MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Hindbrain_E12.5_H3K4me3_47_49_0.615_7.256888e-254 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.24312 0.078371 0.63721 0.0413 0.016526 0.310929 0.347946 0.324599 0.02431 0.905534 0.067171 0.002984 0.042977 0.053618 0.846657 0.056748 0.0 0.964511 0.009334 0.026155 0.01515 0.011637 0.065518 0.907695 0.064343 0.086331 0.035218 0.814108 0.0 0.981184 0.0 0.018816 0.0 0.989663 0.010337 0.0 0.0 0.158692 0.311842 0.529466 MOTIF Forebrain_E12.5_H3K4me3_31_57_0.662_8.077973e-321 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.085959 0.693297 0.044958 0.175787 0.008507 0.904464 0.048284 0.038746 0.291028 0.048164 0.631282 0.029525 0.0 0.770504 0.021086 0.20841 0.052564 0.016136 0.049543 0.881757 0.09011 0.013119 0.090894 0.805878 0.002616 0.98462 0.0 0.012765 0.008025 0.981403 0.0 0.010572 0.027134 0.09812 0.807134 0.067612 MOTIF Liver_E11.5_H3K4me3_43_44_0.635_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.071767 0.735805 0.075545 0.116883 0.145843 0.674452 0.161348 0.018357 0.219913 0.04093 0.666928 0.072229 0.0 0.798533 0.034747 0.16672 0.024332 0.0 0.044671 0.930997 0.047859 0.031822 0.070553 0.849765 0.001365 0.988762 0.0 0.009873 0.017257 0.927618 0.032199 0.022926 0.023796 0.212535 0.726937 0.036733 MOTIF Heart_E14.5_H3K4me3_52_90_0.599_1.995619e-274 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.531221 0.468779 0.0 0.0 0.021132 0.165048 0.791762 0.022058 0.024443 0.735843 0.03078 0.208935 0.254918 0.621508 0.088389 0.035185 0.277934 0.033083 0.667168 0.021815 0.008592 0.845157 0.012006 0.134246 0.010224 0.013688 0.058575 0.917513 0.040286 0.075861 0.101016 0.782837 0.001884 0.989099 0.0 0.009016 MOTIF Forebrain_E11.5_H3K4me3_72_75_0.582_8.639733e-103 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.11187 0.092683 0.772384 0.023063 0.088811 0.796569 0.046283 0.068336 0.170463 0.716722 0.037999 0.074816 0.299263 0.042931 0.639882 0.017923 0.002333 0.944861 0.006695 0.04611 0.06144 0.010587 0.071215 0.856757 0.036635 0.052805 0.06919 0.84137 0.003657 0.98842 0.0 0.007923 0.002249 0.892545 0.053725 0.051481 0.05328 0.509661 0.121636 0.315423 MOTIF Heart_E12.5_H3K4me3_50_58_0.592_9.576677e-197 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.149405 0.538884 0.0 0.311711 0.062562 0.087265 0.830448 0.019725 0.022942 0.751759 0.035443 0.189856 0.231743 0.679686 0.042402 0.046169 0.190898 0.098118 0.681126 0.029857 0.009874 0.838285 0.016279 0.135561 0.074664 0.016187 0.076479 0.832671 0.024773 0.010349 0.054937 0.909942 0.001997 0.960717 0.008577 0.028709 0.0 0.974885 0.008897 0.016219 MOTIF Neural-Tube_E12.5_H3K4me3_60_112_0.588_1.966681e-140 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.267156 0.036109 0.696735 0.0 0.149669 0.716261 0.086183 0.047887 0.319059 0.665603 0.0 0.015338 0.019121 0.0 0.943337 0.037542 0.022916 0.904261 0.047304 0.025519 0.013033 0.0 0.042642 0.944326 0.15382 0.109677 0.058539 0.677965 0.0 1.0 0.0 0.0 0.0 1.0 0.0 0.0 MOTIF Forebrain_E12.5_H3K27ac_67_39_0.512_1.22381e-12 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.086908 0.794678 0.076909 0.041505 0.116514 0.726013 0.135205 0.022268 0.146235 0.034762 0.27526 0.543743 0.002446 0.827225 0.107626 0.062703 0.033066 0.040978 0.062862 0.863093 0.009836 0.04345 0.032598 0.914116 0.014099 0.924348 0.003386 0.058168 0.006069 0.97877 0.002467 0.012695 0.029226 0.755722 0.130806 0.084246 0.040626 0.566799 0.226759 0.165816 0.077527 0.103919 0.676177 0.142376 MOTIF Heart_P0_H3K27ac_90_37_0.506_0.000146483 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.755931 0.122313 0.046075 0.075681 0.409071 0.096043 0.46542 0.029465 0.0 0.324113 0.66347 0.012417 0.05585 0.002968 0.941182 0.0 0.026621 0.018144 0.946335 0.0089 0.817346 0.119467 0.054669 0.008518 0.788859 0.150577 0.017883 0.042681 0.179945 0.112923 0.704001 0.003132 0.602626 0.227526 0.005208 0.16464 0.014289 0.086326 0.889673 0.009712 0.027121 0.097195 0.864719 0.010965 0.737973 0.104118 0.075643 0.082266 MOTIF Liver_E13.5_H3K27ac_11_150_0.545_2.66917e-232 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.207 0.488 0.231 0.074 0.142 0.645 0.212 0.001 0.001 0.095 0.903 0.001 0.182 0.099 0.718 0.001 0.997 0.001 0.001 0.001 0.674 0.046 0.247 0.033 0.237 0.261 0.419 0.083 0.06 0.429 0.187 0.324 0.17 0.308 0.453 0.069 0.233 0.198 0.442 0.127 MOTIF Midbrain_P0_H3K27ac_45_66_0.541_7.97081e-52 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.03386 0.869655 0.027184 0.069301 0.077431 0.832649 0.051677 0.038244 0.262638 0.022743 0.675797 0.038822 0.070312 0.563992 0.035754 0.329942 0.032153 0.0 0.047528 0.92032 0.019337 0.010696 0.011862 0.958105 0.0 0.756654 0.002222 0.241125 0.003913 0.940196 0.042009 0.013882 0.022458 0.728349 0.179849 0.069344 0.0 0.104952 0.43845 0.456598 MOTIF Liver_E15.5_H3K4me2_33_38_0.591_7.137504e-317 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.197202 0.270832 0.037252 0.494714 0.173407 0.736849 0.041642 0.048102 0.235263 0.764737 0.0 0.0 0.073609 0.0 0.886791 0.039601 0.012807 0.854327 0.056379 0.076487 0.08632 0.0 0.112552 0.801128 0.014862 0.100318 0.0 0.88482 0.0 1.0 0.0 0.0 0.0 0.984603 0.0 0.015397 0.0 0.0 0.919794 0.080206 MOTIF Cranio-Facial_E14.5_H3K4me2_28_65_0.605_3.094793e-315 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.010294 0.780825 0.208881 0.0 0.195925 0.700365 0.037202 0.066508 0.013386 0.0 0.95022 0.036394 0.0 0.56386 0.034009 0.402131 0.019362 0.0 0.025907 0.954731 0.069106 0.048774 0.0 0.88212 0.0 1.0 0.0 0.0 0.0 0.89465 0.10535 0.0 0.027152 0.141078 0.752353 0.079417 MOTIF Intestine_E16.5_H3K4me2_47_57_0.585_2.805439e-268 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.023896 0.901727 0.074377 0.0 0.229677 0.631602 0.060918 0.077803 0.317343 0.011833 0.662297 0.008528 0.013396 0.753464 0.035951 0.197188 0.025328 0.0 0.045909 0.928764 0.007996 0.0 0.0 0.992004 0.0 0.982946 0.0 0.017054 0.0 0.936408 0.048861 0.014731 0.038045 0.099631 0.728007 0.134317 0.0 0.483481 0.316888 0.199631 MOTIF Liver_E11.5_H3K4me2_30_42_0.588_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.040906 0.868947 0.090147 0.0 0.028892 0.870267 0.036623 0.064218 0.3339 0.023625 0.642475 0.0 0.0 0.685091 0.005587 0.309322 0.043123 0.006113 0.066506 0.884257 0.098609 0.049674 0.0 0.851717 0.0 0.987934 0.007093 0.004973 0.004774 0.979885 0.008253 0.007088 0.034331 0.10506 0.793777 0.066833 MOTIF Intestine_E14.5_H3K4me2_34_58_0.608_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.097799 0.693978 0.044409 0.163813 0.136376 0.724621 0.056537 0.082466 0.160852 0.071822 0.758013 0.009314 0.00976 0.735277 0.038405 0.216558 0.0 0.022986 0.095268 0.881746 0.04214 0.023765 0.00779 0.926304 0.001703 0.990602 0.0 0.007695 0.0 0.979414 0.006623 0.013963 0.14993 0.082691 0.688054 0.079325 MOTIF Liver_E16.5_H3K4me2_45_48_0.574_1.750957e-309 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.091122 0.765688 0.01463 0.12856 0.206332 0.696785 0.04152 0.055364 0.182366 0.061155 0.732405 0.024074 0.003855 0.797912 0.031787 0.166445 0.038384 0.003043 0.078291 0.880282 0.022389 0.054749 0.030489 0.892374 0.0 0.991444 0.0 0.008556 0.005695 0.932259 0.050408 0.011637 0.149572 0.064668 0.63336 0.152399 MOTIF Midbrain_E14.5_H3K4me2_39_61_0.610_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.962228 0.037772 0.0 0.337776 0.0 0.61952 0.042705 0.0 0.809641 0.007771 0.182588 0.105535 0.0 0.059033 0.835432 0.215473 0.019004 0.0 0.765523 0.0 0.986188 0.0 0.013812 0.0 0.939459 0.024257 0.036284 0.039563 0.018145 0.843877 0.098415 0.0 0.626516 0.122488 0.250996 MOTIF Stomach_E16.5_H3K4me2_4_152_0.668_1.906e-312 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.076 0.786 0.073 0.065 0.08 0.082 0.811 0.027 0.069 0.828 0.065 0.038 0.083 0.037 0.808 0.072 0.049 0.066 0.858 0.027 0.794 0.092 0.07 0.044 0.754 0.059 0.131 0.056 0.072 0.05 0.851 0.027 0.078 0.759 0.083 0.08 0.064 0.12 0.752 0.064 MOTIF Forebrain_E13.5_H3K9ac_5_150_0.636_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.066 0.757 0.088 0.089 0.072 0.108 0.764 0.056 0.083 0.811 0.064 0.042 0.077 0.05 0.806 0.067 0.035 0.083 0.853 0.029 0.795 0.079 0.077 0.049 0.799 0.053 0.091 0.057 0.03 0.06 0.879 0.031 0.056 0.778 0.075 0.091 0.068 0.096 0.757 0.079 MOTIF Heart_P0_H3K9ac_9_151_0.629_0 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.166 0.751 0.082 0.001 0.201 0.001 0.797 0.001 0.131 0.55 0.169 0.15 0.001 0.001 0.189 0.809 0.001 0.001 0.001 0.997 0.001 0.607 0.097 0.295 0.135 0.627 0.19 0.048 0.213 0.001 0.654 0.132 MOTIF Hindbrain_E13.5_H3K9ac_64_91_0.546_1.919791e-158 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.041934 0.088552 0.82975 0.039764 0.085687 0.66927 0.0 0.245043 0.037544 0.857523 0.082795 0.022138 0.201696 0.12014 0.62402 0.054145 0.008781 0.964812 0.0 0.026408 0.166511 0.0 0.028227 0.805262 0.072197 0.0 0.161661 0.766142 0.004412 0.71515 0.0 0.280439 0.0 0.990147 0.0 0.009853 MOTIF Heart_E14.5_H3K9ac_47_50_0.552_5.16178e-164 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.051855 0.920365 0.02778 0.0 0.039158 0.795879 0.025556 0.139407 0.281002 0.017115 0.681522 0.020361 0.008102 0.70647 0.02511 0.260318 0.074148 0.01696 0.070032 0.838859 0.004705 0.030278 0.017232 0.947785 0.005321 0.994679 0.0 0.0 0.0 0.964958 0.010598 0.024444 0.199438 0.035329 0.618559 0.146674 MOTIF Liver_E14.5_H3K9ac_26_18_0.602_4.98636e-289 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.456694 0.315823 0.016701 0.210782 0.02066 0.389069 0.388035 0.202235 0.068233 0.741886 0.083498 0.106383 0.170212 0.601547 0.192803 0.035438 0.218552 0.034101 0.704332 0.043016 0.007398 0.865633 0.038813 0.088155 0.021763 0.025478 0.072379 0.880381 0.039437 0.065648 0.01716 0.877755 0.0 0.995158 0.0 0.004842 0.003549 0.958338 0.024367 0.013746 0.027744 0.075415 0.820783 0.076057 MOTIF Cranio-Facial_E12.5_H3K9ac_28_43_0.593_6.6994e-268 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.085636 0.669998 0.066142 0.178223 0.050122 0.880885 0.030782 0.038212 0.203471 0.028387 0.741272 0.026869 0.0 0.83508 0.036251 0.128669 0.027815 0.002891 0.092508 0.876785 0.066357 0.039442 0.048418 0.845784 0.005513 0.992015 0.0 0.002472 0.004789 0.900417 0.074713 0.020082 0.024331 0.05263 0.585195 0.337845 MOTIF Liver_E12.5_H3K9ac_35_40_0.565_1.138645e-172 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.119911 0.648147 0.108547 0.123395 0.135083 0.784752 0.067862 0.012303 0.211876 0.092794 0.678658 0.016672 0.002935 0.820151 0.05646 0.120454 0.021445 0.011453 0.049325 0.917777 0.010369 0.048196 0.022094 0.919341 0.010456 0.967267 0.0 0.022278 0.004584 0.987346 0.0 0.008069 0.070525 0.306141 0.580466 0.042869 MOTIF Forebrain_E14.5_H3K9ac_33_40_0.592_3.510534e-319 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.070153 0.636438 0.068009 0.2254 0.024335 0.897939 0.056127 0.021599 0.357852 0.039797 0.583399 0.018951 0.005521 0.657475 0.003938 0.333066 0.030658 0.030649 0.051165 0.887528 0.063293 0.044051 0.085794 0.806862 0.004408 0.995592 0.0 0.0 0.0 0.972292 0.007674 0.020034 0.03343 0.08159 0.803567 0.081412 MOTIF Forebrain_E11.5_H3K9ac_45_49_0.588_1.199861e-268 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.02886 0.807856 0.010484 0.1528 0.193648 0.639282 0.112739 0.054332 0.222878 0.021996 0.728784 0.026342 0.008506 0.78045 0.034793 0.176251 0.071946 0.0 0.054789 0.873265 0.072339 0.038798 0.025434 0.863429 0.003735 0.976558 0.0 0.019707 0.0 0.961929 0.004803 0.033268 0.115986 0.116895 0.697763 0.069356 MOTIF Hindbrain_E12.5_H3K9ac_36_51_0.582_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.048161 0.727271 0.035505 0.189063 0.170578 0.748002 0.042829 0.038591 0.314288 0.0 0.65717 0.028543 0.0 0.845315 0.016128 0.138557 0.035028 0.028648 0.083174 0.85315 0.092287 0.018884 0.03058 0.858249 0.005528 0.994472 0.0 0.0 0.016018 0.962958 0.008204 0.01282 0.115726 0.064224 0.73123 0.08882 MOTIF Lung_E16.5_H3K9ac_46_48_0.568_3.599149e-244 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.058597 0.756694 0.056835 0.127874 0.197559 0.728085 0.030438 0.043918 0.299244 0.059215 0.624681 0.01686 0.013175 0.813299 0.0 0.173526 0.018303 0.025504 0.051427 0.904766 0.054349 0.078352 0.024355 0.842944 0.002003 0.997997 0.0 0.0 0.005506 0.979624 0.005391 0.009478 0.169955 0.092803 0.567415 0.169827 MOTIF Midbrain_E16.5_H3K9ac_70_72_0.557_1.619105e-124 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.390769 0.504478 0.029422 0.075332 0.098202 0.857796 0.024529 0.019473 0.013197 0.841215 0.057623 0.087965 0.044554 0.0285 0.903357 0.023589 0.008232 0.396931 0.030622 0.564216 0.035713 0.011616 0.04208 0.910591 0.0 0.030007 0.064802 0.905191 0.0 1.0 0.0 0.0 0.0 0.96757 0.0 0.03243