MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Kidney_E15.5_H3K4me3_84_86_0.513_1.229939e-08 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.683164 0.135488 0.0 0.181348 0.004702 0.210593 0.784705 0.0 0.002358 0.002967 0.994674 0.0 0.047914 0.0077 0.065211 0.879175 0.0 0.091192 0.908808 0.0 0.80767 0.081306 0.06342 0.047604 0.011696 0.070938 0.910744 0.006621 0.018442 0.772802 0.044128 0.164628 0.247255 0.010307 0.694407 0.04803 0.0 0.335163 0.153123 0.511714 0.0 0.630222 0.369778 0.0 0.0 0.0 0.077191 0.922809 MOTIF Liver_E14.5_H3K4me3_71_98_0.542_2.963522e-84 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.794892 0.125286 0.029441 0.050381 0.0 0.074784 0.739552 0.185664 0.011414 0.047549 0.941038 0.0 0.0 0.023875 0.049792 0.926334 0.023606 0.0 0.976394 0.0 0.408526 0.040831 0.518251 0.032392 0.239769 0.029716 0.730515 0.0 0.07149 0.876175 0.038767 0.013569 0.11903 0.013944 0.867026 0.0 MOTIF Kidney_E14.5_H3K4me3_87_47_0.531_6.875035e-72 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.016853 0.791402 0.009775 0.18197 0.129694 0.830456 0.010686 0.029164 0.039002 0.036633 0.725555 0.198811 0.0 0.679541 0.317302 0.003157 0.004343 0.048162 0.0 0.947495 0.0 0.984619 0.012105 0.003276 0.681335 0.039049 0.07443 0.205186 0.0 0.97815 0.020054 0.001796 0.0 0.935878 0.040325 0.023797 MOTIF Forebrain_P0_H3K4me3_86_100_0.503_2.691299e-10 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.438386 0.378144 0.18347 0.0 0.738185 0.049059 0.115762 0.096994 0.002019 0.146349 0.84602 0.005613 0.0 0.032787 0.967213 0.0 0.106196 0.030533 0.071006 0.792265 0.114045 0.03191 0.854045 0.0 0.899882 0.011642 0.069558 0.018917 0.007046 0.154588 0.830691 0.007675 0.036909 0.611002 0.165297 0.186792 0.099534 0.117497 0.762872 0.020096 MOTIF Heart_E13.5_H3K4me3_96_88_0.526_9.725908e-67 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.871972 0.108733 0.0 0.019296 0.007403 0.131395 0.838415 0.022786 0.073965 0.076749 0.849286 0.0 0.02686 0.095407 0.035224 0.842508 0.005322 0.036016 0.958662 0.0 0.712843 0.103485 0.041618 0.142053 0.005273 0.19579 0.795354 0.003582 0.017214 0.768386 0.021544 0.192856 0.150103 0.02296 0.795703 0.031234 MOTIF Limb_E12.5_H3K4me3_84_69_0.537_1.203066e-50 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.835438 0.129741 0.019105 0.015716 0.003973 0.250248 0.740796 0.004984 0.001458 0.064329 0.934213 0.0 0.042006 0.028528 0.022285 0.907181 0.068742 0.059735 0.871523 0.0 0.857358 0.050241 0.043194 0.049207 0.009449 0.20886 0.77871 0.002981 0.024149 0.714788 0.050544 0.210519 0.025668 0.033069 0.928003 0.013261 MOTIF Midbrain_E15.5_H3K4me3_94_85_0.518_1.995908e-52 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.868443 0.124151 0.0 0.007406 0.0 0.268822 0.724265 0.006913 0.006467 0.030968 0.962564 0.0 0.079126 0.015261 0.051909 0.853705 0.083955 0.055858 0.858489 0.001698 0.764287 0.021291 0.053718 0.160704 0.006282 0.076746 0.912308 0.004664 0.021622 0.753954 0.041897 0.182527 0.207077 0.072024 0.698742 0.022158 MOTIF Stomach_E16.5_H3K4me3_89_106_0.514_6.489293e-16 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.882722 0.068407 0.04887 0.001651 0.697508 0.167182 0.133659 0.398223 0.058944 0.398834 0.143999 0.017367 0.899796 0.082837 0.0 0.05732 0.0 0.03978 0.902901 0.0 0.95781 0.03505 0.00714 0.937565 0.008804 0.035569 0.018062 0.0 0.879147 0.120853 0.0 0.019452 0.924642 0.044482 0.011424 0.050655 0.0 0.359302 0.590043 MOTIF Liver_E16.5_H3K4me2_37_29_0.583_7.908418e-314 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.116741 0.410203 0.054425 0.418631 0.017098 0.885293 0.017366 0.080243 0.026973 0.870448 0.075372 0.027206 0.150495 0.064574 0.776935 0.007996 0.005314 0.944888 0.047535 0.002263 0.060898 0.019439 0.045591 0.874071 0.0 0.98214 0.01786 0.0 0.318291 0.062017 0.558188 0.061504 0.0 0.991267 0.008733 0.0 0.029641 0.283375 0.31052 0.376464 MOTIF Intestine_P0_H3K4me2_39_17_0.583_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.119388 0.0 0.0 0.880612 0.0256 0.652599 0.0 0.3218 0.039271 0.750855 0.029837 0.180038 0.016041 0.043998 0.926726 0.013235 0.009624 0.950949 0.039427 0.0 0.046895 0.09636 0.042376 0.814369 0.0 0.965772 0.034228 0.0 0.044906 0.02235 0.845645 0.087099 0.0 0.88201 0.032738 0.085252 0.036973 0.475728 0.026154 0.461146 MOTIF Neural-Tube_E11.5_H3K4me2_68_63_0.556_2.835068e-130 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.921732 0.028865 0.049403 0.015918 0.897311 0.044172 0.042598 0.0 0.0566 0.518837 0.424563 0.0 0.974369 0.025631 0.0 0.135338 0.0 0.020247 0.844415 0.0 0.941239 0.054778 0.003983 0.30634 0.033147 0.539727 0.120785 0.0 0.924594 0.075406 0.0 0.026828 0.928844 0.044328 0.0 MOTIF Liver_E15.5_H3K4me2_3_22_0.635_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.014755 0.722838 0.0292 0.233207 0.015373 0.932842 0.03153 0.020255 0.006376 0.039053 0.954571 0.0 0.095489 0.816044 0.031748 0.056719 0.127683 0.104805 0.128483 0.639029 0.0 0.989242 0.010758 0.0 0.016007 0.037591 0.931877 0.014525 0.0 0.613247 0.101595 0.285157 0.137626 0.785651 0.027177 0.049546 MOTIF Cranio-Facial_E15.5_H3K4me2_22_30_0.628_1.814286e-312 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.027644 0.897548 0.029559 0.045249 0.033231 0.943387 0.019865 0.003517 0.032646 0.042717 0.859951 0.064686 0.136396 0.554859 0.306472 0.002273 0.35193 0.016071 0.0 0.631999 0.0 0.951522 0.048478 0.0 0.048892 0.043195 0.829666 0.078248 0.003256 0.940455 0.052516 0.003772 0.173677 0.760717 0.014484 0.051121 MOTIF Lung_P0_H3K4me2_37_28_0.599_2.700169e-311 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.020057 0.911913 0.043887 0.024143 0.0381 0.875807 0.05406 0.032033 0.160658 0.030575 0.777399 0.031368 0.004725 0.764227 0.231048 0.0 0.120331 0.021877 0.007842 0.84995 0.0 0.953515 0.046485 0.0 0.265537 0.069725 0.594651 0.070088 0.0 0.923051 0.069677 0.007271 0.223036 0.726207 0.021109 0.029648 0.087299 0.404007 0.449982 0.058712 MOTIF Forebrain_E13.5_H3K4me2_25_15_0.607_1.041426e-311 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.007619 0.920574 0.055804 0.016004 0.156066 0.616433 0.05456 0.17294 0.076491 0.060277 0.840623 0.022609 0.061783 0.910887 0.027331 0.0 0.149987 0.017493 0.075902 0.756617 0.0 0.970528 0.022536 0.006936 0.145495 0.056744 0.712622 0.08514 0.001432 0.81065 0.082216 0.105703 0.112432 0.761841 0.02735 0.098376 0.044577 0.318562 0.288031 0.348829 0.081256 0.353732 0.174687 0.390325 MOTIF Kidney_E14.5_H3K4me2_43_20_0.609_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.010575 0.911873 0.05292 0.024631 0.079489 0.812568 0.08157 0.026373 0.044613 0.029155 0.787551 0.138681 0.068298 0.766176 0.162898 0.002628 0.077034 0.040467 0.007112 0.875386 0.0 0.928674 0.059493 0.011833 0.031322 0.075113 0.63566 0.257905 0.001522 0.857328 0.06183 0.079321 0.121837 0.784888 0.051554 0.041721 0.070261 0.391375 0.162121 0.376242 MOTIF Heart_E11.5_H3K4me2_26_18_0.600_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.130174 0.748422 0.088987 0.032417 0.039194 0.729614 0.018868 0.212325 0.101307 0.04836 0.824142 0.026191 0.052549 0.934391 0.01306 0.0 0.109048 0.048977 0.024655 0.81732 0.0 0.981797 0.018203 0.0 0.20174 0.010735 0.745777 0.041748 0.0 0.785339 0.118051 0.09661 0.103508 0.807836 0.034189 0.054468 0.126632 0.070276 0.644151 0.158941 MOTIF Kidney_E16.5_H3K4me2_34_20_0.613_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.072447 0.795596 0.060292 0.071665 0.08754 0.685284 0.063485 0.163692 0.073104 0.082655 0.814705 0.029536 0.026319 0.947391 0.026291 0.0 0.094647 0.020561 0.07987 0.804923 0.0 0.960526 0.034066 0.005408 0.143441 0.056075 0.706932 0.093552 0.0 0.695691 0.245548 0.058762 0.065986 0.772344 0.042295 0.119376 MOTIF Midbrain_E13.5_H3K4me2_38_38_0.599_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.051801 0.862749 0.041571 0.043879 0.229956 0.705636 0.033814 0.030594 0.089405 0.063222 0.827025 0.020348 0.044736 0.94479 0.010474 0.0 0.052653 0.026323 0.029435 0.891589 0.0 0.963315 0.032407 0.004277 0.199539 0.084155 0.642844 0.073462 0.0 0.93922 0.056713 0.004067 0.086582 0.581062 0.042026 0.29033 MOTIF Liver_P0_H3K4me2_29_27_0.575_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.909404 0.05888 0.031716 0.126977 0.779604 0.068315 0.025105 0.106531 0.027885 0.844169 0.021415 0.0 0.953022 0.046978 0.0 0.082619 0.028474 0.011899 0.877007 0.0 0.975147 0.019577 0.005277 0.216763 0.043417 0.707534 0.032286 0.0 0.755678 0.116015 0.128307 0.208549 0.696105 0.060337 0.035009 MOTIF Lung_E16.5_H3K4me2_29_24_0.604_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.015463 0.746555 0.07336 0.164623 0.127788 0.696695 0.15393 0.021586 0.115391 0.033798 0.819435 0.031375 0.047622 0.904678 0.0477 0.0 0.109994 0.079531 0.115031 0.695444 0.0 0.97085 0.025326 0.003824 0.211155 0.05318 0.685233 0.050431 0.0 0.908311 0.031746 0.059944 0.080653 0.831303 0.046195 0.04185 MOTIF Neural-Tube_E13.5_H3K4me2_32_18_0.616_2.92668e-315 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.952664 0.027204 0.020132 0.212515 0.551276 0.222455 0.013754 0.083011 0.057162 0.833528 0.026299 0.046162 0.927212 0.026627 0.0 0.088835 0.042934 0.0 0.86823 0.000351 0.953941 0.045708 0.0 0.171015 0.071373 0.639248 0.118364 0.002006 0.875606 0.045413 0.076976 0.091254 0.776777 0.067213 0.064756 0.061233 0.271966 0.447271 0.21953 MOTIF Liver_P0_H3K4me2_15_16_0.600_2.423355e-315 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.030631 0.969369 0.0 0.0 0.128064 0.034492 0.629442 0.208002 0.129515 0.829668 0.040817 0.0 0.104705 0.0 0.030013 0.865282 0.0 0.968722 0.031278 0.0 0.174809 0.026894 0.730543 0.067755 0.004841 0.850952 0.043889 0.100317 0.099157 0.752133 0.079141 0.069568 0.042368 0.028476 0.894458 0.034698 0.233433 0.406212 0.323698 0.036657 MOTIF Stomach_E16.5_H3K4me2_9_18_0.645_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.207211 0.734189 0.025127 0.033473 0.073081 0.048131 0.698862 0.179927 0.072864 0.888684 0.038452 0.0 0.163338 0.0 0.042848 0.793814 0.0 0.967191 0.022771 0.010039 0.042273 0.039882 0.863256 0.054589 0.002677 0.8525 0.067425 0.077398 0.069825 0.711562 0.037817 0.180797 0.010604 0.054611 0.83452 0.100265 MOTIF Forebrain_E12.5_H3K9ac_26_21_0.610_0 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.010911 0.815676 0.050899 0.122514 0.002564 0.645739 0.077787 0.27391 0.144388 0.03515 0.770899 0.049564 0.008613 0.968705 0.022682 0.0 0.195435 0.031485 0.080511 0.692569 0.0 0.962716 0.037284 0.0 0.065646 0.014999 0.841732 0.077623 0.0 0.932557 0.055417 0.012026 0.189225 0.730565 0.038767 0.041442 0.071017 0.273276 0.393317 0.26239 0.132679 0.172694 0.359994 0.334633 MOTIF Kidney_P0_H3K9ac_37_29_0.595_2.572321e-309 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.013418 0.727824 0.213933 0.044825 0.118071 0.015694 0.836311 0.029923 0.028464 0.923208 0.036682 0.011645 0.191443 0.0 0.009715 0.798842 0.0 0.990006 0.0 0.009994 0.221164 0.033049 0.463269 0.282518 0.005928 0.910341 0.076899 0.006831 0.037318 0.857151 0.045305 0.060226 0.097063 0.034661 0.726483 0.141792 MOTIF Limb_E12.5_H3K9ac_28_35_0.596_8.859932e-309 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.740365 0.222545 0.03709 0.104048 0.032954 0.638836 0.224162 0.009191 0.936211 0.054598 0.0 0.06255 0.067677 0.0 0.869773 0.0 0.990534 0.009466 0.0 0.388799 0.0 0.528261 0.08294 0.0 0.950849 0.049151 0.0 0.134617 0.783385 0.064567 0.017431 0.0 0.0 0.926483 0.073517 MOTIF Hindbrain_E13.5_H3K9ac_16_21_0.596_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.21066 0.541538 0.202713 0.045088 0.118805 0.047488 0.798884 0.034824 0.089621 0.872448 0.037931 0.0 0.096989 0.038092 0.0 0.864919 0.0 0.832599 0.167401 0.0 0.119219 0.057408 0.782958 0.040415 0.007768 0.93545 0.056782 0.0 0.044838 0.807562 0.095211 0.052389 0.049094 0.0 0.90349 0.047416 MOTIF Intestine_E14.5_H3K9ac_17_18_0.655_2.54023e-310 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.015389 0.0 0.977159 0.007452 0.043554 0.864574 0.0 0.091872 0.049641 0.062029 0.820695 0.067636 0.01953 0.082369 0.89137 0.006731 0.218755 0.647269 0.085712 0.048264 0.007804 0.058576 0.93362 0.0 0.730069 0.009626 0.016999 0.243306 0.010558 0.021108 0.887068 0.081267 0.129861 0.661254 0.046084 0.162801 0.03899 0.249066 0.456498 0.255446 MOTIF Forebrain_E11.5_H3K9ac_36_31_0.600_4.616812e-311 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.161213 0.17876 0.649355 0.010672 0.14763 0.770207 0.061596 0.020567 0.250593 0.031425 0.679549 0.038432 0.05589 0.062979 0.88113 0.0 0.076949 0.692217 0.022351 0.208483 0.007658 0.068161 0.920146 0.004034 0.843416 0.055695 0.046798 0.054091 0.0 0.040641 0.941907 0.017453 0.008305 0.80055 0.033653 0.157492 MOTIF Kidney_E14.5_H3K9ac_36_25_0.607_9.722309e-315 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.110513 0.008938 0.850197 0.030353 0.121576 0.81094 0.02529 0.042194 0.113077 0.030805 0.789773 0.066344 0.05354 0.050381 0.896079 0.0 0.191832 0.679307 0.039528 0.089333 0.0 0.147081 0.85007 0.002849 0.812344 0.037354 0.031774 0.118527 0.008878 0.067991 0.821457 0.101675 0.081132 0.796355 0.050043 0.07247 MOTIF Lung_P0_H3K9ac_22_19_0.657_9.072356e-309 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.117189 0.027353 0.801478 0.053981 0.095836 0.832597 0.018592 0.052975 0.203869 0.014996 0.746632 0.034503 0.069647 0.041155 0.880468 0.00873 0.105952 0.709723 0.046068 0.138256 0.001422 0.107602 0.890976 0.0 0.802725 0.072357 0.023502 0.101416 0.0 0.04007 0.861593 0.098337 0.140743 0.756821 0.060558 0.041879 0.117287 0.134433 0.658203 0.090076 MOTIF Stomach_E14.5_H3K9ac_44_34_0.635_7.35117e-274 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.115787 0.039012 0.83483 0.010371 0.025101 0.962244 0.0 0.012655 0.268511 0.035051 0.638329 0.058109 0.0113 0.007841 0.980859 0.0 0.114687 0.823852 0.022275 0.039185 0.0 0.074512 0.925488 0.0 0.813184 0.0 0.02539 0.161426 0.0 0.018363 0.861011 0.120627 0.074224 0.64137 0.026627 0.257779