MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Cranio-Facial_E15.5_H3K9me3_33_145_0.519_1.473791e-06 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.259405 0.512966 0.194402 0.033228 0.650489 0.215774 0.049087 0.084649 0.901678 0.055746 0.036783 0.005793 0.873022 0.018428 0.080638 0.027911 0.822469 0.056605 0.120926 0.0 0.020657 0.965714 0.0 0.013629 0.94277 0.040126 0.017103 0.0 0.023804 0.072496 0.043183 0.860517 0.0 0.904725 0.089788 0.005487 0.475823 0.262372 0.011901 0.249904 MOTIF Forebrain_P0_H3K9me3_42_115_0.524_5.177565e-14 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.282034 0.536998 0.180968 0.0 0.915445 0.064033 0.008217 0.012306 0.766367 0.019121 0.172903 0.041608 0.815785 0.048224 0.083349 0.052642 0.9575 0.00747 0.023447 0.011583 0.0 0.961668 0.0 0.038332 0.84139 0.043 0.091068 0.024543 0.0 0.067486 0.140383 0.792131 0.0376 0.904194 0.033458 0.024748 0.629115 0.274004 0.096881 0.0 MOTIF Kidney_P0_H3K9me3_17_39_0.528_6.157557e-08 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.887915 0.0 0.063533 0.048552 0.016066 0.055281 0.149103 0.77955 0.064794 0.10111 0.774288 0.059809 0.813221 0.060845 0.125934 0.0 0.006127 0.105272 0.013984 0.874617 0.126673 0.007696 0.848748 0.016883 0.049019 0.00711 0.005004 0.938868 0.003735 0.074349 0.021941 0.899975 0.003983 0.033813 0.000641 0.961564 0.0 0.00679 0.052362 0.940848 0.001668 0.156809 0.488633 0.35289 MOTIF Heart_E15.5_H3K9me3_40_81_0.522_9.004574e-07 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.745646 0.110817 0.143537 0.0 0.046811 0.101134 0.005257 0.846798 0.10492 0.014578 0.880503 0.0 0.018536 0.005421 0.028151 0.947892 0.0 0.038328 0.0 0.961672 0.02464 0.009273 0.003514 0.962573 0.0 0.006771 0.030088 0.963141 0.005429 0.327352 0.622991 0.044228 0.017504 0.909033 0.012186 0.061277 MOTIF Lung_E14.5_H3K9me3_31_137_0.523_2.305423e-15 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.854937 0.001689 0.14059 0.002783 0.0 0.107353 0.007929 0.884717 0.21939 0.00272 0.738269 0.03962 0.0 0.0 0.0 1.0 0.0 0.052729 0.0 0.947271 0.038731 0.205376 0.002747 0.753146 0.009251 0.004299 0.0345 0.951951 0.018162 0.196989 0.728058 0.056791 0.072783 0.767683 0.08852 0.071014 MOTIF Lung_P0_H3K9me3_12_66_0.534_5.707233e-08 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.831247 0.030691 0.138062 0.0 0.020767 0.101533 0.004869 0.872831 0.048743 0.049339 0.901918 0.0 0.017341 0.063875 0.031502 0.887283 0.05009 0.012119 0.020392 0.917399 0.092561 0.173021 0.115137 0.619282 0.0 0.006338 0.182542 0.81112 0.048696 0.047135 0.823626 0.080542 0.018013 0.782465 0.167223 0.0323 0.103404 0.016459 0.396153 0.483983 MOTIF Heart_E16.5_H3K9me3_64_125_0.526_3.044351e-33 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.96281 0.005929 0.031261 0.0 0.0 0.018634 0.981366 0.0 0.027369 0.896055 0.053362 0.023214 0.87769 0.118689 0.003621 0.0 0.682126 0.0 0.316126 0.001749 0.961021 0.02385 0.009633 0.005496 0.957009 0.015034 0.007082 0.020874 0.061378 0.831136 0.0 0.107486 0.905074 0.0 0.083877 0.011049 0.0 0.363835 0.002458 0.633707 MOTIF Limb_E13.5_H3K9me3_40_63_0.529_3.618454e-29 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.908744 0.0 0.090727 0.000529 0.01628 0.011452 0.972268 0.0 0.039148 0.930854 0.021971 0.008027 0.997383 0.0012 0.000934 0.000483 0.476645 0.0 0.520097 0.003258 0.90114 0.080342 0.012458 0.00606 0.928969 0.0 0.071031 0.0 0.118159 0.834512 0.005459 0.04187 0.866515 0.007889 0.09949 0.026106 0.038788 0.194337 0.0 0.766875 MOTIF Hindbrain_P0_H3K9me3_42_106_0.521_1.258507e-09 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.928669 0.0 0.026544 0.044787 0.014242 0.035177 0.947853 0.002728 0.039221 0.836221 0.077225 0.047333 0.950489 0.049044 0.000467 0.0 0.777935 0.022558 0.1221 0.077408 0.981002 0.000556 0.011281 0.007161 0.785787 0.0 0.208691 0.005522 0.016178 0.784649 0.012056 0.187117 0.732054 0.039599 0.087958 0.140389 0.167886 0.4159 0.008692 0.407521 MOTIF Cranio-Facial_E14.5_H3K9me3_33_62_0.528_1.864691e-34 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.952557 0.002734 0.012206 0.032503 0.003638 0.160386 0.832859 0.003117 0.065032 0.856123 0.056402 0.022443 0.927471 0.047612 0.012325 0.012593 0.753934 0.014282 0.221951 0.009833 0.982305 0.003308 0.005066 0.00932 0.774336 0.007967 0.217697 0.0 0.026235 0.767785 0.000641 0.205339 0.810467 0.015303 0.060584 0.113646 0.280216 0.099656 0.080667 0.539462 0.200264 0.412466 0.165083 0.222187 MOTIF Kidney_E16.5_H3K9me3_38_133_0.528_3.7339e-28 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.804506 0.0 0.195494 0.0 0.018651 0.086099 0.893919 0.001331 0.041788 0.90076 0.045712 0.011739 0.746652 0.246728 0.000589 0.006031 0.692484 0.0 0.306594 0.000923 0.957715 0.028998 0.000826 0.012462 0.806455 0.011341 0.135937 0.046267 0.031936 0.915207 0.005434 0.047423 0.922095 0.0 0.072986 0.004919 MOTIF Heart_P0_H3K9me3_57_92_0.521_1.363449e-18 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.863687 0.0 0.123352 0.012962 0.030964 0.048311 0.91994 0.000784 0.055224 0.830207 0.043352 0.071217 0.927167 0.063845 0.004715 0.004274 0.773972 0.00697 0.211205 0.007853 0.909716 0.061421 0.016678 0.012186 0.747645 0.011179 0.230046 0.01113 0.073924 0.751199 0.025236 0.149641 0.89486 0.019803 0.056238 0.029099 0.130731 0.174526 0.0 0.694743 MOTIF Limb_E14.5_H3K9me3_33_121_0.525_6.041342e-15 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.846414 0.006952 0.133272 0.013361 0.015784 0.052017 0.932199 0.0 0.032637 0.89764 0.045811 0.023912 0.901502 0.075523 0.008108 0.014868 0.742514 0.030286 0.218827 0.008373 0.976447 0.000806 0.021419 0.001328 0.667209 0.008938 0.314886 0.008968 0.06735 0.788437 0.010033 0.134179 0.925115 0.00497 0.024402 0.045514 0.177099 0.134889 0.043785 0.644228 MOTIF Stomach_E16.5_H3K9me3_42_92_0.526_9.39697e-15 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.213042 0.338728 0.406897 0.041332 0.763215 0.01021 0.059737 0.166838 0.098424 0.01696 0.0 0.884616 0.090314 0.005392 0.904294 0.0 0.004705 0.203247 0.0 0.792048 0.003104 0.0 0.0 0.996896 0.018397 0.341325 0.0 0.640278 0.014095 0.021123 0.090776 0.874006 0.00674 0.101257 0.879995 0.012009 0.016088 0.974567 0.0 0.009346 MOTIF Cranio-Facial_E15.5_H3K9me3_25_163_0.522_3.987225e-10 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.02 0.014 0.965 0.001 0.926 0.001 0.072 0.001 0.058 0.001 0.001 0.94 0.041 0.001 0.957 0.001 0.001 0.048 0.001 0.95 0.014 0.012 0.001 0.973 0.001 0.047 0.001 0.951 0.001 0.001 0.001 0.997 0.014 0.001 0.979 0.006 0.001 0.981 0.008 0.01 0.001 0.001 0.001 0.997 0.591 0.001 0.407 0.001 MOTIF Kidney_E16.5_H3K9me3_52_177_0.524_1.828722e-34 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.001 0.997 0.001 0.185 0.813 0.001 0.001 0.997 0.001 0.001 0.001 0.902 0.001 0.096 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.226 0.001 0.772 0.001 0.997 0.001 0.001 MOTIF Hindbrain_P0_H3K9me3_35_167_0.522_4.069086e-09 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.026 0.962 0.011 0.934 0.001 0.064 0.001 0.008 0.011 0.001 0.98 0.013 0.001 0.985 0.001 0.011 0.113 0.001 0.875 0.001 0.008 0.001 0.99 0.001 0.006 0.006 0.987 0.001 0.001 0.001 0.997 0.001 0.084 0.828 0.087 0.007 0.991 0.001 0.001 0.01 0.001 0.001 0.988 0.208 0.001 0.79 0.001 MOTIF Heart_E14.5_H3K9me3_83_176_0.514_4.829302e-22 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.854 0.01 0.135 0.997 0.001 0.001 0.001 0.024 0.001 0.947 0.028 0.126 0.846 0.001 0.027 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.942 0.001 0.056 0.001 0.001 0.974 0.001 0.024 0.965 0.001 0.027 0.007 0.01 0.099 0.001 0.89 0.019 0.876 0.023 0.082 MOTIF Heart_P0_H3K9me3_70_164_0.516_2.215369e-22 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.822 0.003 0.174 0.997 0.001 0.001 0.001 0.023 0.006 0.97 0.001 0.111 0.873 0.011 0.005 0.996 0.001 0.002 0.001 0.991 0.007 0.001 0.001 0.971 0.013 0.015 0.001 0.946 0.001 0.052 0.001 0.001 0.933 0.001 0.065 0.96 0.008 0.013 0.019 0.01 0.074 0.001 0.915 0.009 0.937 0.013 0.041 MOTIF Limb_E13.5_H3K9me3_82_164_0.519_1.078074e-52 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.829 0.001 0.169 0.997 0.001 0.001 0.001 0.001 0.001 0.994 0.004 0.109 0.882 0.001 0.008 0.985 0.001 0.013 0.001 0.996 0.002 0.001 0.001 0.973 0.01 0.016 0.001 0.962 0.001 0.034 0.003 0.005 0.963 0.001 0.031 0.98 0.006 0.013 0.001 0.001 0.143 0.009 0.847 0.008 0.964 0.009 0.019 MOTIF Liver_P0_H3K9me3_80_169_0.513_2.052718e-14 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.848 0.001 0.15 0.993 0.001 0.001 0.005 0.048 0.001 0.95 0.001 0.194 0.804 0.001 0.001 0.981 0.017 0.001 0.001 0.982 0.001 0.016 0.001 0.969 0.014 0.016 0.001 0.946 0.008 0.038 0.008 0.001 0.967 0.008 0.024 0.991 0.001 0.007 0.001 0.001 0.038 0.001 0.96 0.001 0.955 0.004 0.04 MOTIF Stomach_E14.5_H3K9me3_45_167_0.519_6.691302e-08 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.045 0.001 0.953 0.001 0.932 0.001 0.057 0.01 0.001 0.015 0.004 0.98 0.055 0.001 0.936 0.008 0.001 0.026 0.021 0.952 0.001 0.01 0.001 0.988 0.015 0.001 0.015 0.969 0.011 0.015 0.009 0.965 0.001 0.018 0.91 0.071 0.004 0.994 0.001 0.001 0.008 0.001 0.015 0.976 0.206 0.015 0.778 0.001 MOTIF Kidney_P0_H3K9me3_23_160_0.525_4.883676e-11 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.077 0.009 0.913 0.001 0.92 0.001 0.04 0.039 0.001 0.02 0.001 0.978 0.008 0.001 0.978 0.013 0.001 0.003 0.001 0.995 0.001 0.006 0.001 0.992 0.001 0.001 0.001 0.997 0.001 0.046 0.001 0.952 0.001 0.001 0.893 0.105 0.003 0.99 0.001 0.006 0.001 0.001 0.001 0.997 0.172 0.021 0.8 0.007 MOTIF Stomach_E16.5_H3K9me3_64_170_0.518_8.615901e-14 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.01 0.799 0.006 0.185 0.993 0.005 0.001 0.001 0.019 0.022 0.957 0.002 0.098 0.858 0.001 0.043 0.983 0.011 0.005 0.001 0.993 0.001 0.001 0.005 0.986 0.001 0.012 0.001 0.981 0.007 0.011 0.001 0.009 0.959 0.001 0.031 0.971 0.013 0.013 0.003 0.043 0.063 0.001 0.893 0.001 0.962 0.01 0.027 MOTIF Midbrain_P0_H3K9me3_50_167_0.521_4.145578e-13 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.029 0.679 0.005 0.287 0.997 0.001 0.001 0.001 0.069 0.234 0.636 0.061 0.159 0.769 0.028 0.044 0.606 0.2 0.018 0.176 0.745 0.061 0.148 0.046 0.951 0.044 0.004 0.001 0.718 0.042 0.109 0.131 0.007 0.721 0.001 0.271 0.988 0.002 0.001 0.009 0.074 0.228 0.042 0.656 0.036 0.672 0.075 0.217 MOTIF Cranio-Facial_E13.5_H3K9me3_25_163_0.529_1.105418e-57 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.682 0.014 0.303 0.926 0.006 0.042 0.026 0.019 0.074 0.831 0.076 0.177 0.661 0.105 0.057 0.747 0.148 0.012 0.093 0.732 0.037 0.2 0.031 0.871 0.018 0.082 0.029 0.803 0.025 0.141 0.031 0.005 0.605 0.035 0.355 0.652 0.039 0.109 0.2 0.12 0.348 0.024 0.508 0.057 0.449 0.042 0.453 MOTIF Lung_E16.5_H3K9me3_65_165_0.519_3.129035e-13 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.02 0.497 0.144 0.339 0.842 0.007 0.02 0.131 0.066 0.157 0.593 0.184 0.328 0.49 0.167 0.015 0.601 0.17 0.116 0.113 0.827 0.017 0.136 0.02 0.714 0.148 0.114 0.024 0.536 0.173 0.279 0.012 0.205 0.536 0.02 0.239 0.54 0.174 0.123 0.163 0.127 0.325 0.062 0.486 0.076 0.464 0.151 0.309 MOTIF Forebrain_P0_H3K9me3_53_167_0.522_4.955521e-07 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.177 0.057 0.74 0.026 0.66 0.048 0.251 0.041 0.04 0.126 0.133 0.701 0.212 0.031 0.709 0.048 0.03 0.234 0.052 0.684 0.021 0.2 0.035 0.744 0.071 0.072 0.046 0.811 0.032 0.157 0.068 0.743 0.021 0.119 0.63 0.23 0.093 0.566 0.167 0.174 0.015 0.039 0.028 0.918 0.359 0.138 0.482 0.021 MOTIF Lung_P0_H3K9me3_22_159_0.527_1.931709e-10 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.226 0.116 0.641 0.017 0.631 0.154 0.195 0.02 0.07 0.156 0.047 0.727 0.214 0.108 0.638 0.04 0.073 0.187 0.134 0.606 0.049 0.109 0.054 0.788 0.069 0.036 0.038 0.857 0.048 0.04 0.184 0.728 0.027 0.069 0.642 0.262 0.079 0.796 0.087 0.038 0.044 0.05 0.018 0.888 0.307 0.026 0.614 0.053 MOTIF Limb_E14.5_H3K9me3_55_163_0.518_1.573204e-22 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.264 0.427 0.083 0.225 0.853 0.015 0.071 0.061 0.213 0.022 0.715 0.05 0.361 0.36 0.078 0.201 0.725 0.122 0.061 0.092 0.725 0.131 0.084 0.06 0.505 0.311 0.111 0.073 0.614 0.122 0.137 0.127 0.118 0.51 0.082 0.29 0.743 0.034 0.084 0.139 0.045 0.439 0.098 0.418 0.05 0.598 0.054 0.298 MOTIF Stomach_P0_H3K9me3_10_165_0.535_7.319231e-06 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.013 0.625 0.154 0.208 0.881 0.001 0.001 0.117 0.068 0.064 0.799 0.069 0.347 0.578 0.042 0.033 0.796 0.08 0.028 0.096 0.648 0.061 0.267 0.024 0.743 0.097 0.126 0.034 0.445 0.071 0.216 0.269 0.229 0.555 0.019 0.197 0.792 0.039 0.082 0.087 0.195 0.339 0.123 0.343 0.001 0.54 0.027 0.432