MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Liver_E13.5_H3K4me2_40_39_0.561_4.636259e-241 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.010935 0.910915 0.0 0.07815 0.005999 0.908634 0.040255 0.045112 0.073387 0.591045 0.326127 0.009441 0.028201 0.059258 0.0296 0.882941 0.0 0.866977 0.12157 0.011453 0.025993 0.917697 0.05631 0.0 0.045161 0.028536 0.825588 0.100715 0.00605 0.964128 0.010273 0.019549 0.033163 0.469763 0.009261 0.487813 MOTIF Midbrain_E13.5_H3K4me2_79_46_0.544_4.042195e-102 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.184747 0.04597 0.746366 0.022917 0.034557 0.783492 0.022535 0.159416 0.062574 0.082632 0.826832 0.027962 0.009933 0.266864 0.718481 0.004722 0.694277 0.027798 0.02266 0.255265 0.004102 0.039398 0.954944 0.001556 0.016408 0.010163 0.945264 0.028165 0.056964 0.023588 0.899384 0.020064 0.828728 0.025082 0.0 0.14619 0.498529 0.107346 0.365985 0.02814 0.128259 0.502654 0.020742 0.348345 MOTIF Cranio-Facial_E14.5_H3K4me2_65_58_0.553_5.63938e-116 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.217362 0.200888 0.564366 0.017384 0.041963 0.894378 0.0 0.063658 0.078105 0.248047 0.659142 0.014706 0.0 0.0354 0.9646 0.0 0.729429 0.034016 0.0 0.236555 0.019043 0.062365 0.873847 0.044745 0.076169 0.022572 0.861473 0.039786 0.080979 0.031153 0.880595 0.007273 0.822198 0.010738 0.040481 0.126583 0.472369 0.488345 0.0 0.039286 MOTIF Forebrain_E12.5_H3K4me2_80_56_0.554_4.78557e-105 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.14621 0.028753 0.80338 0.021657 0.05631 0.761139 0.084375 0.098175 0.067274 0.099591 0.804944 0.028192 0.094227 0.011177 0.891978 0.002618 0.777131 0.023053 0.041239 0.158577 0.10019 0.127513 0.709852 0.062445 0.058236 0.097736 0.810216 0.033812 0.027433 0.051569 0.910441 0.010557 0.798401 0.106467 0.008733 0.086399 0.281991 0.652629 0.051018 0.014363 MOTIF Limb_E11.5_H3K4me2_61_47_0.567_4.55309e-203 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.042035 0.889794 0.017653 0.050518 0.072531 0.653283 0.029765 0.244421 0.033284 0.811826 0.033386 0.121504 0.032489 0.011213 0.022524 0.933774 0.00068 0.951001 0.048319 0.0 0.027769 0.771402 0.04566 0.15517 0.063242 0.068646 0.839317 0.028795 0.003505 0.643441 0.250061 0.102992 0.086699 0.780741 0.101485 0.031075 MOTIF Limb_E13.5_H3K4me2_70_51_0.549_1.254064e-176 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.048304 0.806437 0.017492 0.127767 0.083408 0.789944 0.031988 0.09466 0.030807 0.883079 0.01397 0.072144 0.04067 0.008351 0.022291 0.928688 0.0 0.950765 0.049235 0.0 0.064054 0.627709 0.041422 0.266814 0.034676 0.061884 0.894365 0.009075 0.00259 0.843724 0.070726 0.082959 0.194998 0.566969 0.069661 0.168372 MOTIF Neural-Tube_E11.5_H3K4me2_55_50_0.577_2.964796e-247 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.038638 0.85972 0.007203 0.094439 0.091755 0.760733 0.052207 0.095305 0.0199 0.958536 0.006294 0.015269 0.060202 0.010182 0.037334 0.892282 0.0 0.962229 0.037771 0.0 0.035735 0.717703 0.036226 0.210335 0.049552 0.0 0.942039 0.008409 0.006282 0.597067 0.296771 0.09988 0.061588 0.597077 0.096472 0.244863 MOTIF Kidney_P0_H3K4me2_91_66_0.534_7.735626e-60 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.131719 0.151287 0.716994 0.0 0.053052 0.761752 0.06563 0.119566 0.273823 0.041353 0.681735 0.003089 0.003787 0.297518 0.695257 0.003439 0.910704 0.00753 0.0 0.081766 0.005214 0.0 0.951672 0.043113 0.106505 0.126275 0.732839 0.034381 0.050019 0.047325 0.879665 0.02299 0.865522 0.062586 0.032957 0.038935 MOTIF Hindbrain_E12.5_H3K4me2_75_63_0.549_2.617064e-166 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.012719 0.165547 0.820399 0.001335 0.061672 0.782158 0.056669 0.0995 0.26382 0.028864 0.62876 0.078556 0.048683 0.064767 0.88214 0.004409 0.827767 0.020756 0.044351 0.107126 0.012703 0.007584 0.922834 0.056879 0.247549 0.032018 0.697911 0.022522 0.110605 0.034804 0.837503 0.017088 0.81336 0.065036 0.058598 0.063006 MOTIF Kidney_E16.5_H3K4me2_70_55_0.548_4.451626e-143 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.080796 0.161192 0.755007 0.003005 0.05554 0.804653 0.056544 0.083263 0.197701 0.107642 0.639181 0.055477 0.053447 0.070007 0.874806 0.00174 0.822562 0.02621 0.026019 0.125208 0.008128 0.037446 0.934643 0.019782 0.128951 0.056162 0.744038 0.07085 0.078085 0.022477 0.885064 0.014373 0.827936 0.090091 0.029825 0.052148 MOTIF Neural-Tube_E11.5_H3K4me2_70_74_0.554_7.54225e-161 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.125909 0.198285 0.675806 0.0 0.098237 0.85143 0.01218 0.038153 0.259321 0.029487 0.672627 0.038565 0.0 0.076244 0.923756 0.0 0.76542 0.048825 0.007611 0.178144 0.00661 0.006224 0.912968 0.074198 0.027397 0.030066 0.938802 0.003736 0.185848 0.0 0.81034 0.003812 0.841467 0.104884 0.036025 0.017624 MOTIF Stomach_E15.5_H3K4me2_74_83_0.550_5.992032e-127 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.111176 0.34131 0.547513 0.0 0.042234 0.619261 0.113412 0.225093 0.072299 0.050001 0.864955 0.012745 0.004852 0.063479 0.927966 0.003703 0.916929 0.022925 0.016289 0.043857 0.143979 0.0 0.815054 0.040966 0.06836 0.018171 0.89695 0.016519 0.25078 0.004334 0.743563 0.001322 0.861189 0.0584 0.070122 0.01029 MOTIF Liver_E14.5_H3K27me3_45_57_0.534_5.264052e-32 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.03291 0.928775 0.038315 0.0 0.025837 0.684008 0.050474 0.239682 0.01152 0.881759 0.096753 0.009967 0.06924 0.0 0.027478 0.903281 0.0 0.932078 0.067922 0.0 0.023975 0.647598 0.038906 0.289521 0.067313 0.027797 0.888087 0.016803 0.0 0.808572 0.146983 0.044445 0.053029 0.530791 0.086083 0.330098 MOTIF Cranio-Facial_E13.5_H3K9ac_77_84_0.524_2.659281e-63 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.072746 0.848269 0.0 0.078985 0.26838 0.068476 0.628798 0.034345 0.0 0.325805 0.674195 0.0 0.879209 0.027403 0.046434 0.046953 0.014025 0.008364 0.879591 0.098021 0.036664 0.018479 0.933342 0.011516 0.076564 0.003933 0.898737 0.020766 0.803351 0.052498 0.021494 0.122657 0.288033 0.030896 0.629562 0.051508 MOTIF Midbrain_E15.5_H3K9ac_69_61_0.536_2.651007e-37 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.034198 0.016473 0.933455 0.015874 0.069964 0.714069 0.049536 0.16643 0.214737 0.14967 0.546136 0.089457 0.002178 0.054352 0.932261 0.011209 0.895775 0.029281 0.028922 0.046022 0.029118 0.016185 0.914759 0.039938 0.197709 0.051409 0.725224 0.025658 0.040462 0.030256 0.920366 0.008917 0.769684 0.075145 0.049968 0.105203 0.201539 0.164078 0.496518 0.137865 MOTIF Forebrain_E12.5_H3K9ac_66_57_0.514_2.839539e-19 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.190425 0.0 0.100293 0.709282 0.009147 0.233353 0.753726 0.003774 0.049601 0.68558 0.051558 0.213261 0.067155 0.008805 0.798467 0.125573 0.083981 0.054201 0.851749 0.010069 0.771089 0.038639 0.045265 0.145006 0.037285 0.012737 0.827334 0.122644 0.053226 0.0313 0.890735 0.024739 0.013331 0.036046 0.94203 0.008593 0.736118 0.028023 0.068003 0.167855 0.703713 0.059975 0.22709 0.009222 MOTIF Forebrain_E16.5_H3K9ac_67_43_0.546_2.685768e-99 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.062976 0.209037 0.722265 0.005722 0.08529 0.784712 0.008124 0.121873 0.0634 0.175356 0.690075 0.07117 0.090199 0.054608 0.847395 0.007798 0.815135 0.057414 0.031312 0.096138 0.015067 0.012015 0.931792 0.041127 0.058671 0.017788 0.866008 0.057534 0.039165 0.022544 0.928173 0.010118 0.78293 0.11866 0.054765 0.043644 0.587781 0.105934 0.271297 0.034987 MOTIF Hindbrain_E15.5_H3K9ac_70_70_0.541_5.61571e-45 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.124225 0.026741 0.849034 0.0 0.075647 0.766885 0.114484 0.042985 0.206604 0.023286 0.715373 0.054738 0.174676 0.056075 0.761798 0.007452 0.882898 0.044135 0.035179 0.037788 0.08683 0.028305 0.863443 0.021422 0.30507 0.018399 0.629339 0.047191 0.033682 0.022051 0.929283 0.014984 0.844255 0.063744 0.059172 0.03283 0.631663 0.281012 0.072049 0.015276 0.059511 0.388694 0.541747 0.010048 MOTIF Limb_E14.5_H3K9ac_78_51_0.529_7.671974e-27 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.618399 0.215118 0.084893 0.08159 0.114565 0.160133 0.708926 0.016376 0.076096 0.787655 0.06074 0.075509 0.216008 0.05219 0.684693 0.047109 0.00501 0.048814 0.94375 0.002426 0.889071 0.027448 0.035987 0.047494 0.058784 0.015992 0.889444 0.035779 0.306565 0.029276 0.651188 0.012971 0.044031 0.020438 0.922393 0.013138 0.74547 0.119151 0.069936 0.065443 0.612225 0.104261 0.0 0.283514 MOTIF Kidney_E14.5_H3K9ac_77_51_0.537_1.346548e-39 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.076184 0.134087 0.747121 0.042608 0.047253 0.831239 0.049388 0.072119 0.202517 0.217366 0.53582 0.044297 0.049244 0.0417 0.90495 0.004106 0.702473 0.092418 0.030306 0.174802 0.013472 0.051639 0.88763 0.047258 0.053713 0.017577 0.886002 0.042707 0.03612 0.014208 0.926499 0.023173 0.841067 0.068748 0.039018 0.051167 0.924968 0.03323 0.0 0.041802 MOTIF Midbrain_E14.5_H3K9ac_77_58_0.539_1.265036e-92 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.116595 0.026872 0.838462 0.018071 0.036765 0.887437 0.044214 0.031584 0.270597 0.13699 0.53521 0.057203 0.006073 0.044965 0.947344 0.001617 0.845697 0.029766 0.009921 0.114615 0.018225 0.105551 0.801901 0.074323 0.065667 0.045139 0.765659 0.123535 0.064685 0.030136 0.884429 0.02075 0.776382 0.045103 0.09788 0.080635 MOTIF Hindbrain_E11.5_H3K9ac_62_66_0.553_1.8673e-84 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.145251 0.227707 0.618931 0.008111 0.030093 0.905639 0.018332 0.045936 0.229612 0.149718 0.610662 0.010008 0.0 0.023749 0.976251 0.0 0.924107 0.033468 0.004459 0.037965 0.017515 0.022697 0.892352 0.067436 0.194187 0.025993 0.760172 0.019649 0.055569 0.032102 0.885593 0.026735 0.824784 0.060637 0.099308 0.015271 MOTIF Neural-Tube_E14.5_H3K9ac_71_54_0.546_4.952639e-64 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.462971 0.454166 0.0 0.082863 0.071079 0.289604 0.636674 0.002643 0.052184 0.779364 0.033439 0.135013 0.282278 0.085663 0.608347 0.023712 0.012322 0.064839 0.917833 0.005005 0.843078 0.057063 0.008272 0.091587 0.010323 0.022592 0.927771 0.039314 0.077342 0.048272 0.794075 0.080311 0.048629 0.030241 0.910905 0.010225 0.825555 0.059057 0.033863 0.081525 MOTIF Hindbrain_E12.5_H3K4me3_76_41_0.550_1.108185e-67 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.042887 0.885018 0.031017 0.041078 0.067789 0.821933 0.034213 0.076065 0.007018 0.801572 0.017751 0.173659 0.054512 0.055911 0.022797 0.866779 0.0 0.973893 0.026107 0.0 0.028172 0.741413 0.071255 0.15916 0.054713 0.04913 0.860566 0.03559 0.002491 0.599209 0.320962 0.077338 0.060395 0.716207 0.06609 0.157309 0.172782 0.0 0.0 0.827218 MOTIF Limb_E12.5_H3K4me3_45_26_0.617_1.658738e-314 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.241742 0.389086 0.051778 0.317394 0.036497 0.267435 0.485637 0.210432 0.026626 0.933674 0.005981 0.033719 0.086431 0.52126 0.063498 0.328811 0.074964 0.716763 0.023641 0.184631 0.025 0.047733 0.043575 0.883692 0.000199 0.959027 0.037899 0.002875 0.017989 0.826089 0.036352 0.11957 0.041913 0.057635 0.868517 0.031934 0.012018 0.786491 0.076696 0.124796 0.023161 0.831752 0.111377 0.03371 MOTIF Midbrain_E12.5_H3K4me3_61_25_0.594_3.637995e-181 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.230162 0.114008 0.051297 0.604532 0.038656 0.380508 0.454956 0.12588 0.030452 0.912153 0.020849 0.036546 0.09536 0.588961 0.066435 0.249244 0.007422 0.873906 0.023207 0.095464 0.042315 0.034611 0.048642 0.874432 0.000497 0.951951 0.043005 0.004547 0.02016 0.790645 0.036521 0.152673 0.04642 0.04148 0.873525 0.038575 0.0 0.725232 0.168713 0.106055 0.029741 0.741348 0.084581 0.144331 MOTIF Limb_E15.5_H3K4me3_51_37_0.612_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.037289 0.883429 0.051151 0.028131 0.015199 0.688389 0.058612 0.237801 0.028764 0.860048 0.025847 0.085342 0.050072 0.023759 0.017389 0.90878 0.0 0.937092 0.062908 0.0 0.037358 0.729663 0.05221 0.18077 0.040578 0.030689 0.897007 0.031726 0.008034 0.793431 0.117297 0.081237 0.268699 0.589472 0.07981 0.062018 0.125025 0.006463 0.707206 0.161306 MOTIF Kidney_P0_H3K4me3_46_23_0.638_6.558531e-312 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.032594 0.8675 0.038325 0.061581 0.046832 0.775964 0.014178 0.163026 0.013367 0.823619 0.072185 0.09083 0.100205 0.062699 0.040916 0.79618 0.003751 0.866615 0.072637 0.056997 0.112227 0.722664 0.047462 0.117646 0.068109 0.052262 0.827842 0.051787 0.001674 0.776044 0.168335 0.053947 0.042011 0.814987 0.063181 0.079821 0.152965 0.016524 0.671094 0.159417 MOTIF Stomach_E14.5_H3K4me3_37_24_0.669_2.877765e-309 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.026265 0.885374 0.053511 0.034851 0.066122 0.653069 0.053767 0.227041 0.003685 0.894655 0.016416 0.085244 0.098531 0.007194 0.050459 0.843815 0.0 0.939645 0.054633 0.005721 0.030365 0.800205 0.052293 0.117136 0.033195 0.03677 0.887738 0.042297 0.007569 0.71718 0.212991 0.06226 0.073092 0.66342 0.070346 0.193142 0.196632 0.032177 0.636215 0.134976 0.177103 0.453087 0.230477 0.139332 MOTIF Heart_E12.5_H3K9ac_67_56_0.525_3.299096e-51 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.019021 0.937033 0.032699 0.011247 0.059055 0.693645 0.020493 0.226808 0.049394 0.848096 0.060444 0.042066 0.042343 0.0 0.007406 0.950251 0.0 0.943895 0.056105 0.0 0.041989 0.55098 0.071191 0.33584 0.05161 0.0 0.942801 0.005589 0.011568 0.713936 0.220888 0.053608 0.049298 0.734465 0.097658 0.118579 MOTIF Kidney_E15.5_H3K9ac_51_22_0.603_8.939963e-240 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.045111 0.857972 0.043217 0.0537 0.050399 0.681956 0.056052 0.211593 0.019616 0.899536 0.012525 0.068323 0.094324 0.013066 0.085518 0.807091 0.000735 0.952172 0.045456 0.001636 0.128527 0.656051 0.059379 0.156043 0.027579 0.039949 0.882721 0.049752 0.006977 0.804486 0.109759 0.078778 0.052364 0.761624 0.064036 0.121976 0.239202 0.005246 0.57084 0.184712 0.049108 0.422592 0.297036 0.231264 MOTIF Liver_E12.5_H3K9ac_37_68_0.561_1.16581e-298 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.014905 0.874568 0.063195 0.047332 0.084483 0.797958 0.059719 0.05784 0.011155 0.694004 0.0 0.294841 0.037793 0.0 0.0 0.962207 0.0 0.97221 0.02779 0.0 0.024813 0.914385 0.047226 0.013576 0.056818 0.027885 0.847519 0.067777 0.0 0.652357 0.347643 0.0 0.065718 0.657872 0.050836 0.225574 MOTIF Midbrain_E16.5_H3K9ac_68_17_0.558_7.96714e-144 letter-probability matrix: alength= 4 w= 13 nsites= 100 E= 1.0e-1 0.021768 0.615349 0.060408 0.302475 0.030045 0.913243 0.014709 0.042003 0.127209 0.735762 0.041732 0.095296 0.021576 0.942098 0.009765 0.026561 0.065651 0.004414 0.015822 0.914113 0.001 0.972433 0.023232 0.003335 0.040486 0.594706 0.046402 0.318405 0.054245 0.063068 0.865463 0.017224 0.007047 0.591603 0.330783 0.070567 0.071033 0.802695 0.089098 0.037173 0.027565 0.0 0.540879 0.431556 0.019566 0.655757 0.262588 0.062088 0.024675 0.166489 0.769065 0.039771