MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Lung_P0_H3K27me3_6_33_0.571_1.886162e-42 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.013088 0.040164 0.946747 0.0 0.016404 0.928382 0.0 0.055214 0.0 0.065585 0.922732 0.011683 0.284867 0.025984 0.509795 0.179355 0.006264 0.94144 0.0 0.052296 0.033046 0.875313 0.057003 0.034638 0.0 0.216136 0.744491 0.039372 0.009166 0.044992 0.917916 0.027927 0.533805 0.020705 0.067399 0.378091 MOTIF Forebrain_E13.5_H3K4me2_27_29_0.606_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.935531 0.057426 0.007043 0.028016 0.075703 0.83062 0.065661 0.049435 0.091477 0.479304 0.379785 0.0 0.923887 0.076113 0.0 0.0 0.716954 0.050542 0.232503 0.019556 0.010382 0.951078 0.018984 0.013512 0.026871 0.952406 0.00721 0.877692 0.0 0.073821 0.048487 0.239207 0.003317 0.749371 0.008104 MOTIF Liver_E13.5_H3K4me2_28_28_0.579_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.009341 0.857986 0.0 0.132674 0.0 0.058497 0.760566 0.180937 0.01258 0.07821 0.784585 0.124625 0.03485 0.926954 0.019253 0.018942 0.067379 0.701402 0.062369 0.168851 0.169098 0.034553 0.762552 0.033798 0.007567 0.055412 0.919572 0.017448 0.875704 0.044197 0.029803 0.050296 0.122401 0.118545 0.759054 0.0 MOTIF Limb_E12.5_H3K4me2_45_52_0.586_4.777087e-284 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.359395 0.209377 0.431228 0.0 0.02372 0.861184 0.0 0.115096 0.284741 0.027945 0.502045 0.185269 0.010169 0.137023 0.816595 0.036213 0.032383 0.936184 0.013791 0.017642 0.009632 0.724189 0.033777 0.232402 0.051276 0.033608 0.883071 0.032045 0.0 0.0 0.985315 0.014685 0.909129 0.01552 0.04682 0.02853 MOTIF Neural-Tube_E15.5_H3K4me2_37_45_0.604_3.514685e-314 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.22303 0.106668 0.670302 0.0 0.018456 0.869554 0.019335 0.092655 0.192426 0.054847 0.566971 0.185756 0.00664 0.017204 0.885977 0.090179 0.020503 0.923976 0.037924 0.017597 0.015566 0.852312 0.037407 0.094714 0.022743 0.0 0.906364 0.070893 0.021448 0.02633 0.826707 0.125515 0.866508 0.055895 0.0 0.077597 0.018758 0.142968 0.838274 0.0 MOTIF Limb_E13.5_H3K4me2_16_23_0.630_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.023608 0.976392 0.0 0.0 0.914477 0.0 0.085523 0.034464 0.0899 0.875636 0.0 0.232985 0.0 0.481097 0.285918 0.0 0.907726 0.075828 0.016446 0.04451 0.858284 0.057152 0.040054 0.0 0.0 0.958675 0.041325 0.056158 0.044953 0.772589 0.126299 0.910592 0.036972 0.0 0.052437 MOTIF Intestine_P0_H3K4me2_27_22_0.592_8.135791e-311 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.0 1.0 0.0 0.210971 0.708359 0.0 0.080671 0.089464 0.030312 0.834134 0.04609 0.031068 0.242736 0.618168 0.108028 0.018467 0.880498 0.016025 0.08501 0.0 0.883079 0.032665 0.084256 0.048456 0.0 0.931998 0.019546 0.0 0.075796 0.924204 0.0 0.81488 0.0161 0.0 0.16902 MOTIF Intestine_E16.5_H3K4me2_44_40_0.595_3.664907e-312 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.000295 0.087111 0.912595 0.0 0.014483 0.78618 0.033735 0.165602 0.090691 0.034919 0.818399 0.055991 0.190436 0.042384 0.652162 0.115018 0.026831 0.893876 0.079293 0.0 0.148275 0.595983 0.062284 0.193457 0.150706 0.069343 0.773028 0.006923 0.0 0.035593 0.934117 0.03029 0.943273 0.015573 0.015654 0.025499 MOTIF Stomach_E16.5_H3K4me2_24_20_0.614_1.397559e-313 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.066008 0.103247 0.806707 0.024038 0.056767 0.832052 0.021777 0.089405 0.03109 0.146533 0.705687 0.11669 0.106175 0.069412 0.782759 0.041655 0.10332 0.754932 0.049111 0.092637 0.024468 0.773933 0.021749 0.17985 0.071838 0.009512 0.889673 0.028977 0.011144 0.048555 0.919268 0.021033 0.890044 0.011258 0.053276 0.045422 0.260639 0.38696 0.342608 0.009794 MOTIF Lung_E16.5_H3K4me3_64_42_0.566_3.68513e-147 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.873405 0.0 0.0 0.126595 0.0 0.006054 0.993946 0.0 0.067406 0.909636 0.0 0.022957 0.382216 0.063219 0.521191 0.033374 0.022509 0.033684 0.551213 0.392594 0.0 0.981467 0.017197 0.001336 0.05278 0.837894 0.0 0.109326 0.071734 0.0 0.911559 0.016707 0.019199 0.015853 0.839243 0.125705 0.908767 0.0 0.0 0.091233 MOTIF Forebrain_E14.5_H3K4me3_48_32_0.648_6.190642e-314 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.172407 0.713803 0.058097 0.055693 0.071595 0.090474 0.721525 0.116405 0.103912 0.051392 0.757545 0.087151 0.048832 0.884951 0.027446 0.038771 0.037561 0.692335 0.100711 0.169393 0.110629 0.023533 0.861129 0.004709 0.00133 0.058664 0.933741 0.006265 0.903695 0.028214 0.023617 0.044474 0.150159 0.050327 0.797092 0.002422 MOTIF Hindbrain_E13.5_H3K4me3_23_24_0.683_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.009928 0.086599 0.903473 0.0 0.117109 0.73083 0.045216 0.106846 0.140103 0.040766 0.699669 0.119461 0.09316 0.054131 0.769441 0.083268 0.084181 0.716728 0.051911 0.14718 0.06274 0.810187 0.088784 0.038288 0.043177 0.004721 0.934369 0.017733 0.010477 0.029571 0.946257 0.013696 0.890331 0.028717 0.046187 0.034765 0.158515 0.113471 0.728014 0.0 MOTIF Intestine_E16.5_H3K4me3_41_42_0.621_3.224618e-319 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.006995 0.088274 0.904731 0.0 0.03066 0.681565 0.0 0.287775 0.036252 0.05412 0.682511 0.227116 0.173374 0.073946 0.690858 0.061822 0.0 0.962279 0.037721 0.0 0.078211 0.789691 0.027014 0.105084 0.041651 0.0 0.949412 0.008937 0.0 0.058722 0.84076 0.100517 0.970648 0.0 0.0 0.029352 0.334459 0.028984 0.636557 0.0 MOTIF Kidney_E15.5_H3K4me3_40_51_0.646_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.019529 0.980471 0.0 0.020598 0.809572 0.026036 0.143794 0.016366 0.024199 0.804617 0.154818 0.117535 0.011722 0.801834 0.068909 0.018854 0.78982 0.091373 0.099952 0.012281 0.70933 0.036181 0.242209 0.186804 0.03823 0.752229 0.022737 0.0 0.046157 0.885635 0.068208 0.898699 0.02283 0.068272 0.010199 MOTIF Liver_E15.5_H3K4me3_32_37_0.646_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.004889 0.206363 0.788748 0.0 0.0 0.949671 0.014812 0.035516 0.016659 0.0 0.759753 0.223588 0.140526 0.056221 0.768635 0.034618 0.157006 0.790748 0.004191 0.048055 0.055918 0.814065 0.027725 0.102291 0.016462 0.034738 0.878693 0.070107 0.034533 0.034018 0.838969 0.09248 0.787349 0.051883 0.030217 0.130551 MOTIF Liver_P0_H3K4me3_24_26_0.661_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.004186 0.015652 0.980162 0.0 0.045434 0.810876 0.034841 0.108849 0.026894 0.055967 0.89743 0.019709 0.162839 0.034366 0.784892 0.017903 0.171483 0.786589 0.026348 0.01558 0.14523 0.718494 0.107298 0.028978 0.160733 0.009839 0.683254 0.146175 0.085939 0.057275 0.800533 0.056254 0.769944 0.109032 0.096567 0.024457 MOTIF Heart_E16.5_H3K4me3_36_30_0.617_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.058405 0.941595 0.0 0.088516 0.694288 0.020962 0.196234 0.297309 0.052999 0.621231 0.028461 0.231069 0.055813 0.670528 0.042591 0.005599 0.945798 0.041545 0.007057 0.056143 0.857498 0.010046 0.076313 0.038951 0.008796 0.933118 0.019134 0.007623 0.079345 0.899969 0.013063 0.917494 0.039478 0.016415 0.026613 0.220045 0.581318 0.198637 0.0 MOTIF Midbrain_E14.5_H3K4me3_37_53_0.659_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.141508 0.858492 0.0 0.043711 0.628006 0.058225 0.270058 0.011845 0.022093 0.966062 0.0 0.265493 0.0 0.669677 0.064831 0.0 1.0 0.0 0.0 0.058628 0.868441 0.016488 0.056443 0.046246 0.037132 0.89895 0.017673 0.050301 0.046103 0.871632 0.031965 0.942659 0.040357 0.0 0.016984 MOTIF Heart_E12.5_H3K4me3_37_52_0.644_2.441707e-309 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.881743 0.0 0.030592 0.087665 0.0 0.290836 0.709164 0.0 0.0 0.674723 0.0 0.325277 0.0 0.042944 0.957056 0.0 0.039361 0.061118 0.890661 0.00886 0.0 0.884562 0.109858 0.00558 0.018189 0.839983 0.057819 0.084008 0.004682 0.125427 0.869891 0.0 0.157608 0.034964 0.729752 0.077677 MOTIF Hindbrain_E14.5_H3K4me3_39_36_0.646_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.91848 0.0 0.08152 0.016118 0.861678 0.033153 0.08905 0.355894 0.043508 0.585359 0.015239 0.007556 0.0 0.958351 0.034093 0.0591 0.799365 0.03071 0.110826 0.057521 0.843215 0.0878 0.011465 0.018774 0.0 0.9348 0.046426 0.0 0.771883 0.228117 0.0 0.068126 0.0 0.0 0.931874 MOTIF Limb_E11.5_H3K4me3_35_41_0.683_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.93528 0.044397 0.0 0.020323 0.0 0.031911 0.968089 0.0 0.0763 0.880999 0.0 0.042701 0.036008 0.045067 0.918925 0.0 0.057461 0.244135 0.418489 0.279915 0.013083 0.942413 0.022234 0.02227 0.050102 0.733535 0.048293 0.16807 0.047858 0.133579 0.782437 0.036126 0.121607 0.01853 0.804549 0.055314 MOTIF Limb_E12.5_H3K4me3_24_46_0.655_1.047898e-317 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.853675 0.024854 0.0 0.121471 0.0 0.005128 0.994872 0.0 0.054261 0.733051 0.027022 0.185666 0.016476 0.041861 0.922028 0.019634 0.020476 0.071693 0.614807 0.293023 0.137391 0.729971 0.037847 0.094792 0.022391 0.839633 0.0 0.137976 0.015387 0.049202 0.900352 0.035059 0.116977 0.081781 0.702251 0.098991 MOTIF Midbrain_E16.5_H3K4me3_53_57_0.595_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.941656 0.0 0.0 0.058344 0.0 0.014815 0.972138 0.013048 0.06189 0.808895 0.090803 0.038413 0.081016 0.0 0.907501 0.011483 0.165719 0.468371 0.344949 0.020961 0.0 1.0 0.0 0.0 0.073183 0.597324 0.019319 0.310175 0.0 0.156506 0.843494 0.0 0.026705 0.0 0.950391 0.022904 MOTIF Heart_E16.5_H3K27me3_15_18_0.532_9.957554e-29 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.013322 0.887106 0.012976 0.086596 0.049276 0.863517 0.042129 0.045078 0.085783 0.003648 0.893343 0.017226 0.054151 0.0 0.841812 0.104037 0.196577 0.614396 0.162418 0.026609 0.028091 0.8603 0.032726 0.078883 0.205071 0.010231 0.775848 0.008849 0.060572 0.889338 0.037269 0.012821 0.127108 0.662838 0.045477 0.164577 MOTIF Liver_E16.5_H3K27me3_13_14_0.592_4.307386e-126 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.01595 0.930943 0.037574 0.015533 0.099532 0.65166 0.109278 0.13953 0.138035 0.028484 0.739274 0.094207 0.026791 0.03366 0.927244 0.012305 0.111856 0.617613 0.183102 0.087428 0.079919 0.804499 0.044467 0.071115 0.110216 0.016891 0.816811 0.056082 0.032498 0.890991 0.04253 0.03398 0.104385 0.822776 0.041243 0.031596 MOTIF Intestine_E14.5_H3K9ac_22_6_0.648_9.686226e-313 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.034806 0.857972 0.05797 0.049252 0.058976 0.801696 0.100483 0.038846 0.072447 0.048774 0.789203 0.089576 0.026358 0.047425 0.856305 0.069912 0.10012 0.673066 0.158612 0.068202 0.139748 0.643704 0.085978 0.13057 0.020832 0.041724 0.849999 0.087445 0.019539 0.834472 0.123655 0.022334 0.037171 0.794494 0.070068 0.098267 0.097333 0.405968 0.034049 0.462651 MOTIF Forebrain_E12.5_H3K4me2_15_50_0.652_0 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.180223 0.642696 0.177081 0.0 0.0 0.953462 0.029086 0.017452 0.017998 0.0 0.982002 0.0 0.347928 0.029304 0.432149 0.190619 0.005278 0.994722 0.0 0.0 0.03855 0.916916 0.0 0.044534 0.052586 0.0 0.709989 0.237425 0.0 0.911195 0.088805 0.0 MOTIF Kidney_P0_H3K4me2_7_31_0.666_0 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.014737 0.02695 0.958313 0.0 0.0 0.985514 0.0 0.014486 0.045139 0.035344 0.919517 0.0 0.022251 0.042652 0.918751 0.016347 0.028529 0.359978 0.075552 0.535941 0.036088 0.814604 0.091779 0.057529 0.022775 0.0 0.977225 0.0 0.0668 0.018675 0.856331 0.058195 MOTIF Cranio-Facial_E13.5_H3K9ac_28_54_0.583_2.163019e-320 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.059054 0.909567 0.021132 0.010247 0.057219 0.877741 0.019055 0.045985 0.0 0.024167 0.975833 0.0 0.318038 0.022906 0.623076 0.03598 0.118239 0.770472 0.096876 0.014412 0.0 0.919082 0.057427 0.02349 0.168785 0.070419 0.760796 0.0 0.016741 0.795185 0.033973 0.154101 0.791446 0.13647 0.0 0.072084 MOTIF Heart_E12.5_H3K9ac_38_4_0.558_2.051097e-186 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.0 0.927843 0.058129 0.014029 0.0 0.81843 0.174734 0.006835 0.236661 0.134529 0.040883 0.587927 0.066634 0.831522 0.042401 0.059443 0.229647 0.604368 0.056726 0.10926 0.01109 0.087314 0.879491 0.022105 0.016109 0.03793 0.928544 0.017417 0.106206 0.797091 0.026513 0.070189 0.182684 0.60613 0.05616 0.155027 0.025936 0.054037 0.874415 0.045611 0.027542 0.874947 0.02314 0.074371 MOTIF Heart_E13.5_H3K9ac_18_20_0.573_7.769083e-319 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.024561 0.011654 0.96124 0.002546 0.007548 0.956557 0.0 0.035894 0.034721 0.052076 0.782416 0.130786 0.069941 0.043267 0.835206 0.051586 0.236505 0.709775 0.03236 0.02136 0.0 0.814829 0.040567 0.144604 0.059659 0.006299 0.906761 0.027282 0.095471 0.03316 0.835824 0.035545 0.748236 0.013143 0.013984 0.224637 0.080163 0.735279 0.184558 0.0 MOTIF Kidney_E16.5_H3K9ac_24_22_0.583_5.697713e-319 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.03365 0.96635 0.0 0.063029 0.674985 0.0 0.261986 0.101579 0.042522 0.80703 0.048868 0.159256 0.040744 0.74819 0.051811 0.011788 0.82999 0.078389 0.079833 0.021566 0.781124 0.006786 0.190524 0.00701 0.0 0.981074 0.011916 0.004329 0.058128 0.916709 0.020834 0.68905 0.027981 0.041426 0.241542 0.218244 0.515678 0.266077 0.0 MOTIF Limb_E15.5_H3K9ac_24_20_0.624_4.915675e-258 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.015575 0.036588 0.947837 0.0 0.080728 0.753746 0.020973 0.144552 0.03037 0.020018 0.886413 0.063199 0.144472 0.027483 0.614754 0.213291 0.184296 0.73844 0.07368 0.003584 0.033944 0.853316 0.051839 0.060902 0.18739 0.046311 0.721891 0.044408 0.0 0.042914 0.945328 0.011758 0.914092 0.028988 0.02034 0.03658 0.179529 0.274025 0.546446 0.0