MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Kidney_E14.5_H3K9me3_39_168_0.526_2.059351e-28 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.761 0.001 0.237 0.001 0.997 0.001 0.001 0.001 0.851 0.001 0.147 0.156 0.709 0.001 0.134 0.001 0.921 0.001 0.077 0.92 0.001 0.001 0.078 0.001 0.189 0.001 0.809 0.775 0.001 0.223 0.001 0.038 0.001 0.96 0.001 0.105 0.001 0.748 0.146 0.072 0.756 0.001 0.171 0.158 0.171 0.001 0.67 MOTIF Intestine_E16.5_H3K9me3_67_164_0.522_1.704827e-18 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.022 0.942 0.001 0.035 0.001 0.836 0.013 0.15 0.001 0.883 0.001 0.115 0.001 0.937 0.001 0.061 0.986 0.012 0.001 0.001 0.016 0.183 0.001 0.8 0.965 0.001 0.008 0.026 0.001 0.001 0.997 0.001 0.001 0.001 0.971 0.027 0.012 0.986 0.001 0.001 0.001 0.035 0.013 0.951 0.005 0.984 0.001 0.01 MOTIF Heart_P0_H3K9me3_14_169_0.532_5.759995e-35 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.079 0.044 0.876 0.197 0.001 0.759 0.043 0.947 0.001 0.039 0.013 0.225 0.001 0.752 0.022 0.001 0.73 0.001 0.268 0.001 0.867 0.001 0.131 0.144 0.001 0.001 0.854 0.73 0.089 0.167 0.014 0.012 0.001 0.001 0.986 0.111 0.001 0.813 0.075 0.17 0.001 0.825 0.004 0.165 0.001 0.774 0.06 MOTIF Heart_E11.5_H3K9me3_64_167_0.516_2.580606e-21 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.103 0.617 0.001 0.279 0.001 0.854 0.001 0.144 0.257 0.65 0.001 0.092 0.001 0.71 0.001 0.288 0.902 0.001 0.001 0.096 0.001 0.327 0.001 0.671 0.956 0.001 0.042 0.001 0.126 0.001 0.866 0.007 0.139 0.008 0.852 0.001 0.001 0.926 0.001 0.072 0.001 0.163 0.042 0.794 0.046 0.628 0.001 0.325 MOTIF Heart_E16.5_H3K9me3_75_169_0.523_3.823144e-66 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.865 0.023 0.111 0.001 0.887 0.001 0.111 0.122 0.776 0.001 0.101 0.031 0.847 0.001 0.121 0.942 0.001 0.026 0.031 0.001 0.346 0.001 0.652 0.95 0.001 0.042 0.007 0.001 0.001 0.997 0.001 0.25 0.001 0.712 0.037 0.023 0.808 0.001 0.168 0.001 0.026 0.001 0.972 0.023 0.812 0.001 0.164 MOTIF Intestine_E14.5_H3K9me3_44_173_0.527_7.595157e-16 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.275 0.093 0.592 0.04 0.741 0.016 0.114 0.129 0.102 0.108 0.774 0.016 0.148 0.754 0.048 0.05 0.075 0.872 0.032 0.021 0.111 0.131 0.016 0.742 0.679 0.004 0.316 0.001 0.066 0.102 0.021 0.811 0.176 0.001 0.732 0.091 0.192 0.001 0.772 0.035 0.149 0.008 0.732 0.111 0.218 0.032 0.651 0.099 MOTIF Heart_E14.5_H3K9me3_68_171_0.520_4.872833e-52 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.069 0.03 0.036 0.865 0.096 0.027 0.864 0.013 0.876 0.009 0.069 0.046 0.09 0.049 0.814 0.047 0.024 0.756 0.065 0.155 0.024 0.899 0.025 0.052 0.032 0.12 0.023 0.825 0.769 0.022 0.125 0.084 0.04 0.022 0.106 0.832 0.134 0.001 0.831 0.034 0.124 0.007 0.822 0.047 0.109 0.013 0.848 0.03 MOTIF Liver_P0_H3K9me3_43_168_0.523_4.497487e-25 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.049 0.847 0.038 0.066 0.047 0.888 0.014 0.051 0.056 0.882 0.009 0.053 0.035 0.845 0.009 0.111 0.901 0.043 0.028 0.028 0.067 0.116 0.022 0.795 0.86 0.028 0.075 0.037 0.093 0.019 0.844 0.044 0.075 0.038 0.773 0.114 0.073 0.815 0.05 0.062 0.075 0.065 0.056 0.804 0.096 0.754 0.029 0.121 MOTIF Intestine_E16.5_H3K9me3_69_111_0.522_2.674821e-06 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.702701 0.003022 0.026652 0.267626 0.004784 0.050041 0.914118 0.031058 0.09111 0.785844 0.056582 0.066464 0.019768 0.92135 0.048574 0.010308 0.010557 0.04939 0.010846 0.929208 0.573759 0.156662 0.200276 0.069303 0.005167 0.011862 0.095202 0.887769 0.069467 0.012989 0.906091 0.011453 0.15001 0.005844 0.754375 0.089771 MOTIF Lung_E14.5_H3K9me3_30_178_0.524_7.658464e-10 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.316 0.001 0.682 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 MOTIF Limb_E12.5_H3K9me3_43_185_0.529_3.558201e-50 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.001 0.895 0.001 0.103 0.001 0.817 0.001 0.181 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.001 0.997 0.997 0.001 0.001 0.001 0.001 0.001 0.918 0.08 0.001 0.001 0.917 0.081 MOTIF Liver_E12.5_H3K9me3_15_175_0.528_9.42021e-34 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.142 0.856 0.001 0.001 0.001 0.001 0.001 0.997 0.997 0.001 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.156 0.001 0.842 0.001 MOTIF Midbrain_E14.5_H3K9me3_27_28_0.523_1.607802e-19 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.251717 0.621046 0.127238 0.0 0.0 0.8652 0.1348 0.0 0.061951 0.769821 0.012226 0.156002 0.031792 0.877306 0.005001 0.085901 0.0 0.964175 0.005684 0.030141 0.956886 0.0 0.043114 0.0 0.008515 0.024167 0.017914 0.949404 0.926777 0.003023 0.0702 0.0 0.0 0.007743 0.972286 0.01997 MOTIF Midbrain_E16.5_H3K9me3_40_40_0.521_1.082655e-18 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.999128 0.0 0.000872 0.080529 0.825249 0.006809 0.087413 0.020797 0.772431 0.02987 0.176903 0.039826 0.924211 0.013558 0.022404 0.915939 0.0 0.084061 0.0 0.02691 0.0 0.010713 0.962378 0.886968 0.004813 0.105786 0.002432 0.0 0.0 0.99803 0.00197 0.342102 0.0 0.654712 0.003186 MOTIF Neural-Tube_E11.5_H3K9me3_5_29_0.527_7.988982e-11 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.012046 0.982041 0.005913 0.0 0.028529 0.78468 0.112168 0.074623 0.016461 0.877098 0.043902 0.062539 0.045189 0.92197 0.008123 0.024719 0.807622 0.001744 0.190634 0.0 0.038037 0.035557 0.038301 0.888105 0.911965 0.03249 0.029858 0.025687 0.0 0.0 1.0 0.0 0.043304 0.027409 0.644317 0.28497 0.369285 0.054388 0.110193 0.466134 MOTIF Hindbrain_E11.5_H3K9me3_4_174_0.539_4.535245e-08 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.782 0.001 0.216 0.001 0.803 0.001 0.195 0.151 0.799 0.049 0.001 0.997 0.001 0.001 0.001 0.04 0.161 0.144 0.655 0.776 0.001 0.12 0.103 0.061 0.038 0.72 0.181 0.147 0.197 0.507 0.149 0.696 0.302 0.001 0.001 0.306 0.108 0.001 0.585 MOTIF Limb_E12.5_H3K9me3_33_19_0.532_5.197088e-67 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.027434 0.69848 0.065596 0.20849 0.010051 0.923471 0.004893 0.061584 0.022072 0.894571 0.011928 0.071428 0.01924 0.922101 0.003451 0.055209 0.904047 0.0 0.095953 0.0 0.005264 0.021943 0.192833 0.779959 0.863909 0.010065 0.126026 0.0 0.0 0.006008 0.969927 0.024065 0.043522 0.024412 0.897886 0.03418 0.411969 0.578179 0.007199 0.002653 MOTIF Liver_P0_H3K9me3_21_63_0.534_2.167419e-19 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.049691 0.737045 0.010602 0.202663 0.117229 0.802198 0.03941 0.041163 0.001434 0.901598 0.001988 0.09498 0.888159 0.056636 0.047651 0.007553 0.06076 0.132241 0.195779 0.611221 0.815817 0.0085 0.158315 0.017368 0.015073 0.010202 0.961725 0.013 0.021555 0.028748 0.895875 0.053821 0.179645 0.771298 0.039271 0.009785 MOTIF Lung_P0_H3K9me3_86_68_0.506_0.02677809 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.035911 0.884177 0.02012 0.059792 0.073862 0.810438 0.046709 0.06899 0.03508 0.851821 0.011241 0.101857 0.873998 0.046437 0.054314 0.025251 0.053415 0.026804 0.351418 0.568363 0.808422 0.01595 0.146681 0.028946 0.01141 0.070508 0.913005 0.005077 0.148408 0.089043 0.703259 0.05929 0.078439 0.892025 0.012047 0.017489 0.227208 0.573804 0.181025 0.017963 MOTIF Midbrain_P0_H3K9me3_9_81_0.537_3.028777e-17 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.061643 0.88857 0.020798 0.028988 0.071055 0.758145 0.022107 0.148693 0.035611 0.796629 0.0 0.167761 0.886809 0.0 0.113191 0.0 0.004281 0.02442 0.042891 0.928408 0.635625 0.003979 0.360397 0.0 0.062766 0.002965 0.894544 0.039725 0.292677 0.047291 0.655256 0.004776 0.911847 0.087553 0.0006 0.0 MOTIF Forebrain_E11.5_H3K9me3_8_75_0.541_2.412902e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.015136 0.654433 0.011919 0.318512 0.008735 0.682749 0.047357 0.261159 0.039377 0.896625 0.029293 0.034704 0.0 0.989354 0.003088 0.007558 0.976804 0.013887 0.009309 0.0 0.042283 0.20161 0.047664 0.708442 0.88441 0.02165 0.081662 0.012278 0.002997 0.017632 0.957393 0.021978 0.056286 0.043254 0.666505 0.233955 MOTIF Cranio-Facial_E12.5_H3K9me3_42_120_0.521_8.918446e-15 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.333488 0.446439 0.220074 0.232183 0.615293 0.031468 0.121056 0.026847 0.887055 0.018081 0.068017 0.063582 0.814207 0.059916 0.062295 0.015519 0.949483 0.00569 0.029307 0.872889 0.0 0.127111 0.0 0.078098 0.038142 0.037493 0.846267 0.836012 0.014552 0.140192 0.009244 0.013958 0.0 0.949209 0.036832 0.257515 0.012178 0.722631 0.007676 MOTIF Midbrain_E15.5_H3K9me3_60_48_0.522_3.742626e-25 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.112377 0.527193 0.02114 0.33929 0.049147 0.911292 0.006787 0.032774 0.205702 0.702625 0.018026 0.073647 0.010644 0.797249 0.001827 0.19028 0.960825 0.0 0.036828 0.002347 0.036626 0.077741 0.087076 0.798558 0.888176 0.000539 0.111285 0.0 0.013266 0.002829 0.983905 0.0 0.251197 0.013314 0.69129 0.0442 MOTIF Hindbrain_E12.5_H3K9me3_13_49_0.536_3.18902e-66 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.007953 0.636335 0.139207 0.216505 0.033752 0.739563 0.001532 0.225154 0.020352 0.889017 0.010229 0.080402 0.022298 0.928378 0.003296 0.046028 0.924505 0.0 0.075495 0.0 0.0 0.152758 0.012583 0.83466 0.905155 0.005025 0.08982 0.0 0.003797 0.014169 0.93201 0.050024 0.149246 0.023537 0.807632 0.019585 0.448541 0.391414 0.012028 0.148018 MOTIF Heart_E12.5_H3K9me3_24_68_0.542_1.343839e-184 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.04403 0.788768 0.062052 0.10515 0.02516 0.877885 0.006221 0.090734 0.043024 0.788738 0.00688 0.161358 0.051476 0.904662 0.003862 0.04 0.945425 0.000641 0.053751 0.000183 0.029745 0.247788 0.091942 0.630525 0.826027 0.00855 0.165422 0.0 0.013036 0.018206 0.947425 0.021333 0.239146 0.00809 0.689727 0.063037 0.755383 0.202657 0.015475 0.026484 MOTIF Liver_E12.5_H3K9me3_17_96_0.526_4.084502e-36 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.047439 0.805334 0.088334 0.058893 0.057342 0.876667 0.011633 0.054358 0.114503 0.825705 0.008342 0.05145 0.00971 0.96923 0.001052 0.020009 0.942927 0.0 0.057073 0.0 0.029145 0.33952 0.021317 0.610019 0.836451 0.005354 0.155413 0.002783 0.0 0.030817 0.952984 0.016199 0.271408 0.032522 0.616453 0.079617 MOTIF Liver_E13.5_H3K9me3_6_45_0.532_2.466342e-30 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.051811 0.756803 0.163338 0.028048 0.052882 0.900995 0.002644 0.043479 0.046799 0.909866 0.005411 0.037925 0.008868 0.955979 0.006893 0.02826 0.881297 0.003164 0.115538 0.0 0.055693 0.280127 0.056791 0.607389 0.790579 0.005983 0.203438 0.0 0.001141 0.010904 0.975324 0.012631 0.268973 0.004547 0.669991 0.056488 0.721585 0.256113 0.004609 0.017694 MOTIF Forebrain_E13.5_H3K9me3_35_56_0.528_1.930513e-42 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.133715 0.655272 0.029575 0.181437 0.02066 0.879993 0.00206 0.097287 0.016787 0.885625 0.011824 0.085763 0.0 0.972603 0.001297 0.0261 0.957672 0.0 0.042328 0.0 0.026594 0.363288 0.035418 0.5747 0.930288 0.006904 0.062808 0.0 0.00379 0.016392 0.955605 0.024213 0.261968 0.026368 0.661956 0.049707 MOTIF Limb_E13.5_H3K9me3_50_64_0.527_4.918672e-53 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.062412 0.777305 0.051638 0.108645 0.0503 0.829314 0.004351 0.116035 0.02728 0.892394 0.011079 0.069246 0.008414 0.969512 0.000275 0.021799 0.933184 0.001137 0.065679 0.0 0.0215 0.247212 0.068341 0.662947 0.927059 0.007701 0.06524 0.0 0.003313 0.005164 0.932379 0.059144 0.315925 0.092465 0.551782 0.039828 MOTIF Midbrain_E13.5_H3K9me3_28_30_0.531_3.122732e-43 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.177967 0.627209 0.045607 0.149217 0.027658 0.872316 0.010384 0.089643 0.037531 0.83846 0.003664 0.120344 0.0 0.979321 0.002939 0.01774 0.962262 0.0 0.037738 0.0 0.029398 0.225982 0.045861 0.698759 0.910019 0.001279 0.088702 0.0 0.021661 0.000114 0.933274 0.044951 0.229646 0.012216 0.743863 0.014275 0.696383 0.303617 0.0 0.0 MOTIF Forebrain_E12.5_H3K9me3_38_42_0.525_1.409258e-47 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.039964 0.883742 0.045033 0.031261 0.056219 0.843965 0.006673 0.093143 0.087513 0.810833 0.01735 0.084304 0.012529 0.966309 0.002772 0.01839 0.961171 0.000126 0.038704 0.0 0.028297 0.37145 0.219504 0.380749 0.844398 0.006315 0.123633 0.025655 0.003691 0.012787 0.974181 0.009341 0.232411 0.059237 0.682229 0.026122 0.716328 0.254329 0.011363 0.01798 MOTIF Neural-Tube_E12.5_H3K9me3_37_60_0.527_1.243847e-51 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.012272 0.769062 0.143775 0.074891 0.020809 0.932682 0.002545 0.043965 0.045713 0.79548 0.065906 0.092902 0.014255 0.950233 0.001122 0.03439 0.950076 0.000183 0.04628 0.003461 0.018356 0.115215 0.264498 0.60193 0.853371 0.012759 0.121608 0.012261 0.006899 0.030864 0.958237 0.004 0.365506 0.06575 0.557158 0.011585 0.636126 0.203415 0.0 0.160459 MOTIF Neural-Tube_E12.5_H3K9me3_2_176_0.550_1.099646e-81 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.296 0.503 0.097 0.104 0.293 0.658 0.001 0.048 0.001 0.597 0.001 0.401 0.001 0.719 0.001 0.279 0.201 0.797 0.001 0.001 0.995 0.003 0.001 0.001 0.001 0.16 0.001 0.838 0.902 0.001 0.077 0.02 0.192 0.001 0.806 0.001 0.39 0.001 0.49 0.119 MOTIF Stomach_E16.5_H3K9me3_23_177_0.535_1.20548e-27 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.11 0.067 0.774 0.049 0.086 0.628 0.001 0.285 0.001 0.975 0.008 0.016 0.12 0.214 0.001 0.665 0.708 0.001 0.273 0.018 0.001 0.032 0.009 0.958 0.309 0.003 0.435 0.253 0.102 0.001 0.855 0.042 0.437 0.005 0.557 0.001 0.09 0.094 0.701 0.115