MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Forebrain_E16.5_H3K9me3_71_49_0.510_7.177686e-07 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.0 0.504127 0.479722 0.016151 0.270577 0.106684 0.173943 0.448796 0.036579 0.845681 0.020402 0.097338 0.026545 0.031818 0.087527 0.854109 0.005713 0.877915 0.044039 0.072333 0.725419 0.041079 0.120893 0.112609 0.030102 0.022203 0.907389 0.040306 0.03235 0.798672 0.144696 0.024282 0.031503 0.1639 0.010252 0.794344 0.230597 0.025567 0.067215 0.676622 0.002525 0.98973 0.006008 0.001738 MOTIF Intestine_E15.5_H3K9me3_57_149_0.507_0.0008931424 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.55706 0.009056 0.094025 0.33986 0.822925 0.0 0.066532 0.110542 0.00468 0.034802 0.944902 0.015616 0.041938 0.751461 0.14203 0.06457 0.0 0.195006 0.0 0.804994 0.177138 0.0111 0.774621 0.037141 0.762915 0.035252 0.0 0.201833 0.017845 0.011197 0.970958 0.0 0.856247 0.033725 0.068512 0.041516 MOTIF Intestine_P0_H3K9me3_6_166_0.547_1.489434e-35 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.088 0.785 0.001 0.126 0.02 0.001 0.001 0.978 0.001 0.756 0.188 0.055 0.001 0.001 0.001 0.997 0.035 0.489 0.023 0.453 0.799 0.001 0.199 0.001 0.079 0.018 0.902 0.001 0.005 0.903 0.045 0.047 0.077 0.014 0.001 0.908 0.403 0.281 0.061 0.255 0.055 0.623 0.001 0.321 0.001 0.041 0.001 0.957 MOTIF Heart_E13.5_H3K9me3_10_168_0.548_1.772099e-165 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.934 0.013 0.052 0.008 0.01 0.001 0.981 0.003 0.961 0.005 0.031 0.001 0.016 0.001 0.982 0.001 0.909 0.001 0.089 0.997 0.001 0.001 0.001 0.011 0.001 0.987 0.001 0.001 0.95 0.004 0.045 0.006 0.001 0.001 0.992 0.444 0.139 0.001 0.416 0.001 0.982 0.001 0.016 0.013 0.014 0.001 0.972 MOTIF Liver_P0_H3K9me3_33_173_0.527_5.508315e-34 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.033 0.851 0.058 0.058 0.035 0.071 0.007 0.887 0.036 0.852 0.004 0.108 0.062 0.051 0.008 0.879 0.029 0.765 0.041 0.165 0.934 0.007 0.034 0.025 0.06 0.042 0.856 0.042 0.05 0.838 0.045 0.067 0.058 0.045 0.03 0.867 0.637 0.141 0.114 0.108 0.056 0.807 0.049 0.088 0.029 0.094 0.047 0.83 MOTIF Hindbrain_P0_H3K9me3_82_127_0.513_0.0003274475 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.051259 0.032118 0.66537 0.251253 0.954997 0.004916 0.011708 0.028378 0.044095 0.023221 0.876806 0.055878 0.154341 0.721006 0.086832 0.037821 0.059604 0.009575 0.027118 0.903703 0.012277 0.015588 0.892994 0.079141 0.822348 0.033793 0.081014 0.062845 0.175362 0.092451 0.707483 0.024704 0.734199 0.021139 0.043456 0.201207 0.104759 0.040826 0.772242 0.082174 0.418922 0.216908 0.251838 0.112332 MOTIF Limb_E12.5_H3K9me3_77_93_0.521_1.684541e-62 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.836573 0.07178 0.07076 0.020887 0.037903 0.034723 0.814295 0.113079 0.00056 0.798723 0.152921 0.047795 0.10733 0.053126 0.008069 0.831476 0.090981 0.092684 0.804746 0.011589 0.923255 0.017194 0.030103 0.029449 0.088732 0.16396 0.746261 0.001046 0.849574 0.064763 0.036019 0.049645 0.030562 0.119252 0.841835 0.008351 0.500441 0.162819 0.0843 0.252439 0.595382 0.016396 0.331768 0.056454 0.070874 0.002108 0.123657 0.803361 MOTIF Midbrain_E16.5_H3K9me3_20_117_0.527_3.570699e-17 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.859564 0.004443 0.056551 0.079442 0.081238 0.039439 0.842647 0.036676 0.01227 0.935959 0.023185 0.028585 0.102332 0.021898 0.033394 0.842376 0.079347 0.019532 0.884872 0.016249 0.677998 0.001193 0.023643 0.297166 0.354075 0.064039 0.578641 0.003245 0.854139 0.001939 0.122801 0.021121 0.003129 0.028118 0.910546 0.058206 0.820325 0.068984 0.027858 0.082832 MOTIF Hindbrain_E14.5_H3K9me3_39_87_0.522_1.087614e-20 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.859226 0.040768 0.030575 0.06943 0.06564 0.020319 0.726512 0.187529 0.005084 0.79999 0.136482 0.058444 0.046087 0.075035 0.0 0.878879 0.151367 0.041659 0.788555 0.018419 0.73859 0.004398 0.040492 0.21652 0.032294 0.004522 0.958857 0.004327 0.988015 0.007967 0.004018 0.0 0.001179 0.007347 0.970695 0.020779 0.269652 0.256818 0.0 0.47353 MOTIF Liver_E13.5_H3K9me3_64_59_0.507_1.608171e-21 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.820003 0.080597 0.083891 0.01551 0.011563 0.036522 0.822441 0.129475 0.018087 0.807357 0.158385 0.01617 0.126396 0.078702 0.015684 0.779217 0.023937 0.118539 0.845858 0.011667 0.778327 0.022252 0.03762 0.1618 0.016879 0.014325 0.960258 0.008538 0.779034 0.116859 0.075494 0.028613 0.038408 0.083098 0.848266 0.030228 0.100515 0.232365 0.170041 0.49708 0.273117 0.32622 0.189879 0.210783 0.044732 0.542746 0.026456 0.386066 MOTIF Heart_E14.5_H3K9me3_63_68_0.521_3.67664e-52 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.003683 0.240009 0.753008 0.0033 0.658506 0.075888 0.101404 0.164203 0.885075 0.006692 0.093808 0.014426 0.026084 0.012508 0.932219 0.029188 0.002562 0.942462 0.025536 0.029441 0.198066 0.054679 0.002125 0.745131 0.093504 0.058287 0.845682 0.002527 0.920893 0.046613 0.011405 0.02109 0.075213 0.135697 0.783382 0.005709 0.779541 0.118831 0.034003 0.067625 0.055298 0.016786 0.903414 0.024502 MOTIF Hindbrain_E12.5_H3K9me3_30_77_0.529_1.67696e-52 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.845629 0.0649 0.057547 0.031924 0.058845 0.02086 0.796171 0.124124 0.012582 0.780705 0.122372 0.084341 0.0389 0.038053 0.006898 0.916149 0.089776 0.052643 0.843932 0.013649 0.676583 0.001455 0.02153 0.300432 0.11823 0.160701 0.699976 0.021092 0.896007 0.004467 0.038771 0.060756 0.033004 0.003711 0.960662 0.002624 0.26132 0.423578 0.098204 0.216898 MOTIF Midbrain_E14.5_H3K9me3_72_73_0.512_6.653975e-11 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.076496 0.420543 0.198476 0.304486 0.842467 0.047159 0.042183 0.068191 0.062353 0.072831 0.774064 0.090752 0.014114 0.80999 0.1453 0.030595 0.042469 0.011052 0.001343 0.945135 0.066421 0.018307 0.893101 0.022171 0.721299 0.022662 0.096753 0.159286 0.145932 0.044667 0.802727 0.006673 0.813045 0.006888 0.018867 0.161199 0.008445 0.013476 0.966084 0.011995 0.23786 0.340895 0.116404 0.30484 MOTIF Neural-Tube_E13.5_H3K9me3_50_102_0.526_1.123854e-19 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.812404 0.093115 0.06256 0.03192 0.053017 0.062624 0.722047 0.162312 0.008666 0.939764 0.014325 0.037245 0.094611 0.040075 0.00363 0.861684 0.086425 0.10982 0.788277 0.015477 0.783571 0.011365 0.025462 0.179602 0.167462 0.195623 0.619596 0.017318 0.901381 0.002766 0.031369 0.064483 0.019904 0.086682 0.882079 0.011336 0.457339 0.408203 0.108149 0.026309 MOTIF Forebrain_E14.5_H3K9me3_47_106_0.516_1.069189e-08 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.934643 0.000309 0.008706 0.056343 0.021011 0.025314 0.765709 0.187965 0.001481 0.793915 0.148369 0.056235 0.061747 0.059194 0.001311 0.877748 0.139635 0.040543 0.799014 0.020808 0.937329 0.034778 0.0 0.027893 0.2425 0.037019 0.718145 0.002335 0.922955 0.003313 0.043703 0.030029 0.09071 0.027647 0.862875 0.018768 0.300098 0.13714 0.246696 0.316067 MOTIF Cranio-Facial_E15.5_H3K9me3_65_144_0.512_1.843783e-08 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.930252 0.003265 0.001334 0.065149 0.036523 0.0246 0.911292 0.027585 0.0 0.801389 0.156 0.042611 0.059084 0.11083 0.002129 0.827957 0.20716 0.07441 0.686477 0.031952 0.923471 0.012343 0.030562 0.033624 0.10783 0.232718 0.652476 0.006976 0.872211 0.012699 0.036825 0.078265 0.013695 0.018167 0.959695 0.008443 MOTIF Heart_E15.5_H3K9me3_101_101_0.504_2.376432e-08 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.899132 0.018224 0.004701 0.077943 0.046311 0.045192 0.865967 0.042531 0.009126 0.76799 0.222884 0.0 0.003879 0.09861 0.047113 0.850398 0.030527 0.097376 0.846941 0.025156 0.911963 0.027483 0.038636 0.021918 0.103149 0.054923 0.838259 0.003669 0.77917 0.008129 0.016905 0.195796 0.0 0.016471 0.941039 0.04249 0.158024 0.065838 0.276568 0.49957 MOTIF Hindbrain_E13.5_H3K9me3_52_69_0.523_3.509534e-29 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.423542 0.00732 0.567757 0.001381 0.355456 0.106552 0.378925 0.159067 0.826236 0.074386 0.07859 0.020788 0.091032 0.044072 0.734333 0.130563 0.015729 0.905973 0.021548 0.05675 0.122223 0.091877 0.008354 0.777547 0.078478 0.176169 0.731292 0.014061 0.820626 0.005945 0.006075 0.167353 0.104271 0.026931 0.847138 0.02166 0.948012 0.003965 0.041794 0.006229 0.005013 0.021793 0.964698 0.008496 MOTIF Kidney_E14.5_H3K9me3_61_104_0.515_8.185157e-11 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.876854 0.012351 0.098401 0.012394 0.028197 0.045996 0.858156 0.067651 0.037249 0.895252 0.045762 0.021737 0.249671 0.042581 0.045567 0.66218 0.103198 0.096306 0.774517 0.025979 0.884612 0.037192 0.026693 0.051503 0.041408 0.028303 0.929145 0.001144 0.661754 0.027366 0.156973 0.153907 0.02817 0.081237 0.864114 0.026479 MOTIF Limb_E14.5_H3K9me3_62_145_0.515_1.517252e-07 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.890852 0.022654 0.059726 0.026767 0.017736 0.113382 0.783414 0.085469 0.025567 0.855162 0.03593 0.083341 0.049998 0.018469 0.045241 0.886292 0.168622 0.061634 0.764869 0.004875 0.767886 0.056053 0.025091 0.150971 0.087144 0.040432 0.869065 0.00336 0.644889 0.118746 0.01755 0.218815 0.03428 0.033074 0.874716 0.05793 MOTIF Heart_E11.5_H3K9me3_68_97_0.515_4.825531e-08 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.863074 0.083572 0.036652 0.016702 0.006583 0.019742 0.741002 0.232673 0.026803 0.833857 0.053447 0.085892 0.192561 0.050516 0.04248 0.714444 0.084239 0.075348 0.82566 0.014753 0.807311 0.012219 0.020137 0.160333 0.060508 0.100739 0.821722 0.017031 0.882398 0.027082 0.072165 0.018355 0.020519 0.037195 0.932573 0.009713 0.273746 0.186413 0.502293 0.037548 MOTIF Cranio-Facial_E12.5_H3K9me3_80_84_0.510_1.086275e-20 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.575893 0.101015 0.298108 0.024984 0.192536 0.576876 0.168246 0.062342 0.842831 0.082434 0.023802 0.050932 0.039172 0.031391 0.803088 0.126349 0.025474 0.763486 0.178002 0.033038 0.123163 0.063831 0.031179 0.781828 0.074557 0.099674 0.817289 0.00848 0.832276 0.077635 0.023357 0.066732 0.090216 0.096626 0.791156 0.022002 0.86917 0.022924 0.044048 0.063858 0.007033 0.093278 0.897309 0.00238 MOTIF Forebrain_E13.5_H3K9me3_32_61_0.529_2.098897e-63 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.098971 0.431911 0.367101 0.102017 0.890571 0.03028 0.051393 0.027756 0.05929 0.080865 0.755461 0.104384 0.0113 0.738904 0.193911 0.055885 0.086574 0.040437 0.002676 0.870313 0.099919 0.032343 0.860145 0.007593 0.819932 0.00147 0.013322 0.165276 0.198729 0.026394 0.758062 0.016815 0.921978 0.002844 0.0614 0.013777 0.002267 0.14784 0.843882 0.006011 MOTIF Heart_E12.5_H3K9me3_64_106_0.529_6.318133e-315 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.138865 0.388845 0.385657 0.086633 0.828685 0.068575 0.058264 0.044477 0.092792 0.034284 0.793751 0.079173 0.009494 0.744696 0.17919 0.06662 0.088097 0.039556 0.005043 0.867304 0.059803 0.175175 0.763088 0.001933 0.835031 0.003357 0.016151 0.145461 0.136376 0.021584 0.813201 0.028838 0.866634 0.038096 0.067087 0.028183 0.0061 0.078327 0.909523 0.00605 MOTIF Midbrain_E13.5_H3K9me3_63_119_0.521_6.034894e-15 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.810949 0.064443 0.068703 0.055905 0.044027 0.054176 0.754521 0.147276 0.015058 0.82984 0.104 0.051102 0.158652 0.036379 0.018646 0.786323 0.063502 0.105666 0.809899 0.020933 0.835662 0.011043 0.026178 0.127117 0.059126 0.100163 0.810522 0.030189 0.860417 0.008323 0.036085 0.095175 0.009702 0.156554 0.811486 0.022257 MOTIF Limb_E13.5_H3K9me3_78_91_0.520_6.020495e-47 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.847453 0.058858 0.077083 0.016605 0.098554 0.021318 0.759758 0.120371 0.005125 0.844732 0.105238 0.044904 0.13717 0.043481 0.001774 0.817576 0.080603 0.222917 0.684428 0.012052 0.933407 0.011277 0.011236 0.04408 0.111419 0.112479 0.764875 0.011227 0.919522 0.004848 0.025484 0.050145 0.030495 0.056772 0.901762 0.010972 0.156335 0.176547 0.395659 0.27146 MOTIF Neural-Tube_E12.5_H3K9me3_76_88_0.516_9.588561e-47 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.852114 0.056901 0.076087 0.014898 0.049421 0.038661 0.758119 0.153799 0.010402 0.76443 0.171166 0.054002 0.104444 0.053287 0.005685 0.836583 0.073318 0.167346 0.746189 0.013148 0.82251 0.001944 0.026505 0.149041 0.091504 0.012384 0.885467 0.010645 0.937201 0.007274 0.046977 0.008549 0.032201 0.071714 0.891213 0.004872 0.136397 0.082357 0.356188 0.425057 MOTIF Heart_E16.5_H3K9me3_39_87_0.537_4.471803e-47 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.452702 0.293242 0.10094 0.153116 0.913315 0.052774 0.019684 0.014227 0.116457 0.011195 0.761828 0.11052 0.005463 0.931839 0.022173 0.040525 0.130738 0.055345 0.020483 0.793434 0.104999 0.053208 0.828212 0.013581 0.878685 0.013431 0.011888 0.095996 0.022094 0.098206 0.876659 0.003041 0.77695 0.06026 0.048069 0.114722 0.033282 0.044878 0.877548 0.044292 0.240606 0.166574 0.128186 0.464635 MOTIF Cranio-Facial_E14.5_H3K9me3_55_86_0.520_5.321405e-25 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.93209 0.024819 0.037918 0.005173 0.094906 0.018579 0.758145 0.12837 0.005448 0.919044 0.004036 0.071471 0.33538 0.048091 0.009479 0.60705 0.072109 0.156001 0.747221 0.024669 0.804109 0.011379 0.007481 0.177031 0.042914 0.011703 0.924292 0.02109 0.943376 0.016712 0.007965 0.031947 0.034825 0.053761 0.895554 0.015861 0.30662 0.089666 0.218354 0.38536 MOTIF Intestine_E16.5_H3K9me3_56_99_0.528_2.12789e-18 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.874062 0.02036 0.103434 0.002144 0.056807 0.020302 0.904263 0.018628 0.034886 0.847305 0.019474 0.098334 0.269744 0.059614 0.011226 0.659417 0.151685 0.185503 0.650135 0.012676 0.777652 0.051806 0.017867 0.152675 0.027557 0.053255 0.911769 0.007419 0.844191 0.081853 0.026064 0.047892 0.03428 0.033683 0.921338 0.010699 0.421891 0.234172 0.092243 0.251694 MOTIF Kidney_E16.5_H3K9me3_78_132_0.515_7.437802e-34 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.861595 0.044252 0.089282 0.004871 0.040787 0.030387 0.839298 0.089528 0.016115 0.884909 0.031438 0.067538 0.318217 0.031826 0.006902 0.643055 0.13605 0.108885 0.749673 0.005392 0.898235 0.00711 0.042676 0.05198 0.055815 0.050439 0.891253 0.002493 0.788937 0.103971 0.027533 0.079559 0.067355 0.031982 0.877667 0.022996 MOTIF Stomach_E14.5_H3K9me3_53_107_0.515_8.661622e-13 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.255587 0.448676 0.213337 0.082399 0.77436 0.061024 0.133889 0.030727 0.034018 0.011254 0.757534 0.197194 0.004173 0.942763 0.022727 0.030336 0.38858 0.005021 0.045183 0.561216 0.103346 0.03945 0.84987 0.007334 0.873964 0.080005 0.018786 0.027245 0.04204 0.031588 0.910285 0.016087 0.842693 0.048007 0.093794 0.015505 0.015837 0.064548 0.904652 0.014963 MOTIF Stomach_E16.5_H3K9me3_56_88_0.521_1.21858e-16 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.928851 0.014988 0.050171 0.00599 0.034656 0.011972 0.822013 0.131359 0.005569 0.941315 0.010662 0.042454 0.454513 0.07968 0.034954 0.430853 0.127061 0.037845 0.822908 0.012186 0.947714 0.022164 0.012965 0.017157 0.039146 0.013415 0.946182 0.001256 0.94815 0.022741 0.01975 0.009359 0.026084 0.067067 0.895188 0.011661