MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Liver_E16.5_H3K27me3_32_60_0.553_2.444589e-37 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.201092 0.737138 0.02918 0.032589 0.019946 0.950802 0.027156 0.002096 0.103898 0.08889 0.046828 0.760384 0.004438 0.973511 0.019653 0.002398 0.038611 0.042611 0.855733 0.063044 0.0 0.944419 0.055581 0.0 0.193507 0.107088 0.016593 0.682812 0.0 0.02853 0.909502 0.061968 0.196783 0.519536 0.01774 0.265942 0.373847 0.398616 0.210701 0.016836 MOTIF Heart_E13.5_H3K4me3_82_89_0.555_1.253894e-130 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.015852 0.901865 0.039676 0.042607 0.203383 0.748518 0.038048 0.010051 0.081935 0.046144 0.092254 0.779667 0.008448 0.908319 0.058675 0.024558 0.129079 0.032826 0.809978 0.028117 0.0 0.957435 0.042565 0.0 0.0 0.021925 0.029134 0.948941 0.0 0.059154 0.772563 0.168283 0.018314 0.601167 0.0 0.380519 MOTIF Hindbrain_E16.5_H3K4me3_42_55_0.616_3.36635e-312 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.375994 0.229516 0.140971 0.253519 0.037049 0.919324 0.030862 0.012765 0.149104 0.497049 0.259978 0.093869 0.209238 0.015649 0.085038 0.690075 0.008949 0.980245 0.006002 0.004805 0.030561 0.0 0.920742 0.048698 0.007088 0.935411 0.052744 0.004758 0.046747 0.024494 0.076702 0.852057 0.0 0.030257 0.892266 0.077477 MOTIF Limb_E13.5_H3K4me3_70_47_0.593_1.81582e-175 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.168724 0.184108 0.110618 0.536551 0.007883 0.951 0.023025 0.018092 0.167821 0.793265 0.035298 0.003616 0.062207 0.028941 0.074585 0.834267 0.003985 0.992085 0.003929 0.0 0.21311 0.028385 0.701721 0.056784 0.0 0.710029 0.289971 0.0 0.088977 0.099904 0.043774 0.767344 0.0 0.04031 0.91731 0.04238 0.017638 0.927882 0.019962 0.034518 0.10421 0.03313 0.527471 0.33519 MOTIF Limb_E14.5_H3K9ac_70_74_0.552_6.454826e-55 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.036069 0.930399 0.0 0.033532 0.019105 0.980895 0.0 0.0 0.109454 0.035142 0.011823 0.843581 0.0 0.901052 0.085446 0.013502 0.037192 0.0 0.917347 0.045461 0.003809 0.944082 0.052109 0.0 0.239703 0.031892 0.113107 0.615298 0.0 0.010563 0.739666 0.24977 0.237954 0.75634 0.0 0.005706 0.29687 0.219695 0.093688 0.389747 MOTIF Forebrain_P0_H3K9ac_59_88_0.555_7.013066e-102 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.345768 0.139628 0.0 0.514604 0.02993 0.0 0.856906 0.113164 0.00304 0.991783 0.0 0.005177 0.927146 0.0 0.049925 0.022929 0.0 0.052944 0.947056 0.0 0.161274 0.766713 0.054449 0.017565 0.139656 0.01993 0.814053 0.026361 0.807684 0.12346 0.0 0.068856 0.0 0.016358 0.970387 0.013256 MOTIF Midbrain_P0_H3K9ac_64_98_0.551_4.825455e-81 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.727044 0.117966 0.021452 0.133538 0.04748 0.075544 0.692747 0.184229 0.013369 0.959345 0.019266 0.008019 0.908982 0.0 0.091018 0.0 0.0 0.457765 0.537157 0.005078 0.085034 0.858876 0.018501 0.037589 0.0 0.066958 0.933042 0.0 0.8596 0.030556 0.0 0.109845 0.054058 0.046705 0.781008 0.118229 MOTIF Hindbrain_E14.5_H3K9ac_51_85_0.567_7.104555e-188 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.080876 0.855815 0.02369 0.039619 0.035209 0.065266 0.028418 0.871106 0.031134 0.912673 0.032253 0.02394 0.058392 0.018269 0.923339 0.0 0.0 0.916376 0.083624 0.0 0.016055 0.030445 0.038195 0.915305 0.0 0.068191 0.794455 0.137354 0.01205 0.350782 0.0 0.637168 0.115131 0.846709 0.03816 0.0 MOTIF Limb_E12.5_H3K9ac_51_39_0.563_1.585601e-96 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.398338 0.136924 0.416964 0.047774 0.021338 0.829478 0.13164 0.017544 0.091571 0.865937 0.037621 0.004871 0.108411 0.054012 0.04025 0.797328 0.007672 0.922924 0.059218 0.010185 0.210125 0.033908 0.709784 0.046183 0.0 0.841349 0.155687 0.002964 0.118634 0.065106 0.073492 0.742768 0.003864 0.00756 0.877709 0.110867 0.018555 0.719514 0.043332 0.218599 0.185548 0.134042 0.645814 0.034596 MOTIF Cranio-Facial_E11.5_H3K9ac_50_89_0.573_3.016318e-112 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.221526 0.693345 0.085129 0.0 0.026998 0.793115 0.021007 0.158879 0.19615 0.0 0.0 0.80385 0.0 0.98109 0.007821 0.011089 0.045805 0.000898 0.916514 0.036784 0.009341 0.954355 0.027185 0.009119 0.034113 0.057684 0.081145 0.827059 0.0 0.0 1.0 0.0 0.050795 0.616687 0.046035 0.286483 MOTIF Midbrain_E15.5_H3K9ac_45_81_0.594_5.395068e-224 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.24447 0.0 0.75553 0.0 0.036112 0.963888 0.0 0.0 0.891106 0.026273 0.04469 0.037931 0.0 0.077657 0.919145 0.003198 0.028736 0.922461 0.018078 0.030724 0.014793 0.027288 0.957919 0.0 0.73129 0.0 0.104133 0.164577 0.0 0.072966 0.896032 0.031003 MOTIF Neural-Tube_E12.5_H3K9ac_71_94_0.539_4.419557e-67 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.160016 0.389952 0.199593 0.250438 0.421127 0.0 0.578873 0.0 0.01397 0.929907 0.053736 0.002388 0.949955 0.037396 0.0 0.012648 0.0 0.027219 0.972781 0.0 0.080482 0.892334 0.0 0.027184 0.080554 0.104976 0.802836 0.011634 0.935092 0.0 0.0 0.064908 0.023913 0.041988 0.67948 0.254619 MOTIF Cranio-Facial_E14.5_H3K4me2_76_96_0.540_1.599044e-97 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.093483 0.296004 0.610512 0.0 0.408678 0.540308 0.051014 0.0 0.0 0.934274 0.065726 0.0 0.041979 0.050039 0.043915 0.864067 0.0 0.891941 0.097761 0.010298 0.047009 0.024758 0.891815 0.036419 0.0 0.915442 0.084558 0.0 0.021698 0.021702 0.028828 0.927772 0.0 0.0 0.780762 0.219238 MOTIF Midbrain_E11.5_H3K4me2_80_93_0.553_1.747138e-117 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.400247 0.520465 0.018894 0.060394 0.019192 0.889192 0.077771 0.013846 0.031764 0.047012 0.034036 0.887188 0.012187 0.902664 0.0806 0.004549 0.01213 0.025261 0.924305 0.038304 0.0 0.8707 0.1293 0.0 0.016258 0.018942 0.029603 0.935196 0.0 0.043139 0.956861 0.0 0.0 0.489834 0.038498 0.471668 MOTIF Midbrain_E14.5_H3K4me2_21_57_0.633_4.794816e-313 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.0 0.878628 0.121372 0.0 0.735047 0.044049 0.220904 0.0 0.0 0.032648 0.95627 0.011082 0.009552 0.990448 0.0 0.0 0.0 0.0 1.0 0.0 0.907114 0.04469 0.0 0.048197 0.020271 0.0 0.776538 0.203191 0.0 0.433206 0.123231 0.443563 MOTIF Midbrain_E15.5_H3K4me2_92_110_0.522_1.105892e-69 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.723915 0.028588 0.0 0.247497 0.028747 0.0 0.971253 0.0 0.008425 0.982791 0.008784 0.0 0.699229 0.0 0.044423 0.256348 0.0 0.03112 0.96888 0.0 0.0 0.690299 0.0 0.309701 0.043821 0.061467 0.886585 0.008127 0.850054 0.0 0.0 0.149946 0.0 0.281391 0.698844 0.019765 MOTIF Forebrain_E12.5_H3K4me2_78_39_0.560_6.149268e-120 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.008095 0.837095 0.0 0.15481 0.459957 0.440749 0.038361 0.060933 0.121822 0.823391 0.054786 0.0 0.112318 0.042542 0.125933 0.719207 0.000165 0.951347 0.034684 0.013803 0.19436 0.003716 0.764444 0.03748 0.0 0.977934 0.022066 0.0 0.042164 0.0 0.066716 0.89112 0.0 0.029893 0.861355 0.108752 0.0 0.965249 0.0 0.034751 MOTIF Neural-Tube_E12.5_H3K4me2_72_97_0.546_4.574055e-79 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.32225 0.620922 0.039584 0.017244 0.0 0.9161 0.0839 0.0 0.046643 0.088508 0.060064 0.804785 0.0 0.93582 0.059809 0.004371 0.263639 0.111325 0.625036 0.0 0.0 0.955783 0.044217 0.0 0.018284 0.052223 0.072266 0.857227 0.0 0.034128 0.749299 0.216573 0.0 0.984646 0.0 0.015354 MOTIF Intestine_E16.5_H3K4me3_45_39_0.615_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.021817 0.010524 0.967659 0.0 0.032774 0.953049 0.014176 0.0 0.423129 0.034195 0.527586 0.01509 0.054795 0.022064 0.923141 0.0 0.108228 0.801947 0.053299 0.036525 0.004557 0.099804 0.895638 0.0 0.867293 0.027917 0.020952 0.083838 0.0 0.072127 0.758835 0.169038 0.239606 0.581758 0.041237 0.137399 MOTIF Heart_E15.5_H3K4me3_56_24_0.600_2.544801e-314 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.017056 0.023908 0.952394 0.006642 0.172337 0.745272 0.007599 0.074792 0.086459 0.013395 0.853149 0.046997 0.064662 0.025818 0.9046 0.004919 0.094246 0.812519 0.036418 0.056817 0.002927 0.268923 0.728151 0.0 0.777557 0.047565 0.0 0.174878 0.052793 0.108223 0.74435 0.094634 0.076646 0.729983 0.073287 0.120084 0.376954 0.208173 0.028916 0.385957 MOTIF Stomach_E16.5_H3K4me3_34_23_0.644_8.93156e-312 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.11056 0.122277 0.61961 0.147552 0.086405 0.857513 0.026854 0.029228 0.133176 0.040286 0.784339 0.042199 0.006904 0.080126 0.909123 0.003848 0.278496 0.660032 0.026157 0.035315 0.007049 0.122111 0.87084 0.0 0.753367 0.046229 0.045192 0.155213 0.00527 0.018011 0.947465 0.029254 0.054368 0.893906 0.033297 0.018429 0.169063 0.163022 0.184525 0.48339 MOTIF Neural-Tube_E14.5_H3K4me3_72_78_0.588_1.311783e-179 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.258941 0.14523 0.441803 0.154026 0.00379 0.940574 0.055636 0.0 0.844909 0.0 0.067756 0.087335 0.0 0.041474 0.95563 0.002895 0.174837 0.793332 0.0 0.031832 0.018568 0.059514 0.918321 0.003597 0.760944 0.093633 0.038397 0.107026 0.009266 0.090508 0.750701 0.149526 0.001008 0.915176 0.075176 0.00864 MOTIF Liver_P0_H3K27me3_56_78_0.516_1.535988e-22 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.0 1.0 0.0 0.0 0.03196 0.039922 0.0 0.928117 0.011565 0.844764 0.0 0.143671 0.246838 0.036755 0.671591 0.044816 0.008682 0.962684 0.028634 0.0 0.049817 0.114646 0.020378 0.815159 0.0 0.09044 0.898091 0.011469 0.342484 0.506843 0.051367 0.099306 MOTIF Heart_P0_H3K9ac_50_100_0.560_1.570723e-79 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.193447 0.018302 0.559307 0.228944 0.018254 0.956928 0.024818 0.0 0.837267 0.02962 0.053985 0.079127 0.0 0.065854 0.934146 0.0 0.069308 0.905121 0.0 0.02557 0.032431 0.073482 0.894087 0.0 0.901785 0.0 0.043785 0.054431 0.0 0.060592 0.907112 0.032296 0.172298 0.502091 0.0 0.325611 MOTIF Neural-Tube_E15.5_H3K9ac_40_71_0.615_4.530399e-309 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.096788 0.88611 0.017101 0.0 0.91465 0.0 0.052591 0.032759 0.0 0.059203 0.934212 0.006585 0.051802 0.927201 0.0 0.020996 0.014541 0.055351 0.930108 0.0 0.616296 0.111029 0.035724 0.236951 0.0 0.044947 0.753053 0.202 0.068848 0.673497 0.021942 0.235714 0.17179 0.05909 0.737214 0.031906 MOTIF Hindbrain_E12.5_H3K4me2_93_101_0.518_1.350524e-26 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.261447 0.057338 0.6291 0.052115 0.011428 0.982899 0.0 0.005673 0.871139 0.0 0.087321 0.04154 0.004837 0.045912 0.94925 0.0 0.342624 0.484486 0.00601 0.16688 0.066913 0.0 0.893631 0.039456 0.765937 0.0 0.025151 0.208912 0.009387 0.049446 0.891558 0.049608 0.0515 0.926551 0.017483 0.004466 0.291212 0.214553 0.082108 0.412127 MOTIF Hindbrain_E16.5_H3K4me2_72_96_0.555_9.302444e-165 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.277193 0.0166 0.601783 0.104424 0.014826 0.985174 0.0 0.0 0.897045 0.038899 0.064056 0.0 0.0 0.053254 0.943509 0.003237 0.047924 0.684791 0.053696 0.213589 0.081408 0.049625 0.862757 0.006209 0.593338 0.046164 0.112375 0.248123 0.007449 0.014366 0.978185 0.0 0.010727 0.798358 0.005525 0.185391 MOTIF Forebrain_E15.5_H3K4me2_73_80_0.538_1.264267e-65 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.440108 0.0 0.559892 0.0 0.010688 0.059737 0.562422 0.367153 0.024117 0.894968 0.080915 0.0 0.937217 0.042317 0.020466 0.0 0.0 0.052012 0.947988 0.0 0.05746 0.892922 0.01682 0.032797 0.064041 0.099771 0.836188 0.0 0.646088 0.046925 0.0 0.306986 0.0 0.0 0.982231 0.017769 MOTIF Intestine_E15.5_H3K4me2_40_61_0.586_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.015747 0.968663 0.01559 0.0 0.023056 0.058993 0.116002 0.801949 0.031292 0.968708 0.0 0.0 0.035693 0.0 0.90925 0.055057 0.0 0.813107 0.186893 0.0 0.110766 0.130613 0.0 0.75862 0.0 0.0 1.0 0.0 0.04214 0.891948 0.015913 0.049999 0.209299 0.367365 0.0 0.423336 MOTIF Stomach_P0_H3K9ac_68_65_0.546_7.260763e-38 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.023469 0.93407 0.042462 0.0 0.024502 0.0 0.058496 0.917003 0.008291 0.88478 0.106929 0.0 0.017562 0.0 0.726151 0.256287 0.0 0.968141 0.031859 0.0 0.44846 0.075936 0.052907 0.422696 0.0 0.0 1.0 0.0 0.00751 0.938913 0.013429 0.040149 0.037278 0.71919 0.0 0.243532 0.361957 0.05218 0.30895 0.276913