828 0.13817 0.878246 0.023677 0.019566 0.07851 0.756368 0.035837 0.167106 0.040688 0.726024 0.047317 0.177051 0.049609 0.281806 0.172014 0.439012 0.107169 MOTIF Lung_P0_H3K9me3_49_15_0.517_3.254635e-09 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.017155 0.040227 0.02378 0.918838 0.064347 0.03158 0.887508 0.016564 0.024186 0.061582 0.033721 0.88051 0.130419 0.005925 0.854416 0.00924 0.042602 0.005179 0.942761 0.009458 0.13586 0.16215 0.565947 0.136043 0.868812 0.019154 0.065684 0.046351 0.822697 0.0391 0.098526 0.039676 0.765426 0.023433 0.182545 0.028597 MOTIF Cranio-Facial_E15.5_H3K9me3_73_16_0.509_6.476519e-08 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.009339 0.054177 0.013661 0.922823 0.056741 0.049408 0.876456 0.017395 0.016557 0.027046 0.034015 0.922381 0.04555 0.026959 0.923078 0.004412 0.060265 0.001586 0.922105 0.016044 0.105987 0.199458 0.524592 0.169963 0.925872 0.01375 0.034071 0.026307 0.762964 0.127365 0.036633 0.073038 0.738584 0.057263 0.18636 0.017792 MOTIF Midbrain_E11.5_H3K9me3_43_23_0.516_9.964647e-05 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.010875 0.038352 0.01522 0.935553 0.091086 0.024387 0.87769 0.006837 0.045602 0.017603 0.072403 0.864391 0.139857 0.004089 0.853361 0.002693 0.059442 0.002507 0.924613 0.013439 0.166567 0.133011 0.53126 0.169161 0.917186 0.026476 0.039713 0.016625 0.756706 0.157407 0.049242 0.036645 0.745599 0.020836 0.199701 0.033865 MOTIF Heart_E14.5_H3K9me3_100_86_0.507_6.842758e-09 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.038488 0.029192 0.021467 0.910852 0.103831 0.037573 0.760949 0.097647 0.09473 0.009236 0.004949 0.891085 0.021916 0.001239 0.976846 0.0 0.079911 0.0 0.911689 0.0084 0.031445 0.118754 0.663719 0.186082 0.846403 0.023337 0.048762 0.081498 0.777376 0.027525 0.039493 0.155606 0.730787 0.037039 0.192018 0.040156 MOTIF Limb_E14.5_H3K9me3_69_17_0.514_1.246755e-12 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.100826 0.051672 0.003812 0.84369 0.10341 0.024014 0.84474 0.027836 0.065411 0.009389 0.025925 0.899275 0.038749 0.013019 0.947877 0.000355 0.112133 0.002105 0.866468 0.019294 0.111455 0.175281 0.536417 0.176847 0.932891 0.013574 0.033819 0.019716 0.82433 0.022223 0.064959 0.088487 0.874384 0.021611 0.095681 0.008325 MOTIF Stomach_E14.5_H3K9me3_74_13_0.505_2.367757e-07 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.057308 0.052493 0.012148 0.878051 0.058148 0.030451 0.87204 0.039361 0.027342 0.026702 0.027097 0.918859 0.012709 0.00409 0.981621 0.001579 0.040533 0.003485 0.93035 0.025631 0.123184 0.14954 0.540189 0.187087 0.887945 0.040654 0.058067 0.013334 0.918732 0.018628 0.019704 0.042936 0.721042 0.014458 0.255101 0.0094