MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Hindbrain_E15.5_H3K9me3_89_122_0.514_5.223846e-11 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.698973 0.003481 0.005111 0.292435 0.042368 0.032521 0.707496 0.217615 0.100568 0.056095 0.027043 0.816295 0.136851 0.812995 0.002684 0.04747 0.068586 0.901966 0.002188 0.02726 0.016683 0.0 0.001962 0.981356 0.030347 0.800198 0.093431 0.076024 0.050949 0.007066 0.000307 0.941677 0.120237 0.009321 0.834194 0.036248 MOTIF Heart_E13.5_H3K9me3_112_113_0.515_4.126488e-21 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.105834 0.840019 0.054147 0.0 0.008416 0.888086 0.042899 0.060599 0.941485 0.007868 0.011912 0.038734 0.018688 0.252135 0.679138 0.050039 0.96429 0.003074 0.024316 0.00832 0.006389 0.003464 0.884342 0.105805 0.10245 0.13176 0.758662 0.007128 0.575309 0.295983 0.006327 0.122381 0.245525 0.711863 0.02096 0.021652 MOTIF Hindbrain_E12.5_H3K9me3_84_96_0.516_1.006069e-17 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.071523 0.8636 0.039857 0.025019 0.008381 0.890317 0.040272 0.06103 0.874361 0.006813 0.015046 0.10378 0.0 0.329222 0.652298 0.01848 0.927874 0.005392 0.066734 0.0 0.143959 0.00032 0.772045 0.083676 0.017407 0.188012 0.696635 0.097946 0.771624 0.036024 0.018326 0.174026 0.12473 0.740156 0.034718 0.100395 MOTIF Limb_E12.5_H3K9me3_64_92_0.524_2.027596e-37 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.089738 0.6461 0.134731 0.129431 0.006035 0.893143 0.061042 0.03978 0.931223 0.021278 0.010023 0.037476 0.050879 0.136904 0.753634 0.058583 0.935005 0.012774 0.042896 0.009325 0.053846 0.001973 0.902492 0.041688 0.085788 0.089987 0.78202 0.042205 0.6681 0.183487 0.028561 0.119852 0.089261 0.732322 0.045232 0.133185 MOTIF Hindbrain_E16.5_H3K9me3_58_141_0.520_6.500761e-21 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.129768 0.11452 0.755712 0.0 0.0 0.0 0.319403 0.680597 0.0 0.782256 0.026032 0.191712 0.00869 0.951812 0.0 0.039498 0.059888 0.0 0.009949 0.930163 0.084364 0.820048 0.095588 0.0 0.368599 0.0 0.007375 0.624026 0.0 0.04308 0.95692 0.0 0.839836 0.028092 0.013262 0.11881 MOTIF Kidney_E15.5_H3K9me3_29_180_0.522_2.890128e-17 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.001 0.866 0.132 0.001 0.001 0.526 0.001 0.472 MOTIF Neural-Tube_E14.5_H3K9me3_67_90_0.509_0.0009516851 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.7661 0.180103 0.035986 0.017811 0.106921 0.040038 0.77432 0.078721 0.946894 0.003145 0.021757 0.028204 0.054407 0.022297 0.893601 0.029695 0.0 0.067316 0.922742 0.009942 0.984691 0.002797 0.010469 0.002044 0.007226 0.742816 0.104865 0.145092 0.031717 0.870079 0.063669 0.034536 0.04518 0.127835 0.134133 0.692852 0.155916 0.332758 0.473822 0.037504 MOTIF Hindbrain_E12.5_H3K9me3_62_34_0.521_6.174887e-37 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.007624 0.900062 0.023803 0.06851 0.850237 0.008181 0.042306 0.099276 0.033668 0.087703 0.86299 0.015638 0.948275 0.004345 0.041516 0.005863 0.157421 0.006406 0.821441 0.014731 0.033666 0.045735 0.886167 0.034432 0.890412 0.059554 0.013325 0.036709 0.062661 0.711158 0.003097 0.223084 0.224377 0.524232 0.006847 0.244544 0.059244 0.405628 0.377591 0.157536 MOTIF Hindbrain_E13.5_H3K9me3_77_82_0.518_6.308023e-19 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.009001 0.89191 0.044089 0.055 0.768892 0.020252 0.003482 0.207374 0.039778 0.047686 0.854113 0.058423 0.935046 0.021403 0.039524 0.004027 0.240432 0.011837 0.740481 0.00725 0.095511 0.0276 0.805581 0.071308 0.901493 0.047131 0.022136 0.02924 0.034427 0.844529 0.005738 0.115306 0.165048 0.753846 0.003155 0.07795 0.137697 0.230967 0.282755 0.34858 0.968146 0.0 0.025767 0.006087 MOTIF Heart_E13.5_H3K9me3_98_68_0.517_2.056706e-28 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.00542 0.892958 0.021399 0.080223 0.845351 0.018351 0.025846 0.110452 0.033603 0.052871 0.88153 0.031996 0.931042 0.016111 0.026385 0.026463 0.070575 0.009245 0.897441 0.022739 0.081359 0.046428 0.844985 0.027228 0.726433 0.160351 0.023016 0.0902 0.131359 0.739608 0.013748 0.115285 0.290708 0.650646 0.009734 0.048912 0.103912 0.43365 0.081444 0.380993 0.0 0.55789 0.242026 0.200084 MOTIF Heart_E15.5_H3K9me3_46_86_0.520_8.604662e-11 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.895956 0.055609 0.022726 0.025708 0.017262 0.174092 0.762788 0.045858 0.853834 0.037828 0.071692 0.036646 0.009736 0.029669 0.806634 0.15396 0.02131 0.033248 0.931656 0.013786 0.782359 0.019506 0.043351 0.154785 0.01594 0.760578 0.079352 0.14413 0.015623 0.818482 0.014787 0.151107 0.040777 0.092219 0.093427 0.773578 0.145146 0.023173 0.361335 0.470347 MOTIF Liver_E13.5_H3K9me3_37_113_0.515_6.73944e-19 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.872983 0.065809 0.013909 0.047299 0.0 0.048985 0.947118 0.003897 0.874372 0.015003 0.099012 0.011613 0.074649 0.019226 0.84204 0.064084 0.089271 0.030918 0.867018 0.012793 0.857153 0.055037 0.065153 0.022657 0.039334 0.723633 0.000446 0.236588 0.043234 0.711979 0.003957 0.24083 0.062553 0.289292 0.096254 0.551902 MOTIF Hindbrain_E16.5_H3K9me3_53_7_0.522_1.002013e-14 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.014283 0.889439 0.023045 0.073233 0.756723 0.061422 0.061417 0.120438 0.033938 0.096843 0.823846 0.045373 0.942894 0.008012 0.028695 0.020398 0.164213 0.005484 0.82537 0.004934 0.052858 0.025443 0.886577 0.035122 0.837344 0.130226 0.01705 0.01538 0.039445 0.807821 0.014888 0.137846 0.20694 0.746131 0.00918 0.03775 0.219855 0.189538 0.080079 0.510528 0.064771 0.013837 0.884391 0.037001 0.057691 0.338316 0.590568 0.013425 MOTIF Heart_E14.5_H3K9me3_30_10_0.533_1.440738e-66 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.006385 0.940224 0.026925 0.026466 0.902517 0.015255 0.014051 0.068176 0.034017 0.036563 0.919907 0.009514 0.903288 0.002714 0.070805 0.023193 0.023318 0.004561 0.962672 0.009449 0.214736 0.030244 0.72448 0.03054 0.764693 0.122709 0.027644 0.084955 0.035396 0.77739 0.021665 0.165549 0.154085 0.734796 0.023944 0.087175 0.086313 0.198727 0.029719 0.685241 0.218091 0.001679 0.774845 0.005385 0.036791 0.002165 0.908734 0.052311 MOTIF Limb_E14.5_H3K9me3_29_12_0.527_2.985585e-20 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.002947 0.90619 0.066896 0.023967 0.832097 0.029996 0.018245 0.119662 0.026124 0.045788 0.893315 0.034773 0.887504 0.019254 0.069973 0.023269 0.092158 0.025849 0.863754 0.018239 0.184036 0.036364 0.703402 0.076198 0.805056 0.113689 0.018099 0.063157 0.095565 0.746258 0.018674 0.139504 0.085983 0.857355 0.017125 0.039537 0.283792 0.196058 0.024332 0.495818 0.145745 0.021324 0.78961 0.04332 MOTIF Liver_E12.5_H3K9me3_13_42_0.530_9.770246e-35 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.01176 0.910748 0.01366 0.063831 0.82443 0.015913 0.039982 0.119676 0.006243 0.04933 0.926928 0.017498 0.914786 0.007847 0.066486 0.010881 0.030228 0.008507 0.94984 0.011425 0.163915 0.068561 0.741955 0.025568 0.761148 0.112047 0.02777 0.099036 0.065564 0.739955 0.037284 0.157198 0.040632 0.782461 0.026417 0.15049 0.220587 0.240301 0.046657 0.492455 0.239038 0.006781 0.577771 0.17641 MOTIF Forebrain_E11.5_H3K9me3_16_12_0.530_1.564333e-13 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.006731 0.888872 0.047935 0.056462 0.876785 0.046802 0.026502 0.049911 0.028725 0.054821 0.842957 0.073497 0.912356 0.004198 0.064333 0.019113 0.041546 0.006052 0.941801 0.0106 0.207796 0.02834 0.751111 0.012754 0.772513 0.156747 0.021901 0.048838 0.011923 0.768152 0.028468 0.191457 0.054547 0.790149 0.017268 0.138036 0.02178 0.095778 0.062789 0.819653 MOTIF Forebrain_E16.5_H3K9me3_24_23_0.530_2.881296e-17 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.016148 0.924839 0.013965 0.045047 0.85686 0.043433 0.016747 0.082961 0.063532 0.036625 0.878272 0.021571 0.862165 0.012099 0.079601 0.046135 0.093272 0.003552 0.864892 0.038283 0.20764 0.020978 0.70704 0.064341 0.824926 0.075753 0.02116 0.078162 0.03071 0.762276 0.051211 0.155802 0.057679 0.884406 0.008955 0.048961 0.083637 0.168499 0.02746 0.720403 MOTIF Heart_P0_H3K9me3_65_18_0.520_6.886686e-16 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.009325 0.926269 0.023288 0.041118 0.856081 0.016329 0.021885 0.105705 0.065965 0.052523 0.868824 0.012687 0.873243 0.007983 0.050076 0.068697 0.063034 0.008115 0.915374 0.013477 0.074898 0.040818 0.868586 0.015698 0.789229 0.13178 0.024415 0.054576 0.101037 0.614233 0.043105 0.241625 0.061753 0.724243 0.001933 0.212072 0.034419 0.125841 0.068785 0.770954 0.0 0.000303 0.562206 0.437491 MOTIF Lung_E15.5_H3K9me3_31_82_0.518_1.991609e-05 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.043553 0.898801 0.030048 0.027598 0.788839 0.081491 0.020918 0.108752 0.057121 0.171263 0.713297 0.058319 0.841933 0.071848 0.043792 0.042427 0.040034 0.014306 0.932593 0.013067 0.170668 0.021473 0.785432 0.022428 0.851322 0.10085 0.017682 0.030145 0.040591 0.737019 0.030971 0.191419 0.117007 0.860824 0.009976 0.012193 0.217302 0.130661 0.049241 0.602796 MOTIF Hindbrain_P0_H3K9me3_80_80_0.513_6.448093e-07 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.005424 0.938027 0.025987 0.030563 0.88028 0.009278 0.011227 0.099215 0.029055 0.073374 0.832354 0.065217 0.903806 0.007279 0.016928 0.071987 0.067488 0.014625 0.902036 0.015851 0.076258 0.02206 0.890784 0.010899 0.918557 0.028251 0.048877 0.004315 0.059836 0.521136 0.271657 0.147371 0.199067 0.507741 0.030267 0.262925 0.092225 0.138741 0.382638 0.386397 MOTIF Hindbrain_E14.5_H3K9me3_68_37_0.517_1.082044e-14 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.005669 0.960577 0.003953 0.0298 0.957585 0.002221 0.012818 0.027376 0.005768 0.056628 0.928251 0.009353 0.936472 0.023489 0.012834 0.027205 0.207097 0.000877 0.771964 0.020061 0.050465 0.056858 0.808665 0.084012 0.829282 0.067776 0.039601 0.063341 0.02309 0.672883 0.10803 0.195997 0.12378 0.613576 0.007401 0.255242 0.0 0.158179 0.250342 0.591478 MOTIF Neural-Tube_E13.5_H3K9me3_82_53_0.518_1.129181e-17 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.003753 0.943193 0.005996 0.047057 0.907147 0.005079 0.013334 0.07444 0.012484 0.145867 0.799874 0.041776 0.940039 0.01081 0.024878 0.024274 0.143985 0.002805 0.825406 0.027805 0.048109 0.088004 0.793944 0.069943 0.773185 0.05765 0.037979 0.131186 0.07697 0.646125 0.074845 0.20206 0.057375 0.738675 0.030641 0.173309 0.009018 0.142894 0.203726 0.644363 MOTIF Forebrain_E13.5_H3K9me3_14_26_0.535_2.856432e-33 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.008258 0.873133 0.048427 0.070181 0.78315 0.008498 0.083527 0.124825 0.03879 0.070224 0.86259 0.028396 0.948733 0.002044 0.044333 0.004889 0.047994 0.005551 0.919115 0.027341 0.037399 0.021841 0.912595 0.028165 0.728813 0.079289 0.031183 0.160714 0.113708 0.766783 0.014833 0.104676 0.068304 0.698958 0.004994 0.227744 0.344186 0.151621 0.102901 0.401292 0.11158 0.000204 0.391748 0.496468 MOTIF Cranio-Facial_E15.5_H3K9me3_60_97_0.513_6.20618e-11 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.030386 0.900969 0.015284 0.053361 0.738497 0.055375 0.094231 0.111898 0.020937 0.088541 0.775423 0.115099 0.893626 0.019078 0.041363 0.045934 0.030199 0.032805 0.931177 0.005819 0.048561 0.046317 0.891949 0.013173 0.823892 0.081321 0.006239 0.088548 0.047587 0.756874 0.010878 0.184661 0.026509 0.783664 0.039085 0.150742 MOTIF Heart_E11.5_H3K9me3_30_30_0.529_1.454592e-27 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.007816 0.913948 0.030131 0.048104 0.814685 0.010157 0.041387 0.133771 0.030864 0.06852 0.862288 0.038328 0.897829 0.001906 0.073425 0.026841 0.020554 0.003817 0.947262 0.028367 0.20275 0.047282 0.734343 0.015624 0.830151 0.07994 0.033758 0.05615 0.112898 0.655509 0.018342 0.213251 0.049866 0.815821 0.008102 0.126211 MOTIF Limb_E12.5_H3K9me3_28_74_0.534_1.2069e-73 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.006671 0.925838 0.016796 0.050695 0.846316 0.00837 0.065272 0.080041 0.027582 0.067711 0.883458 0.021249 0.936633 0.003876 0.056018 0.003472 0.034346 0.01431 0.936153 0.015191 0.17103 0.037225 0.773159 0.018586 0.708586 0.096864 0.00767 0.18688 0.103337 0.705589 0.030366 0.160708 0.053649 0.798839 0.002258 0.145254 MOTIF Midbrain_E13.5_H3K9me3_20_32_0.533_1.934338e-26 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.007665 0.928779 0.008153 0.055403 0.772489 0.008374 0.081215 0.137922 0.009244 0.077595 0.872893 0.040269 0.952987 0.003508 0.031762 0.011742 0.130417 0.002669 0.858586 0.008328 0.045515 0.025061 0.857035 0.072389 0.812266 0.063732 0.029687 0.094316 0.061957 0.703573 0.013609 0.22086 0.03755 0.721794 0.003229 0.237427 0.33408 0.148729 0.337006 0.180185 MOTIF Neural-Tube_E12.5_H3K9me3_33_84_0.529_2.298468e-29 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.005089 0.946484 0.009687 0.03874 0.825266 0.011846 0.059388 0.1035 0.00842 0.05062 0.910079 0.030881 0.939006 0.007537 0.049833 0.003625 0.152592 0.004139 0.825546 0.017723 0.101564 0.034423 0.827633 0.036381 0.755152 0.181808 0.014613 0.048427 0.066381 0.709791 0.020837 0.202991 0.101659 0.73598 0.003898 0.158463 MOTIF Forebrain_E14.5_H3K9me3_34_18_0.520_4.697329e-10 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.005131 0.970112 0.005738 0.019019 0.872655 0.010946 0.005495 0.110903 0.033974 0.232362 0.72528 0.008383 0.948221 0.007301 0.024959 0.019519 0.067244 0.030373 0.881578 0.020805 0.07366 0.107078 0.729556 0.089705 0.826599 0.06853 0.026309 0.078562 0.038614 0.754123 0.02876 0.178503 0.040289 0.706024 0.010941 0.242746 0.407344 0.093637 0.246485 0.252535 MOTIF Neural-Tube_E14.5_H3K9me3_30_75_0.521_4.364486e-06 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.018021 0.869266 0.054009 0.058704 0.796542 0.032796 0.014883 0.155779 0.061403 0.228445 0.648591 0.061561 0.915471 0.027608 0.052677 0.004244 0.040008 0.026733 0.851919 0.08134 0.049006 0.106008 0.844413 0.000573 0.914218 0.043526 0.037825 0.004432 0.051419 0.791884 0.042031 0.114666 0.068342 0.717957 0.026153 0.187548 MOTIF Forebrain_P0_H3K9me3_72_80_0.517_9.855474e-06 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.937374 0.018936 0.04369 0.9013 0.028611 0.013059 0.05703 0.064156 0.013352 0.900682 0.021811 0.913472 0.007254 0.022739 0.056535 0.039282 0.02501 0.889085 0.046624 0.002129 0.013476 0.837712 0.146682 0.810207 0.120598 0.03846 0.030735 0.020395 0.735935 0.086039 0.157631 0.014891 0.640197 0.003367 0.341546 MOTIF Stomach_P0_H3K9me3_17_73_0.530_0.0006695534 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.013597 0.92854 0.034426 0.023436 0.824727 0.057253 0.061747 0.056273 0.10873 0.042859 0.829314 0.019097 0.735046 0.014479 0.0837 0.166775 0.020113 0.016058 0.938418 0.025411 0.102707 0.041276 0.801747 0.054271 0.856876 0.109951 0.010586 0.022586 0.035151 0.736501 0.068285 0.160063 0.032091 0.712202 0.019561 0.236146