MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Midbrain_E13.5_H3K9me3_50_142_0.526_1.903675e-14
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.061211	0.873565	0.059979	0.005244
0.045648	0.066063	0.021857	0.866431
0.118185	0.022282	0.859533	0.0
0.870337	0.020753	0.034843	0.074068
0.830331	0.005711	0.162998	0.00096
0.275462	0.005715	0.710751	0.008071
0.036022	0.032529	0.924318	0.007132
0.781816	0.125845	0.07822	0.014119
0.682414	0.065	0.235454	0.017132

MOTIF	Cranio-Facial_E12.5_H3K9me3_20_119_0.526_9.147965e-15
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.640282	0.109528	0.214068	0.036122
0.087833	0.808824	0.082535	0.020808
0.109904	0.039659	0.011027	0.839411
0.013672	0.0	0.986328	0.0
0.824923	0.060557	0.050837	0.063683
0.918733	0.026587	0.01266	0.04202
0.04829	0.01187	0.916969	0.022871
0.000933	0.207698	0.791369	0.0
0.864535	0.051077	0.042467	0.041922
0.672587	0.0	0.251785	0.075628

MOTIF	Hindbrain_E13.5_H3K9me3_67_57_0.520_1.773245e-23
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.871002	0.027726	0.083281	0.01799
0.146353	0.795649	0.0487	0.009298
0.009146	0.047503	0.008233	0.935118
0.006781	0.0	0.993219	0.0
0.803744	0.031047	0.097378	0.067831
0.892866	0.037188	0.018083	0.051862
0.015531	0.0653	0.91917	0.0
0.0	0.327375	0.667067	0.005558
0.94565	0.04568	0.0	0.008669
0.423988	0.0	0.179823	0.396188

MOTIF	Heart_E12.5_H3K9me3_113_133_0.514_2.391425e-58
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.846946	0.088391	0.004719	0.059945
0.161336	0.804145	0.034519	0.0
0.002365	0.050678	0.003574	0.943384
0.010056	0.015947	0.972466	0.001531
0.844274	0.02902	0.059153	0.067553
0.73759	0.030886	0.192338	0.039186
0.020268	0.019271	0.960461	0.0
0.022584	0.076372	0.901044	0.0
0.90763	0.00498	0.08739	0.0

MOTIF	Neural-Tube_E12.5_H3K9me3_91_139_0.510_2.053155e-16
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.802896	0.0	0.176697	0.020407
0.171567	0.730079	0.040239	0.058116
0.040817	0.128494	0.012655	0.818034
0.063523	0.045826	0.890651	0.0
0.82268	0.027639	0.067073	0.082608
0.726017	0.028589	0.204916	0.040477
0.0	0.000739	0.999261	0.0
0.002619	0.065332	0.929578	0.00247
0.88703	0.009129	0.093908	0.009934

MOTIF	Limb_E15.5_H3K9me3_1_117_0.537_4.99043e-09
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.534922	0.128576	0.301442	0.03506
0.041047	0.915015	0.020378	0.023561
0.032094	0.092339	0.020489	0.855078
0.018806	0.01501	0.956926	0.009259
0.879493	0.052071	0.006461	0.061974
0.971762	0.00082	0.0096	0.017817
0.11163	0.039585	0.844253	0.004531
0.062664	0.245926	0.667624	0.023786
0.608238	0.34388	0.023257	0.024625
0.367813	0.074791	0.217921	0.339475
0.008427	0.33804	0.046236	0.607297

MOTIF	Midbrain_E14.5_H3K9me3_41_61_0.520_2.394226e-10
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.088705	0.067374	0.331472	0.512448
0.840178	0.022389	0.122113	0.015321
0.026205	0.810162	0.135849	0.027784
0.104661	0.090701	0.003484	0.801154
0.019735	0.014778	0.962604	0.002882
0.924949	0.026495	0.038955	0.009601
0.968512	0.0	0.001835	0.029653
0.064849	0.021252	0.913899	0.0
0.133261	0.325079	0.482253	0.059406
0.915375	0.045339	0.012785	0.0265

MOTIF	Forebrain_E13.5_H3K9me3_41_134_0.528_3.200728e-22
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.719916	0.032386	0.176715	0.070983
0.128928	0.80043	0.052061	0.018582
0.003106	0.039029	0.001119	0.956746
0.015158	0.012964	0.970322	0.001555
0.80668	0.066721	0.052242	0.074358
0.883442	0.03401	0.034401	0.048146
0.223253	0.031438	0.745308	0.0
0.019118	0.05187	0.849984	0.079028
0.751641	0.183496	0.034936	0.029926

MOTIF	Lung_P0_H3K9me3_36_111_0.521_2.061338e-08
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.077136	0.439455	0.300923	0.182485
0.644262	0.23532	0.095984	0.024434
0.019742	0.941132	0.024914	0.014212
0.142649	0.036341	0.017458	0.803553
0.036191	0.031553	0.870827	0.061429
0.753109	0.131843	0.023276	0.091773
0.899495	0.019967	0.077142	0.003395
0.117836	0.010275	0.846646	0.025243
0.023434	0.167825	0.791955	0.016785
0.775322	0.169465	0.025798	0.029415

MOTIF	Hindbrain_P0_H3K9me3_41_139_0.521_3.009539e-08
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.767319	0.159068	0.054823	0.01879
0.248072	0.707193	0.042389	0.002345
0.212579	0.034974	0.0	0.752447
0.065685	0.00873	0.916544	0.009041
0.846453	0.071409	0.056849	0.025288
0.959128	0.003416	0.0	0.037456
0.05313	0.003605	0.922961	0.020304
0.172053	0.059555	0.762057	0.006335
0.723335	0.231133	0.003087	0.042445

MOTIF	Hindbrain_E12.5_H3K9me3_107_135_0.508_1.718824e-16
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.697921	0.035147	0.160111	0.106821
0.078107	0.782967	0.124564	0.014362
0.233985	0.044255	0.004532	0.717227
0.001243	0.029885	0.963841	0.005032
0.74077	0.058993	0.101319	0.098919
0.8083	0.007998	0.176317	0.007385
0.031137	0.009735	0.939457	0.019671
0.043132	0.102103	0.825364	0.029401
0.783752	0.13741	0.029805	0.049032

MOTIF	Midbrain_P0_H3K9me3_11_50_0.536_2.012066e-15
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.705338	0.077067	0.163705	0.05389
0.061544	0.848493	0.053636	0.036326
0.223909	0.054367	0.047046	0.674677
0.024879	0.010143	0.964843	0.000135
0.879623	0.04123	0.01483	0.064317
0.905547	0.010337	0.075077	0.009039
0.135251	0.001941	0.857298	0.005511
0.146834	0.098908	0.72782	0.026438
0.86674	0.105176	0.017683	0.010402
0.268715	0.142044	0.238595	0.350647

MOTIF	Forebrain_E15.5_H3K9me3_50_89_0.521_3.116079e-20
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.760132	0.011312	0.184929	0.043626
0.081021	0.838302	0.061391	0.019286
0.162773	0.017416	0.0018	0.81801
0.012251	0.018369	0.965916	0.003464
0.830762	0.007613	0.070258	0.091367
0.91996	0.018415	0.040837	0.020787
0.214414	0.004829	0.765516	0.015241
0.141875	0.115225	0.716636	0.026264
0.802401	0.1069	0.060024	0.030675

MOTIF	Heart_E15.5_H3K9me3_52_111_0.519_6.900439e-07
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.744365	0.056589	0.136583	0.062462
0.088339	0.765775	0.136904	0.008982
0.128526	0.03881	0.040695	0.791968
0.019086	0.015317	0.95785	0.007747
0.767784	0.070622	0.068735	0.092859
0.934009	0.01705	0.035063	0.013878
0.139361	0.041296	0.808005	0.011338
0.044452	0.14278	0.787494	0.025274
0.815813	0.13423	0.005351	0.044606

MOTIF	Neural-Tube_E15.5_H3K9me3_38_65_0.526_2.61197e-18
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.623031	0.107576	0.236492	0.032901
0.083519	0.839609	0.057753	0.019119
0.160737	0.037507	0.00696	0.794796
0.022395	0.01559	0.942222	0.019794
0.821906	0.022716	0.046105	0.109274
0.914614	0.008328	0.060652	0.016406
0.127562	0.017793	0.837233	0.017412
0.073016	0.121243	0.796998	0.008742
0.821026	0.111116	0.028933	0.038925
0.230962	0.315237	0.29582	0.15798

MOTIF	Midbrain_P0_H3K9me3_32_85_0.527_6.668803e-20
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.660279	0.019632	0.259735	0.060355
0.088855	0.008144	0.840393	0.062607
0.823407	0.091235	0.057963	0.027396
0.05307	0.920611	0.009181	0.017138
0.265546	0.019712	0.004225	0.710517
0.007779	0.043116	0.930786	0.01832
0.800422	0.067269	0.032772	0.099536
0.87956	0.002694	0.078114	0.039631
0.050784	0.1868	0.703555	0.058861

MOTIF	Forebrain_E12.5_H3K9me3_97_95_0.508_6.874259e-21
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.003288	0.679925	0.316786	0.0
0.026314	0.820937	0.089118	0.063632
0.010773	0.0271	0.013069	0.949057
0.030625	0.015364	0.081152	0.872858
0.0	0.847325	0.0	0.152675
0.888184	0.000988	0.082673	0.028154
0.027157	0.007412	0.828521	0.13691
0.0148	0.192023	0.018699	0.774477
0.00548	0.899453	0.013115	0.081951
0.330134	0.374925	0.007269	0.287672

MOTIF	Hindbrain_E15.5_H3K9me3_100_28_0.512_1.792349e-15
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.012144	0.676646	0.311209	0.0
0.036302	0.699091	0.099797	0.16481
0.003097	0.026759	0.0004	0.969744
0.057532	0.026254	0.008669	0.907544
0.0	0.892918	0.037219	0.069863
0.842119	0.0	0.115189	0.042693
0.0	0.039752	0.945065	0.015183
0.0	0.071986	0.008571	0.919443
0.006425	0.880402	0.090794	0.022379
0.125799	0.536575	0.002017	0.33561

MOTIF	Midbrain_E16.5_H3K9me3_79_62_0.512_1.177915e-13
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.007528	0.676972	0.3155	0.0
0.084974	0.915026	0.0	0.0
0.032157	0.0	0.001577	0.966266
0.061746	0.011701	0.045359	0.881194
0.0	0.809229	0.0	0.190771
0.837387	0.0	0.139336	0.023276
0.0663	0.005848	0.723707	0.204145
0.097605	0.101442	0.020296	0.780657
0.010161	0.943072	0.02814	0.018627

MOTIF	Midbrain_E11.5_H3K9me3_61_133_0.507_0.0003056302
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.185277	0.274418	0.537932	0.002373
0.45306	0.204894	0.342046	0.0
0.019964	0.880869	0.065656	0.033511
0.009849	0.142202	0.004754	0.843194
0.017981	0.024981	0.946817	0.010221
0.768402	0.059511	0.050241	0.121846
0.916212	0.023487	0.041039	0.019263
0.010533	0.033953	0.953152	0.002362
0.025473	0.050567	0.890497	0.033462
0.803968	0.059624	0.019566	0.116843

MOTIF	Midbrain_E15.5_H3K9me3_78_88_0.517_2.192816e-18
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.020606	0.746477	0.184224	0.048694
0.009751	0.912949	0.028196	0.049105
0.012879	0.068729	0.003074	0.915318
0.192407	0.033605	0.030693	0.743295
0.036758	0.952093	0.0	0.011149
0.947458	0.0044	0.036337	0.011805
0.027672	0.010206	0.809403	0.152719
0.034335	0.223593	0.13959	0.602482
0.031166	0.754032	0.083712	0.13109

MOTIF	Midbrain_P0_H3K9me3_30_61_0.527_6.377586e-21
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.010102	0.624953	0.270914	0.094031
0.009636	0.92607	0.047343	0.016951
0.00941	0.017686	0.001878	0.971026
0.023504	0.061403	0.036564	0.878529
0.015699	0.960396	0.002635	0.02127
0.819944	0.008068	0.058412	0.113575
0.045818	0.002555	0.788447	0.163181
0.049514	0.086459	0.178993	0.685034
0.034913	0.751706	0.014434	0.198947

MOTIF	Neural-Tube_E15.5_H3K9me3_73_42_0.517_1.957553e-28
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.027102	0.750689	0.177963	0.044246
0.038281	0.895676	0.04327	0.022772
0.0	0.040993	0.013688	0.945318
0.078138	0.006687	0.035309	0.879866
0.020787	0.951432	0.016196	0.011585
0.844846	0.000695	0.076782	0.077678
0.0	0.023821	0.951616	0.024563
0.023528	0.242018	0.138563	0.595891
0.010824	0.693806	0.142638	0.152732
0.139132	0.478654	0.036513	0.3457

MOTIF	Neural-Tube_E11.5_H3K9me3_66_50_0.505_0.0004109784
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.88451	0.0	0.11549	0.0
0.057897	0.443855	0.373522	0.124726
0.90653	0.016014	0.053959	0.023497
0.044051	0.919172	0.017665	0.019112
0.033701	0.067676	0.013533	0.88509
0.028738	0.034428	0.919142	0.017692
0.601049	0.087897	0.037577	0.273477
0.823315	0.007936	0.162448	0.006302
0.011917	0.003563	0.972977	0.011542
0.06631	0.049029	0.873261	0.0114

MOTIF	Neural-Tube_E14.5_H3K9me3_27_56_0.521_7.872241e-06
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.075883	0.86063	0.017555	0.045933
0.836105	0.01177	0.030199	0.121926
0.03607	0.817761	0.083887	0.062282
0.225577	0.006737	0.079842	0.687844
0.1263	0.007911	0.824551	0.041239
0.033795	0.083527	0.046584	0.836094
0.772731	0.010333	0.043142	0.173794
0.051748	0.023663	0.841505	0.083084
0.037666	0.010719	0.726675	0.22494

MOTIF	Kidney_P0_H3K9me3_61_70_0.514_0.006169598
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.016257	0.872149	0.089174	0.02242
0.872895	0.031812	0.017184	0.078109
0.01058	0.713475	0.152872	0.123073
0.084033	0.022156	0.100715	0.793096
0.050121	0.015825	0.827594	0.10646
0.165386	0.049972	0.019325	0.765316
0.840963	0.053562	0.042987	0.062488
0.026543	0.080902	0.795053	0.097502
0.036302	0.036821	0.877858	0.04902

MOTIF	Hindbrain_E11.5_H3K9me3_7_53_0.537_2.088631e-10
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.077409	0.834806	0.043952	0.043833
0.797589	0.029479	0.123869	0.049063
0.02503	0.880706	0.021269	0.072996
0.140813	0.016113	0.036649	0.806425
0.032206	0.000401	0.933236	0.034156
0.217291	0.103897	0.056821	0.62199
0.805121	0.070079	0.092413	0.032386
0.064139	0.075667	0.707015	0.153178
0.046591	0.015478	0.893375	0.044556
0.232493	0.644077	0.052509	0.070921

MOTIF	Intestine_E15.5_H3K9me3_12_97_0.532_3.336378e-05
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.90874	0.037195	0.054064
0.780963	0.070255	0.08767	0.061112
0.021748	0.851973	0.052452	0.073828
0.168434	0.035722	0.115039	0.680805
0.080573	0.001309	0.852447	0.065671
0.176205	0.170182	0.088822	0.564791
0.926518	0.032293	0.013429	0.027761
0.060008	0.013821	0.819918	0.106253
0.015371	0.033808	0.931859	0.018961

MOTIF	Limb_E15.5_H3K9me3_52_59_0.515_9.561143e-06
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.086476	0.885007	0.019182	0.009334
0.793696	0.144437	0.042941	0.018926
0.030253	0.921337	0.013014	0.035396
0.207101	0.021745	0.067407	0.703747
0.060852	0.009335	0.877224	0.052589
0.166517	0.133054	0.062249	0.63818
0.848462	0.05216	0.036852	0.062526
0.048489	0.019103	0.839644	0.092764
0.041536	0.049207	0.88359	0.025666

MOTIF	Stomach_E15.5_H3K9me3_10_57_0.533_0.0001809805
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.03746	0.800384	0.137515	0.024641
0.777346	0.147784	0.025616	0.049254
0.051221	0.883897	0.035853	0.029029
0.191735	0.016912	0.126391	0.664962
0.009357	0.024565	0.913267	0.052811
0.059236	0.07369	0.061782	0.805292
0.839495	0.071925	0.04137	0.04721
0.073954	0.012725	0.822471	0.090851
0.043184	0.037911	0.885652	0.033253
0.285199	0.453372	0.176358	0.08507
0.936809	0.045376	0.0	0.017815

MOTIF	Neural-Tube_E14.5_H3K9me3_19_40_0.526_1.086625e-05
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.901718	0.034738	0.04212	0.021424
0.01479	0.707806	0.035058	0.242346
0.037558	0.005605	0.020567	0.936269
0.133606	0.019393	0.809304	0.037697
0.056128	0.124097	0.061733	0.758042
0.912219	0.037511	0.038058	0.012212
0.080344	0.031004	0.830562	0.05809
0.0	0.01273	0.978616	0.008654
0.719698	0.220991	0.005653	0.053658

MOTIF	Lung_E15.5_H3K9me3_50_49_0.511_0.0001085539
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.083292	0.506148	0.41056	0.0
0.70126	0.029891	0.194754	0.074095
0.020124	0.918688	0.025025	0.036163
0.134094	0.074132	0.087356	0.704418
0.04793	0.002209	0.888322	0.061539
0.294874	0.039367	0.043918	0.621841
0.886487	0.013787	0.092037	0.007689
0.0087	0.003853	0.969853	0.017594
0.013442	0.058789	0.914302	0.013467
0.969658	0.001511	0.028831	0.0

MOTIF	Stomach_P0_H3K9me3_9_58_0.535_1.72194e-05
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.129851	0.413922	0.390626	0.065601
0.687721	0.023924	0.223044	0.06531
0.019536	0.839399	0.050116	0.090949
0.022042	0.019901	0.073554	0.884502
0.064357	0.111574	0.794508	0.02956
0.152345	0.038782	0.048889	0.759983
0.835365	0.042568	0.110452	0.011614
0.07059	0.002289	0.910212	0.016909
0.01	0.123825	0.789367	0.076808
0.812188	0.131131	0.03378	0.0229