MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Kidney_E15.5_H3K9me3_93_170_0.507_0.009542076 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.979 0.001 0.019 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 MOTIF Hindbrain_E16.5_H3K9me3_48_171_0.525_1.254887e-20 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.1 0.1 0.7 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 0.1 0.7 0.1 0.1 0.1 0.1 0.1 0.7 0.1 0.7 0.1 0.1 0.1 0.1 0.1 0.7 0.1 0.1 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 0.7 0.1 0.1 MOTIF Neural-Tube_E12.5_H3K9me3_101_99_0.507_1.89634e-14 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.0 0.248366 0.574365 0.177269 0.081159 0.869998 0.007166 0.041677 0.005935 0.945412 0.042496 0.006158 0.852847 0.018748 0.012082 0.116323 0.016409 0.048265 0.920486 0.01484 0.691163 0.048298 0.124778 0.13576 0.139244 0.009896 0.811647 0.039214 0.132385 0.07102 0.020102 0.776493 0.005803 0.26383 0.007396 0.72297 0.009814 0.970884 0.005199 0.014103 0.114844 0.249582 0.053756 0.581818 MOTIF Midbrain_E15.5_H3K9me3_40_84_0.527_7.010227e-12 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.120124 0.5658 0.024119 0.289957 0.0 0.939153 0.052763 0.008084 0.941212 0.005066 0.010986 0.042735 0.063632 0.033767 0.84574 0.056862 0.867162 0.001326 0.014384 0.117128 0.141374 0.011003 0.840099 0.007523 0.056736 0.053691 0.061191 0.828382 0.224956 0.12447 0.0 0.650574 0.0 0.972611 0.01746 0.009928 MOTIF Limb_E14.5_H3K9me3_76_98_0.509_5.326509e-10 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.042285 0.712642 0.030372 0.214701 0.004929 0.944538 0.009034 0.0415 0.949242 0.039955 0.010802 0.0 0.014006 0.027039 0.946134 0.012821 0.860059 0.058197 0.034079 0.047666 0.208235 0.001795 0.758922 0.031048 0.195906 0.016744 0.030682 0.756668 0.03984 0.232136 0.024632 0.703393 0.113102 0.769761 0.00284 0.114297 MOTIF Hindbrain_E16.5_H3K9me3_33_52_0.528_1.001457e-17 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.103416 0.62048 0.024426 0.251678 0.004522 0.874004 0.118678 0.002796 0.833516 0.024467 0.026072 0.115945 0.033461 0.054876 0.907928 0.003734 0.769284 0.025604 0.024434 0.180678 0.021006 0.004755 0.939101 0.035138 0.060758 0.240878 0.033739 0.664626 0.023 0.19362 0.005986 0.777395 0.009441 0.950426 0.009953 0.030181 MOTIF Forebrain_P0_H3K9me3_74_64_0.517_1.633802e-11 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.153279 0.564601 0.008828 0.273292 0.009299 0.948119 0.010141 0.032442 0.899563 0.027744 0.00817 0.064523 0.018822 0.13203 0.793335 0.055813 0.895956 0.028167 0.019688 0.056189 0.140474 0.033726 0.794364 0.031436 0.088763 0.038512 0.116908 0.755817 0.019971 0.137462 0.0153 0.827267 0.188584 0.781664 0.029752 0.0 MOTIF Cranio-Facial_E12.5_H3K9me3_63_63_0.516_1.335927e-16 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.118475 0.123443 0.296144 0.461938 0.039113 0.806771 0.009485 0.144631 0.01085 0.927632 0.05954 0.001979 0.804445 0.01572 0.010817 0.169018 0.004611 0.047259 0.920386 0.027745 0.695216 0.043324 0.126898 0.134562 0.044204 0.034242 0.858728 0.062825 0.153997 0.160082 0.07059 0.615331 0.010306 0.169259 0.022593 0.797842 0.035163 0.934434 0.012255 0.018148 MOTIF Cranio-Facial_E14.5_H3K9me3_58_119_0.520_1.591514e-26 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.071821 0.640823 0.050272 0.237084 0.013621 0.960984 0.014375 0.01102 0.865065 0.022885 0.00978 0.102269 0.005475 0.024886 0.859221 0.110417 0.652267 0.044078 0.132555 0.1711 0.150296 0.028437 0.808416 0.012851 0.204218 0.070096 0.014182 0.711504 0.000247 0.099459 0.009642 0.890652 0.025597 0.956421 0.002579 0.015404 MOTIF Forebrain_E13.5_H3K9me3_36_74_0.528_5.286451e-24 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.085454 0.665191 0.016952 0.232404 0.003689 0.919579 0.076511 0.000221 0.887019 0.021409 0.014866 0.076705 0.032272 0.042539 0.888281 0.036907 0.781162 0.014687 0.06832 0.13583 0.079883 0.01663 0.825781 0.077706 0.271002 0.077097 0.026163 0.625739 0.017868 0.205806 0.006126 0.7702 0.022252 0.947265 0.012684 0.017798 MOTIF Forebrain_E12.5_H3K9me3_62_104_0.520_9.517889e-20 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.081105 0.76365 0.004163 0.151082 0.005767 0.929158 0.065075 0.0 0.855801 0.023528 0.017649 0.103022 0.019183 0.027435 0.944452 0.00893 0.734912 0.021989 0.097637 0.145462 0.101356 0.127672 0.699212 0.071759 0.304592 0.063775 0.014163 0.61747 0.030085 0.157233 0.010039 0.802643 0.019659 0.962379 0.002023 0.015938 MOTIF Midbrain_E14.5_H3K9me3_37_86_0.521_1.031645e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.075835 0.666842 0.017348 0.239975 0.003508 0.939215 0.040366 0.01691 0.873772 0.008266 0.008932 0.10903 0.029101 0.040422 0.886738 0.043739 0.766568 0.016697 0.046122 0.170612 0.122272 0.100885 0.708779 0.068064 0.196882 0.076427 0.030229 0.696462 0.008586 0.186496 0.005506 0.799412 0.071084 0.922116 0.0068 0.0 MOTIF Hindbrain_E15.5_H3K9me3_55_52_0.524_5.060593e-17 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.011456 0.699913 0.003797 0.284834 0.001329 0.919105 0.066844 0.012722 0.923424 0.011725 0.005015 0.059836 0.042454 0.161627 0.7912 0.004718 0.841208 0.002866 0.015621 0.140304 0.053715 0.072343 0.79794 0.076001 0.193005 0.142075 0.016089 0.648832 0.050808 0.04324 0.028156 0.877796 0.044532 0.901604 0.012545 0.041319 MOTIF Hindbrain_P0_H3K9me3_28_51_0.523_3.776549e-11 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.083574 0.668972 0.017002 0.230452 0.019792 0.963863 0.008642 0.007703 0.933273 0.028069 0.009111 0.029548 0.023362 0.215968 0.703143 0.057526 0.919618 0.015538 0.028599 0.036245 0.110083 0.015244 0.835628 0.039045 0.199887 0.060095 0.072621 0.667398 0.107048 0.134316 0.032521 0.726116 0.078141 0.874889 0.016691 0.030279 MOTIF Hindbrain_E14.5_H3K9me3_63_55_0.517_3.912668e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.028516 0.701074 0.018757 0.251653 0.003252 0.939738 0.033616 0.023393 0.897247 0.017574 0.015899 0.06928 0.039114 0.135752 0.795226 0.029907 0.796012 0.015798 0.067917 0.120273 0.120972 0.013183 0.848607 0.017239 0.238615 0.020042 0.027462 0.713881 0.00984 0.116866 0.022588 0.850706 0.088746 0.894356 0.013994 0.002904 MOTIF Hindbrain_E13.5_H3K9me3_58_53_0.522_2.862467e-27 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.033288 0.780526 0.028643 0.157544 0.008023 0.939283 0.049144 0.00355 0.873338 0.015526 0.012301 0.098834 0.025351 0.148096 0.812723 0.013831 0.758531 0.015769 0.094003 0.131698 0.072832 0.068132 0.808328 0.050708 0.186814 0.091889 0.028261 0.693036 0.048463 0.144735 0.084161 0.722641 0.056363 0.926666 0.007084 0.009887 MOTIF Midbrain_E16.5_H3K9me3_66_27_0.513_3.215651e-23 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.050873 0.741367 0.023806 0.183954 0.002673 0.971042 0.021725 0.004559 0.884265 0.023257 0.015802 0.076676 0.031124 0.11223 0.806208 0.050437 0.811924 0.015572 0.071904 0.100599 0.129485 0.012377 0.803804 0.054333 0.142479 0.167271 0.017094 0.673156 0.040352 0.1176 0.012651 0.829397 0.079555 0.882778 0.004874 0.032793 MOTIF Neural-Tube_E13.5_H3K9me3_124_78_0.505_3.630005e-27 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.069048 0.880378 0.019817 0.030758 0.006708 0.985972 0.001398 0.005922 0.906739 0.018217 0.013943 0.061101 0.008156 0.034576 0.944381 0.012887 0.711049 0.021374 0.099576 0.168001 0.149837 0.070942 0.692643 0.086578 0.235751 0.182237 0.034982 0.54703 0.017976 0.093422 0.039173 0.849429 0.083096 0.892648 0.005512 0.018743 MOTIF Hindbrain_E15.5_H3K9me3_98_113_0.512_9.136948e-13 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.973978 0.0 0.005159 0.020862 0.893283 0.033374 0.015897 0.057446 0.00627 0.99099 0.00274 0.0 0.002721 0.041601 0.0 0.955678 0.0 0.665156 0.255482 0.079362 0.106134 0.038341 0.0 0.855525 0.020157 0.002039 0.940076 0.037728 0.269294 0.001979 0.710367 0.01836 0.162179 0.708737 0.093818 0.035267 MOTIF Heart_E11.5_H3K9me3_81_113_0.509_3.241504e-07 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.510347 0.039066 0.434768 0.015819 0.734346 0.058333 0.16361 0.04371 0.025301 0.968489 0.0 0.006211 0.190607 0.005946 0.08953 0.713917 0.01439 0.981327 0.004283 0.0 0.084762 0.004056 0.141351 0.769831 0.010798 0.009849 0.973328 0.006025 0.090288 0.028818 0.85413 0.026764 0.026374 0.907584 0.041584 0.024457 0.271749 0.0 0.326596 0.401655 MOTIF Forebrain_E13.5_H3K9me3_114_122_0.505_5.510202e-17 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.844097 0.011579 0.14253 0.001794 0.626671 0.046216 0.123359 0.203754 0.041865 0.931651 0.012928 0.013556 0.123617 0.022171 0.00191 0.852302 0.058647 0.899608 0.041745 0.0 0.194264 0.002264 0.042883 0.760589 0.001162 0.016442 0.931291 0.051105 0.04607 0.038677 0.782782 0.132471 0.078883 0.737493 0.069548 0.114075 MOTIF Intestine_E14.5_H3K9me3_105_146_0.505_2.738219e-05 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.632317 0.005277 0.352382 0.010024 0.593631 0.033752 0.161894 0.210723 0.017618 0.94936 0.028926 0.004097 0.224218 0.01788 0.03549 0.722412 0.020169 0.96801 0.01182 0.0 0.055571 0.006567 0.080567 0.857295 0.015973 0.003741 0.957218 0.023068 0.131418 0.130375 0.647325 0.090882 0.036102 0.898977 0.039078 0.025843 MOTIF Neural-Tube_E13.5_H3K9me3_127_54_0.504_9.012901e-14 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.81379 0.016029 0.166844 0.003338 0.516792 0.018271 0.168938 0.295999 0.045694 0.91918 0.030374 0.004751 0.139861 0.010899 0.002355 0.846885 0.002407 0.967431 0.022379 0.007784 0.097604 0.003329 0.069884 0.829183 0.016984 0.001266 0.968047 0.013703 0.019178 0.007242 0.90466 0.06892 0.07943 0.875221 0.038148 0.007201 0.482843 0.006191 0.026959 0.484008 0.274156 0.03853 0.225146 0.462168 MOTIF Forebrain_E11.5_H3K9me3_90_117_0.501_0.0002210518 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.136346 0.205906 0.063082 0.594666 0.708027 0.054755 0.213855 0.023363 0.523332 0.026349 0.267884 0.182435 0.008282 0.949369 0.012948 0.029401 0.109303 0.132658 0.016528 0.741512 0.0277 0.724595 0.223636 0.024069 0.067796 0.01232 0.035737 0.884148 0.008443 0.022782 0.940601 0.028174 0.039421 0.026286 0.906717 0.027576 0.022262 0.78824 0.189498 0.0 MOTIF Cranio-Facial_E15.5_H3K9me3_81_133_0.507_0.00435729 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.732458 0.054616 0.195262 0.017664 0.676076 0.036752 0.069572 0.217601 0.035574 0.915897 0.04113 0.007399 0.052452 0.058257 0.031966 0.857325 0.084328 0.80075 0.094118 0.020804 0.071623 0.011266 0.020511 0.896599 0.029183 0.012908 0.923808 0.034101 0.075904 0.145497 0.682774 0.095825 0.023976 0.764516 0.135068 0.076439 MOTIF Hindbrain_E16.5_H3K9me3_50_65_0.523_6.37523e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.775724 0.050439 0.165209 0.008629 0.648753 0.040187 0.173498 0.137562 0.022327 0.958782 0.002863 0.016028 0.042253 0.022733 0.024704 0.91031 0.016497 0.758657 0.22085 0.003996 0.106098 0.055456 0.03691 0.801536 0.053776 0.004961 0.923171 0.018093 0.103617 0.060109 0.807631 0.028642 0.053993 0.703695 0.183806 0.058506 MOTIF Hindbrain_P0_H3K9me3_73_71_0.514_2.289723e-09 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.815665 0.030322 0.140034 0.013979 0.746787 0.03621 0.057188 0.159815 0.011483 0.927136 0.008521 0.05286 0.11816 0.006651 0.003369 0.87182 0.01334 0.71306 0.256621 0.016979 0.06676 0.009472 0.016585 0.907184 0.00312 0.009617 0.971969 0.015293 0.192104 0.006416 0.661087 0.140392 0.062869 0.651135 0.242077 0.04392 MOTIF Midbrain_E16.5_H3K9me3_88_60_0.508_1.403498e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.779305 0.054394 0.157721 0.008581 0.664412 0.035106 0.096145 0.204337 0.048177 0.909134 0.014326 0.028363 0.040234 0.023807 0.007878 0.928082 0.066459 0.707814 0.189183 0.036544 0.052669 0.018994 0.008932 0.919404 0.027315 0.031787 0.904472 0.036425 0.193071 0.072022 0.64597 0.088936 0.041917 0.801801 0.114435 0.041847 MOTIF Neural-Tube_E15.5_H3K9me3_62_92_0.519_1.665023e-15 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.879665 0.009572 0.105853 0.004911 0.668944 0.034106 0.119344 0.177607 0.052606 0.892039 0.019624 0.03573 0.007672 0.011186 0.00322 0.977923 0.050705 0.660908 0.285462 0.002925 0.045218 0.010085 0.008088 0.936609 0.007135 0.037402 0.928419 0.027043 0.273376 0.037972 0.643183 0.045469 0.037837 0.748357 0.20142 0.012386 MOTIF Hindbrain_E16.5_H3K9me3_66_140_0.518_5.163907e-24 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.825596 0.042074 0.065745 0.066584 0.037623 0.011742 0.909167 0.041468 0.920573 0.003583 0.069895 0.005949 0.080265 0.032081 0.872864 0.01479 0.054062 0.251324 0.016914 0.677699 0.147201 0.053292 0.038423 0.761084 0.004867 0.916532 0.038292 0.040308 0.717625 0.045903 0.015455 0.221017 0.013329 0.030072 0.74481 0.211789 0.369497 0.48034 0.109735 0.040428 MOTIF Hindbrain_E16.5_H3K9me3_35_108_0.527_1.643462e-29 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.034365 0.89173 0.071675 0.002231 0.917796 0.020863 0.051029 0.010313 0.005466 0.004436 0.958399 0.031699 0.743391 0.10104 0.091797 0.063772 0.328316 0.015854 0.633261 0.022569 0.017028 0.211142 0.046084 0.725746 0.0 0.0 0.0 1.0 0.0 0.946816 0.011895 0.041289 0.640207 0.318332 0.041461 0.0 MOTIF Midbrain_E16.5_H3K9me3_73_97_0.512_1.938058e-10 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.858134 0.135209 0.006657 0.94177 0.003901 0.009786 0.044543 0.019589 0.105033 0.857345 0.018033 0.801579 0.066212 0.031106 0.101103 0.113463 0.018527 0.827659 0.040351 0.054724 0.208209 0.00569 0.731377 0.042612 0.042899 0.029309 0.88518 0.018274 0.963214 0.010069 0.008443 0.51214 0.292124 0.01548 0.180255 0.456206 0.272303 0.201212 0.070279