MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Heart_E11.5_H3K4me1_61_33_0.513_1.431642e-17 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.1274 0.0 0.152712 0.719889 0.018142 0.015677 0.96618 0.0 0.067268 0.078525 0.847376 0.006831 0.928003 0.036578 0.035418 0.0 0.038586 0.024669 0.928545 0.0082 0.044443 0.022701 0.865347 0.067509 0.0 0.622265 0.34626 0.031475 0.0 0.015334 0.984666 0.0 0.036183 0.953808 0.0 0.010008 0.015384 0.034143 0.024445 0.926028 0.0 0.0362 0.9638 0.0 MOTIF Midbrain_P0_H3K4me1_28_19_0.530_5.713809e-35 letter-probability matrix: alength= 4 w= 13 nsites= 100 E= 1.0e-1 0.330681 0.282842 0.062661 0.323816 0.009673 0.044321 0.759669 0.186337 0.56762 0.033817 0.387788 0.010775 0.021116 0.657491 0.267067 0.054326 0.863962 0.05226 0.024436 0.059342 0.011716 0.034091 0.875697 0.078496 0.013741 0.934033 0.036143 0.016083 0.063856 0.620688 0.250798 0.064659 0.029775 0.538523 0.214775 0.216928 0.0142 0.898666 0.033192 0.053942 0.019659 0.049853 0.036503 0.893985 0.010683 0.758323 0.064067 0.166927 0.009427 0.933012 0.006875 0.050686 MOTIF Hindbrain_E16.5_H3K27me3_31_115_0.522_4.600808e-08 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.960477 0.0 0.039523 0.0 0.0 0.0 0.985022 0.014978 0.11194 0.866597 0.0 0.021463 0.141118 0.600538 0.224296 0.034048 0.045072 0.84432 0.020994 0.089615 0.021421 0.925811 0.052768 0.0 0.0 0.0 0.029285 0.970715 0.051578 0.658433 0.103605 0.186383 0.0 0.811967 0.188033 0.0 MOTIF Cranio-Facial_E13.5_H3K27ac_56_38_0.521_1.909575e-28 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.968862 0.031138 0.0 0.709413 0.061725 0.147072 0.08179 0.004788 0.00749 0.959107 0.028615 0.089892 0.83455 0.043261 0.032297 0.029804 0.69727 0.224108 0.048819 0.101161 0.414044 0.154921 0.329874 0.001655 0.93275 0.020771 0.044824 0.039622 0.090894 0.029045 0.840438 0.005605 0.905957 0.058928 0.029509 0.0 0.738054 0.252993 0.008953 MOTIF Intestine_E15.5_H3K27ac_66_31_0.519_5.188924e-49 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.030729 0.029614 0.891085 0.048573 0.048324 0.85364 0.035457 0.062579 0.075948 0.686832 0.147029 0.090191 0.045396 0.659736 0.055529 0.239339 0.017602 0.705701 0.052285 0.224411 0.009782 0.013547 0.097949 0.878722 0.004646 0.881595 0.057844 0.055915 0.024076 0.814471 0.056745 0.104708 0.009967 0.900949 0.045896 0.043187 MOTIF Lung_P0_H3K4me1_82_64_0.508_2.357257e-08 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.554665 0.107049 0.029496 0.30879 0.010071 0.037414 0.757948 0.194566 0.013458 0.939443 0.02845 0.018649 0.026754 0.738572 0.212489 0.022184 0.027569 0.63334 0.12248 0.216611 0.027195 0.829241 0.056654 0.08691 0.066733 0.032427 0.01565 0.88519 0.006464 0.905685 0.0 0.087851 0.006551 0.938918 0.019131 0.035401 MOTIF Limb_E13.5_H3K4me1_46_11_0.520_7.223002e-113 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.022691 0.012056 0.803378 0.161875 0.038982 0.849536 0.034256 0.077227 0.041693 0.720251 0.086598 0.151458 0.033341 0.713707 0.075432 0.177521 0.019058 0.8051 0.042619 0.133223 0.067489 0.016426 0.126207 0.789878 0.003919 0.783036 0.151353 0.061692 0.022964 0.859515 0.033313 0.084207 0.014789 0.88785 0.027866 0.069495 MOTIF Intestine_E14.5_H3K4me1_22_6_0.527_1.74455e-96 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.028479 0.020142 0.731101 0.220278 0.03645 0.814286 0.039033 0.110231 0.064726 0.724067 0.07095 0.140258 0.03474 0.746244 0.080544 0.138471 0.023611 0.815529 0.024069 0.136792 0.063664 0.014332 0.121151 0.800853 0.00485 0.802667 0.103682 0.088801 0.016841 0.887542 0.02189 0.073728 0.01584 0.896195 0.031085 0.056879 MOTIF Kidney_E14.5_H3K4me1_23_12_0.528_4.754146e-66 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.02532 0.020471 0.726723 0.227487 0.039321 0.830578 0.045041 0.08506 0.044105 0.720032 0.071625 0.164238 0.03099 0.738993 0.072225 0.157793 0.025736 0.821661 0.040024 0.112579 0.064518 0.020935 0.115466 0.799081 0.006158 0.790645 0.138516 0.064681 0.021974 0.883795 0.017424 0.076807 0.009793 0.905327 0.032125 0.052755 MOTIF Midbrain_E14.5_H3K4me1_36_9_0.525_6.447848e-74 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.028738 0.029542 0.759846 0.181874 0.038458 0.841493 0.030259 0.089789 0.072838 0.703312 0.093023 0.130827 0.028322 0.731814 0.094672 0.145192 0.020513 0.820612 0.026934 0.131941 0.05395 0.030088 0.137965 0.777997 0.004856 0.806213 0.113735 0.075196 0.023455 0.887018 0.040707 0.048819 0.014696 0.88527 0.026808 0.073227 MOTIF Forebrain_E11.5_H3K4me1_72_7_0.515_6.884277e-39 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.02254 0.11885 0.669058 0.189552 0.023313 0.794141 0.033943 0.148602 0.046463 0.731106 0.075794 0.146637 0.018309 0.770584 0.074343 0.136764 0.018179 0.853916 0.01936 0.108544 0.053203 0.017697 0.119291 0.809809 0.004636 0.807048 0.125963 0.062353 0.020493 0.887212 0.018539 0.073756 0.011834 0.853548 0.039153 0.095465 MOTIF Hindbrain_E11.5_H3K4me1_71_9_0.504_6.936987e-22 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.070471 0.107143 0.639874 0.182511 0.013642 0.835636 0.032611 0.118112 0.06086 0.742098 0.060262 0.13678 0.017542 0.781824 0.070311 0.130323 0.018369 0.853278 0.02196 0.106393 0.084147 0.030638 0.126159 0.759057 0.005577 0.787532 0.119776 0.087115 0.010237 0.906349 0.016403 0.067011 0.011043 0.891201 0.023614 0.074142 MOTIF Limb_E11.5_H3K4me1_69_6_0.515_3.254999e-62 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.081304 0.125818 0.613994 0.178884 0.01628 0.826455 0.036751 0.120514 0.056011 0.751992 0.056292 0.135705 0.017641 0.786305 0.059154 0.136901 0.015813 0.847221 0.015697 0.121269 0.084871 0.033698 0.112008 0.769423 0.006394 0.793956 0.104474 0.095177 0.014715 0.901537 0.017837 0.06591 0.012613 0.890791 0.020501 0.076095 MOTIF Midbrain_P0_H3K4me1_95_10_0.502_7.331327e-10 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.048625 0.123582 0.649835 0.177958 0.017365 0.809206 0.034737 0.138692 0.040153 0.723952 0.065018 0.170877 0.019279 0.767232 0.066789 0.1467 0.018473 0.848696 0.021459 0.111372 0.076799 0.026524 0.116822 0.779854 0.008637 0.792279 0.124233 0.074851 0.017414 0.895248 0.016035 0.071302 0.007655 0.90722 0.026257 0.058868 MOTIF Neural-Tube_E11.5_H3K4me1_63_11_0.515_4.114681e-39 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.073598 0.129892 0.641544 0.154967 0.020674 0.824553 0.040063 0.114709 0.033317 0.752949 0.073633 0.140101 0.017775 0.786131 0.064118 0.131977 0.020823 0.833109 0.02962 0.116448 0.073596 0.042354 0.116014 0.768036 0.005598 0.80761 0.097194 0.089598 0.013399 0.894246 0.018612 0.073742 0.01241 0.853732 0.03543 0.098429 MOTIF Cranio-Facial_E12.5_H3K4me1_20_9_0.530_5.865006e-74 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.01067 0.585535 0.400448 0.003347 0.643163 0.12073 0.03098 0.205127 0.014763 0.014911 0.941143 0.029183 0.026875 0.901544 0.048862 0.022719 0.020113 0.92243 0.032876 0.02458 0.044129 0.689036 0.086285 0.180549 0.008807 0.812204 0.019619 0.159371 0.054564 0.041763 0.23875 0.664923 0.004745 0.7363 0.134373 0.124583 0.026886 0.825608 0.075004 0.072502 0.010047 0.574119 0.287213 0.128622 MOTIF Hindbrain_P0_H3K4me1_45_26_0.522_1.358994e-20 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.251777 0.482021 0.253633 0.01257 0.759778 0.064697 0.133979 0.041546 0.006441 0.014109 0.884914 0.094536 0.036007 0.896996 0.032631 0.034366 0.076517 0.858683 0.047112 0.017688 0.053686 0.633682 0.228909 0.083724 0.004693 0.961806 0.006709 0.026793 0.025523 0.013118 0.184249 0.777111 0.001013 0.684996 0.199642 0.11435 0.020457 0.967112 0.003491 0.00894 MOTIF Intestine_P0_H3K4me1_29_80_0.518_4.847487e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.797453 0.043756 0.141937 0.016854 0.001398 0.026574 0.933254 0.038774 0.022298 0.891652 0.033841 0.052209 0.027241 0.888813 0.049718 0.034228 0.11432 0.460702 0.103886 0.321092 0.0 0.914881 0.018843 0.066276 0.069029 0.0 0.034843 0.896128 0.006131 0.698093 0.130377 0.165399 0.0 0.875802 0.086064 0.038134 MOTIF Limb_E12.5_H3K4me1_28_58_0.524_1.699234e-61 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.866347 0.024783 0.023005 0.085865 0.006232 0.021893 0.958819 0.013056 0.01247 0.891912 0.051496 0.044121 0.015869 0.810404 0.15144 0.022288 0.054096 0.56665 0.103257 0.275997 0.00754 0.913545 0.020628 0.058286 0.036419 0.056212 0.058936 0.848433 0.002483 0.550823 0.248028 0.198667 0.026269 0.844253 0.072218 0.05726 MOTIF Limb_E11.5_H3K4me1_38_49_0.525_4.889074e-40 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.698198 0.041733 0.067765 0.192304 0.024839 0.026486 0.895009 0.053666 0.029892 0.898414 0.027596 0.044098 0.01934 0.869648 0.07407 0.036942 0.063713 0.691478 0.085633 0.159175 0.014318 0.823513 0.024028 0.138141 0.057404 0.017323 0.14007 0.785203 0.003936 0.720578 0.21957 0.055916 0.006511 0.912911 0.034385 0.046193 MOTIF Midbrain_E11.5_H3K4me1_16_29_0.533_4.046788e-68 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.734726 0.067365 0.046351 0.151558 0.012662 0.03214 0.876615 0.078583 0.041277 0.880443 0.040923 0.037357 0.022033 0.835595 0.12168 0.020692 0.040243 0.60906 0.068905 0.281792 0.00734 0.870698 0.022106 0.099855 0.014064 0.053108 0.099707 0.833121 0.006846 0.710133 0.224988 0.058033 0.004445 0.84669 0.080038 0.068827 MOTIF Cranio-Facial_E14.5_H3K4me1_36_51_0.524_1.233263e-46 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.752249 0.075724 0.09884 0.073188 0.006446 0.0236 0.884034 0.08592 0.006029 0.914629 0.037633 0.04171 0.022817 0.808997 0.128315 0.039872 0.079766 0.57386 0.089171 0.257203 0.007118 0.878073 0.017184 0.097625 0.007648 0.059253 0.073867 0.859232 0.004911 0.693593 0.197205 0.104291 0.007402 0.896762 0.045081 0.050755 MOTIF Hindbrain_E12.5_H3K4me1_33_60_0.527_5.626611e-60 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.842121 0.036841 0.061662 0.059376 0.018363 0.021721 0.860658 0.099258 0.034001 0.916538 0.025948 0.023512 0.023097 0.787524 0.160387 0.028992 0.035387 0.565958 0.088266 0.310389 0.00186 0.880643 0.013511 0.103986 0.026397 0.032919 0.050637 0.890047 0.004675 0.658662 0.153637 0.183026 0.012224 0.862627 0.036895 0.088253 MOTIF Stomach_E15.5_H3K4me1_31_49_0.526_6.325623e-35 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.717213 0.054352 0.160707 0.067729 0.011216 0.033349 0.868735 0.0867 0.030458 0.891548 0.049519 0.028475 0.035039 0.724755 0.174778 0.065427 0.061541 0.57352 0.090376 0.274563 0.007967 0.860616 0.018054 0.113363 0.048904 0.037181 0.054094 0.859821 0.001655 0.795943 0.121301 0.081101 0.0 0.957368 0.007764 0.034868 MOTIF Stomach_P0_H3K4me1_50_30_0.524_7.45034e-19 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.720047 0.060231 0.046261 0.173461 0.006045 0.043071 0.885672 0.065213 0.024382 0.867843 0.042375 0.065401 0.027677 0.7696 0.164444 0.038278 0.043735 0.653336 0.012409 0.290521 0.003222 0.87385 0.010999 0.111928 0.01662 0.049103 0.012281 0.921996 0.010989 0.682214 0.236772 0.070024 0.004449 0.891453 0.03287 0.071228 0.004159 0.352543 0.46322 0.180078 0.002085 0.057212 0.561321 0.379381 MOTIF Limb_E14.5_H3K4me2_67_170_0.556_8.709968e-90 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.222 0.334 0.401 0.042 0.083 0.235 0.628 0.054 0.001 0.137 0.813 0.049 0.144 0.001 0.854 0.001 0.997 0.001 0.001 0.001 0.09 0.109 0.8 0.001 0.137 0.459 0.375 0.029 0.228 0.319 0.373 0.08 0.026 0.001 0.972 0.001 0.04 0.864 0.095 0.001 0.001 0.001 0.001 0.997 0.001 0.015 0.983 0.001 MOTIF Forebrain_E14.5_H3K4me2_79_54_0.540_6.582432e-89 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.032094 0.072081 0.780058 0.115767 0.00308 0.83663 0.020465 0.139824 0.078645 0.615366 0.06394 0.242049 0.039975 0.77052 0.052559 0.136947 0.050118 0.898785 0.021495 0.029602 0.1002 0.027956 0.0336 0.838245 0.00325 0.833544 0.052258 0.110949 0.040015 0.892784 0.035872 0.031329 0.008663 0.703527 0.163227 0.124584 MOTIF Midbrain_E15.5_H3K4me2_81_66_0.538_2.267371e-76 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.047521 0.030601 0.817299 0.104578 0.010865 0.834276 0.014365 0.140495 0.067156 0.6235 0.282563 0.02678 0.051567 0.747162 0.043222 0.158049 0.073789 0.830751 0.040546 0.054914 0.121457 0.057127 0.010964 0.810452 0.005326 0.869792 0.063772 0.061111 0.043021 0.862959 0.057067 0.036953 0.031721 0.816624 0.073147 0.078509 MOTIF Hindbrain_E12.5_H3K27me3_67_14_0.504_3.816828e-20 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.052688 0.447001 0.467883 0.032428 0.198175 0.661232 0.021376 0.119217 0.021092 0.020615 0.949054 0.009239 0.096127 0.869838 0.024783 0.009252 0.041316 0.712806 0.204029 0.041849 0.013562 0.738264 0.081711 0.166464 0.024736 0.790656 0.144018 0.040591 0.019468 0.027986 0.114694 0.837851 0.008037 0.921468 0.046206 0.024289 0.050152 0.730838 0.145312 0.073699 0.038457 0.847372 0.105155 0.009016 MOTIF Hindbrain_E16.5_H3K27me3_60_29_0.504_0.0001648274 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.026211 0.0 0.903294 0.070495 0.041067 0.92417 0.019069 0.015694 0.184184 0.586739 0.179192 0.049885 0.052013 0.558229 0.066527 0.323231 0.019484 0.932981 0.007969 0.039566 0.005793 0.014142 0.123605 0.85646 0.010627 0.884007 0.076241 0.029125 0.022258 0.863656 0.050212 0.063874 0.055297 0.769852 0.144532 0.030319 MOTIF Forebrain_E14.5_H3K9ac_86_80_0.502_1.182758e-07 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.082547 0.595778 0.075637 0.246038 0.041963 0.580304 0.213877 0.163856 0.012917 0.911186 0.035178 0.040719 0.049159 0.781449 0.027803 0.14159 0.05223 0.021829 0.01828 0.907661 0.024708 0.832173 0.03317 0.109949 0.057611 0.801374 0.036736 0.104279 0.025307 0.813937 0.109342 0.051413 0.05146 0.038555 0.080489 0.829496 0.011349 0.769713 0.085858 0.13308 MOTIF Neural-Tube_E14.5_H3K9ac_90_71_0.510_2.099709e-13 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.03505 0.053738 0.784698 0.126513 0.011734 0.828626 0.008554 0.151086 0.090381 0.662376 0.083117 0.164127 0.020393 0.730103 0.062447 0.187057 0.061183 0.87948 0.021244 0.038092 0.139231 0.033641 0.027915 0.799213 0.003937 0.860947 0.036624 0.098492 0.037373 0.891495 0.035681 0.035451 0.003772 0.805407 0.110773 0.080048