MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Midbrain_E16.5_H3K4me1_47_60_0.521_1.523221e-27 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.124316 0.538034 0.33765 0.0 0.046352 0.021101 0.880692 0.051855 0.21626 0.016079 0.647069 0.120592 0.131952 0.241407 0.603643 0.022997 0.082467 0.805283 0.063919 0.04833 0.031443 0.634993 0.317098 0.016466 0.087327 0.157463 0.152855 0.602354 0.024039 0.094597 0.865812 0.015552 0.010741 0.025773 0.063452 0.900034 0.018039 0.056582 0.060935 0.864444 0.046321 0.049374 0.022037 0.882268 0.047564 0.809079 0.005183 0.138174 MOTIF Stomach_E16.5_H3K4me1_35_70_0.522_1.683184e-40 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.463469 0.03723 0.399265 0.100036 0.099587 0.16378 0.731198 0.005436 0.043977 0.883226 0.046573 0.026224 0.027784 0.656312 0.283765 0.032139 0.010177 0.040302 0.096757 0.852764 0.001265 0.027049 0.948024 0.023663 0.019916 0.105062 0.170396 0.704625 0.010058 0.020421 0.183454 0.786067 0.045247 0.027109 0.005896 0.921749 0.11436 0.695335 0.049717 0.140588 0.093891 0.820997 0.001812 0.083301 MOTIF Heart_E12.5_H3K4me1_23_168_0.524_7.85114e-79 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.065 0.122 0.083 0.73 0.125 0.087 0.727 0.061 0.053 0.024 0.01 0.913 0.016 0.012 0.019 0.953 0.061 0.023 0.032 0.884 0.055 0.693 0.074 0.178 0.09 0.706 0.033 0.171 0.287 0.159 0.394 0.16 MOTIF Heart_P0_H3K4me1_9_159_0.529_1.299228e-54 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.329 0.277 0.109 0.285 0.248 0.026 0.613 0.113 0.116 0.209 0.529 0.146 0.721 0.063 0.174 0.042 0.908 0.069 0.022 0.001 0.833 0.037 0.054 0.076 0.076 0.623 0.057 0.244 0.772 0.056 0.05 0.122 0.091 0.138 0.655 0.116 0.001 0.33 0.146 0.523 MOTIF Lung_E16.5_H3K4me1_22_50_0.525_5.302037e-59 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.068744 0.061623 0.869633 0.0 0.063566 0.856018 0.028844 0.051572 0.020765 0.354677 0.222647 0.401911 0.108205 0.116842 0.737193 0.03776 0.01697 0.027257 0.017631 0.938142 0.00805 0.022805 0.037809 0.931336 0.009804 0.024155 0.002724 0.963316 0.186592 0.729699 0.022696 0.061012 0.0 0.973471 0.0 0.026529 0.558312 0.345001 0.047649 0.049039 0.0727 0.392111 0.313768 0.221422 0.733153 0.006329 0.013823 0.246694 MOTIF Forebrain_E11.5_H3K4me1_19_56_0.540_9.876534e-95 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.061601 0.100733 0.828712 0.008954 0.028137 0.880059 0.070844 0.020959 0.048407 0.152934 0.266229 0.53243 0.036545 0.093209 0.837791 0.032455 0.005947 0.024431 0.049646 0.919976 0.033453 0.033718 0.017768 0.915061 0.062131 0.053417 0.014748 0.869704 0.101519 0.805573 0.009985 0.082924 0.010424 0.925229 0.00689 0.057456 0.085737 0.269151 0.216326 0.428786 0.417116 0.254034 0.254547 0.074302 0.356812 0.028464 0.299312 0.315411 MOTIF Forebrain_E15.5_H3K4me1_46_81_0.525_1.856225e-60 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.347269 0.128088 0.496183 0.02846 0.039711 0.713932 0.234671 0.011686 0.061866 0.310765 0.026737 0.600632 0.064282 0.038424 0.890453 0.006841 0.009095 0.047284 0.025979 0.917642 0.063388 0.045151 0.030633 0.860827 0.074315 0.029427 0.0 0.896258 0.11216 0.849339 0.007287 0.031214 0.016776 0.82245 0.0 0.160774 0.1036 0.696757 0.109323 0.090319 0.315181 0.092291 0.562893 0.029635 0.237112 0.0 0.50132 0.261568 MOTIF Hindbrain_E13.5_H3K4me1_60_103_0.515_8.164518e-37 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.773815 0.220113 0.006072 0.21927 0.072453 0.041431 0.666845 0.012437 0.037333 0.921587 0.028643 0.026069 0.010886 0.00427 0.958775 0.059656 0.0 0.087296 0.853048 0.057369 0.037616 0.0 0.905015 0.162491 0.812547 0.002645 0.022317 0.026334 0.95707 0.0 0.016596 0.060239 0.551644 0.201708 0.18641 0.143696 0.212965 0.255021 0.388319 MOTIF Intestine_E15.5_H3K4me1_47_123_0.522_2.008258e-34 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.001106 0.721722 0.253209 0.023963 0.004563 0.080811 0.197343 0.717283 0.014359 0.039714 0.935504 0.010423 0.007942 0.025637 0.089005 0.877415 0.01305 0.012933 0.048005 0.926011 0.013731 0.035741 0.0 0.950528 0.271168 0.675554 0.043512 0.009765 0.006711 0.849576 0.0 0.143713 0.104425 0.71919 0.114057 0.062329 MOTIF Intestine_E16.5_H3K4me1_33_99_0.521_3.780102e-30 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.122782 0.052062 0.787458 0.037698 0.029029 0.796658 0.15294 0.021373 0.02173 0.13327 0.139585 0.705415 0.042651 0.082235 0.835966 0.039148 0.00206 0.053003 0.005257 0.939681 0.060155 0.132008 0.011611 0.796226 0.019015 0.017916 0.010498 0.952572 0.121712 0.677451 0.042329 0.158509 0.02048 0.927214 0.005121 0.047185 0.184963 0.518884 0.058954 0.2372 0.101198 0.631194 0.060743 0.206865 MOTIF Limb_E12.5_H3K4me1_9_109_0.537_1.60387e-133 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.08381 0.068781 0.705641 0.141768 0.053787 0.826155 0.114768 0.00529 0.175884 0.092259 0.09525 0.636607 0.024398 0.062556 0.889964 0.023082 0.016279 0.036257 0.025502 0.921962 0.052231 0.030221 0.057295 0.860253 0.055869 0.029228 0.008131 0.906772 0.098335 0.737933 0.031677 0.132055 0.052216 0.814529 0.00205 0.131205 MOTIF Kidney_P0_H3K4me1_25_96_0.526_1.097183e-34 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.069517 0.087111 0.825564 0.017809 0.020501 0.737841 0.229771 0.011886 0.015614 0.22011 0.051477 0.712799 0.087167 0.068493 0.81606 0.02828 0.004595 0.032788 0.014632 0.947985 0.067261 0.09366 0.057979 0.781099 0.105284 0.069417 0.00982 0.81548 0.101074 0.772679 0.016214 0.110033 0.018015 0.959361 0.013442 0.009181 0.545669 0.271864 0.106385 0.076081 MOTIF Midbrain_E12.5_H3K4me1_33_111_0.527_2.41702e-58 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.058437 0.209504 0.732059 0.0 0.014542 0.856103 0.118217 0.011138 0.160433 0.102582 0.056274 0.680711 0.039548 0.064489 0.869241 0.026721 0.019899 0.010285 0.013602 0.956214 0.039214 0.05038 0.0409 0.869506 0.095751 0.073623 0.021852 0.808774 0.089945 0.740647 0.029003 0.140405 0.027223 0.924656 0.00314 0.044981 MOTIF Kidney_E14.5_H3K4me1_47_58_0.518_9.789713e-27 letter-probability matrix: alength= 4 w= 13 nsites= 100 E= 1.0e-1 0.12948 0.140365 0.730155 0.0 0.026959 0.374088 0.446141 0.152813 0.108284 0.413554 0.190863 0.2873 0.178842 0.519527 0.143535 0.158095 0.645075 0.082936 0.208504 0.063486 0.038614 0.004596 0.948979 0.00781 0.096402 0.082562 0.739579 0.081457 0.871247 0.047191 0.043554 0.038008 0.677645 0.270232 0.030723 0.021399 0.907418 0.043674 0.041695 0.007212 0.003968 0.965936 0.025995 0.004101 0.767227 0.05197 0.053345 0.127458 0.001901 0.029836 0.96436 0.003903 MOTIF Heart_P0_H3K4me1_73_49_0.501_2.532218e-06 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.038721 0.154969 0.137823 0.668487 0.029047 0.239904 0.697095 0.033954 0.10896 0.200317 0.52984 0.160882 0.708288 0.038917 0.229015 0.02378 0.041781 0.006437 0.946219 0.005563 0.114108 0.055349 0.774059 0.056483 0.834613 0.06107 0.038733 0.065584 0.558178 0.327084 0.071492 0.043246 0.888897 0.034058 0.059091 0.017953 0.019793 0.945089 0.028052 0.007066 0.803232 0.017268 0.036694 0.142806 0.005144 0.027912 0.965047 0.001897 MOTIF Midbrain_P0_H3K4me1_44_60_0.524_4.043957e-25 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.004955 0.416276 0.140316 0.438452 0.009432 0.247837 0.204374 0.538357 0.698286 0.136185 0.058995 0.106534 0.04223 0.004486 0.944638 0.008646 0.05316 0.026679 0.870117 0.050044 0.813509 0.030138 0.071613 0.08474 0.909569 0.070062 0.010995 0.009373 0.839503 0.14355 0.011393 0.005554 0.013056 0.910561 0.02252 0.053863 0.611066 0.048447 0.294298 0.04619 0.0 0.035569 0.947092 0.017339 MOTIF Midbrain_E11.5_H3K4me1_35_66_0.524_8.416403e-39 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.0 0.924919 0.032186 0.042895 0.087811 0.56644 0.202552 0.143197 0.080699 0.535977 0.228131 0.155193 0.757486 0.037027 0.139942 0.065545 0.024556 0.001758 0.959406 0.014281 0.090728 0.014388 0.82184 0.073044 0.91827 0.00683 0.030878 0.044022 0.875248 0.08244 0.035846 0.006465 0.91224 0.038241 0.024506 0.025012 0.052747 0.885882 0.033364 0.028006 0.475028 0.224893 0.177169 0.12291 0.020583 0.040974 0.920841 0.017603 MOTIF Neural-Tube_E14.5_H3K4me1_61_69_0.513_7.044486e-19 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.221653 0.285592 0.320133 0.172621 0.028791 0.228695 0.320179 0.422335 0.560206 0.071148 0.289924 0.078722 0.038731 0.037442 0.899296 0.024531 0.115338 0.023954 0.767226 0.093481 0.887555 0.038182 0.015464 0.058799 0.649792 0.332106 0.004453 0.013648 0.917438 0.037182 0.030212 0.015167 0.02159 0.948539 0.018708 0.011163 0.710315 0.05024 0.169304 0.070141 0.016694 0.048769 0.921901 0.012635 0.0 0.19212 0.55022 0.25766 MOTIF Midbrain_E14.5_H3K4me1_73_78_0.509_2.118672e-22 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.40017 0.57991 0.0 0.019919 0.158201 0.349684 0.492115 0.0 0.593239 0.093337 0.286075 0.02735 0.036251 0.016299 0.928673 0.018778 0.052799 0.041904 0.797931 0.107367 0.857815 0.010652 0.02843 0.103102 0.554185 0.409211 0.024792 0.011813 0.929668 0.031105 0.014182 0.025045 0.043587 0.953055 0.0 0.003359 0.815324 0.039666 0.050788 0.094222 0.003747 0.038917 0.953124 0.004212 MOTIF Forebrain_E13.5_H3K4me1_80_76_0.507_2.580441e-33 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.747151 0.058994 0.13113 0.062725 0.087183 0.005566 0.878892 0.028359 0.033944 0.03476 0.841994 0.089302 0.882267 0.00041 0.039827 0.077497 0.65078 0.299899 0.040838 0.008484 0.960133 0.016481 0.005315 0.018072 0.032826 0.922903 0.025011 0.01926 0.647591 0.037697 0.181144 0.133568 0.017918 0.204066 0.769713 0.008302 0.064419 0.264163 0.370159 0.301259 0.004647 0.125339 0.752922 0.117092 MOTIF Cranio-Facial_E15.5_H3K4me1_42_84_0.521_5.806216e-45 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.501391 0.242249 0.105639 0.150721 0.736564 0.117813 0.084901 0.060722 0.027802 0.006708 0.956931 0.008558 0.169928 0.038228 0.738001 0.053844 0.656464 0.003133 0.292095 0.048308 0.878021 0.060423 0.051303 0.010253 0.861075 0.062334 0.071749 0.004841 0.030328 0.908159 0.027338 0.034176 0.731635 0.045825 0.190667 0.031873 0.002551 0.126253 0.855514 0.015683 MOTIF Heart_E13.5_H3K4me1_65_76_0.510_5.164011e-25 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.277194 0.36716 0.309559 0.046087 0.099427 0.394102 0.44293 0.06354 0.777218 0.045035 0.141156 0.036591 0.054538 0.007731 0.92933 0.008402 0.173093 0.019347 0.760904 0.046656 0.750483 0.040346 0.15578 0.053391 0.718907 0.190137 0.061979 0.028977 0.812604 0.128659 0.043584 0.015153 0.018863 0.926725 0.046885 0.007528 0.788995 0.031043 0.043218 0.136743 0.002383 0.094241 0.888368 0.015008 MOTIF Stomach_E14.5_H3K4me1_29_81_0.524_6.085215e-40 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.134051 0.636194 0.214038 0.015716 0.725995 0.055283 0.171398 0.047324 0.060752 0.001983 0.927776 0.009489 0.108581 0.082819 0.689764 0.118836 0.894525 0.009794 0.060625 0.035055 0.866553 0.064981 0.050311 0.018155 0.764501 0.126377 0.097749 0.011374 0.008204 0.935387 0.039046 0.017364 0.787904 0.036206 0.053971 0.121919 0.011992 0.150348 0.825394 0.012266 0.201775 0.394821 0.175715 0.227689 MOTIF Hindbrain_P0_H3K4me1_44_108_0.522_4.811422e-30 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.755847 0.112908 0.062772 0.068474 0.003886 0.001875 0.987377 0.006862 0.040275 0.02396 0.830149 0.105616 0.818817 0.002279 0.030815 0.148089 0.756386 0.1107 0.099142 0.033773 0.937686 0.052103 0.005467 0.004745 0.028478 0.914123 0.013611 0.043788 0.652551 0.044687 0.293786 0.008976 0.014662 0.225137 0.740905 0.019296 MOTIF Hindbrain_E15.5_H3K4me1_59_88_0.518_7.088937e-47 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.634105 0.047847 0.271153 0.046896 0.022232 0.00489 0.950119 0.022759 0.101512 0.051963 0.753244 0.093282 0.879705 0.007967 0.043359 0.068969 0.784189 0.174919 0.027627 0.013266 0.932129 0.052865 0.001809 0.013197 0.038217 0.876547 0.054871 0.030365 0.696471 0.039444 0.220594 0.043492 0.009023 0.137987 0.844598 0.008391 0.017583 0.535881 0.234774 0.211762 MOTIF Lung_E14.5_H3K4me1_36_70_0.520_3.222827e-24 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.228476 0.301967 0.276824 0.192733 0.752113 0.053157 0.122451 0.072279 0.062665 0.001756 0.930698 0.004881 0.161541 0.015674 0.693316 0.129469 0.897584 0.012949 0.050021 0.039445 0.818372 0.0892 0.080154 0.012273 0.863787 0.089203 0.04308 0.00393 0.021731 0.899057 0.036457 0.042754 0.659484 0.023416 0.166498 0.150602 0.010926 0.112586 0.863303 0.013185 MOTIF Limb_E11.5_H3K4me1_34_70_0.525_5.996377e-44 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.660711 0.04821 0.210454 0.080625 0.037003 0.011299 0.935822 0.015876 0.133962 0.048835 0.758786 0.058418 0.89925 0.016856 0.059842 0.024052 0.697022 0.225582 0.074499 0.002897 0.903524 0.058811 0.023002 0.014663 0.0218 0.894182 0.055202 0.028816 0.6494 0.139636 0.155009 0.055955 0.022289 0.106683 0.85628 0.014748 MOTIF Limb_E13.5_H3K4me1_62_70_0.516_4.120091e-45 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.83114 0.05309 0.061469 0.054301 0.026394 0.008548 0.950504 0.014554 0.171445 0.020572 0.756604 0.051379 0.853169 0.0366 0.061105 0.049126 0.722436 0.205583 0.062532 0.009449 0.843363 0.091863 0.049528 0.015246 0.040348 0.891813 0.036654 0.031184 0.693518 0.103663 0.161417 0.041402 0.006144 0.102787 0.869368 0.021701 MOTIF Heart_E16.5_H3K4me1_47_91_0.514_3.573457e-32 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.708964 0.042662 0.208746 0.039628 0.071332 0.007431 0.911499 0.009738 0.189731 0.026511 0.719904 0.063855 0.836674 0.02235 0.054803 0.086174 0.673359 0.268091 0.041115 0.017435 0.891375 0.030949 0.062711 0.014965 0.022212 0.897299 0.046708 0.033781 0.75921 0.01904 0.166287 0.055463 0.00212 0.116233 0.877998 0.003649 MOTIF Intestine_P0_H3K4me1_27_103_0.518_1.113774e-12 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.708416 0.037275 0.210122 0.044188 0.027006 0.007408 0.955424 0.010162 0.164682 0.071627 0.640143 0.123547 0.859342 0.043747 0.066853 0.030058 0.685362 0.226179 0.05204 0.036419 0.855111 0.063182 0.04311 0.038597 0.010724 0.957047 0.027928 0.004302 0.847777 0.024212 0.053148 0.074863 0.006984 0.14001 0.844591 0.008414 MOTIF Limb_E14.5_H3K4me1_45_68_0.515_4.04452e-22 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.084476 0.378926 0.400161 0.136438 0.569384 0.047082 0.248828 0.134707 0.062302 0.005589 0.918455 0.013654 0.164075 0.029276 0.752609 0.054039 0.878744 0.007817 0.076373 0.037067 0.780367 0.150314 0.058818 0.010502 0.846376 0.103546 0.036378 0.013699 0.042081 0.898224 0.042013 0.017682 0.788244 0.035454 0.130501 0.045802 0.002045 0.107223 0.879995 0.010737 MOTIF Midbrain_E16.5_H3K4me1_59_110_0.515_5.285259e-37 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.75548 0.082288 0.10867 0.053563 0.08282 0.005628 0.884393 0.027159 0.064448 0.066741 0.767776 0.101036 0.849571 0.013347 0.069471 0.067611 0.797663 0.180305 0.013646 0.008386 0.941292 0.01959 0.025987 0.013132 0.054656 0.874696 0.033291 0.037357 0.659093 0.024045 0.20893 0.107933 0.014509 0.033944 0.944165 0.007381 MOTIF Lung_E15.5_H3K4me1_28_91_0.525_1.154437e-52 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.682875 0.063652 0.195585 0.057888 0.079977 0.003262 0.9086 0.008162 0.154033 0.112684 0.613904 0.119379 0.892974 0.011467 0.080451 0.015108 0.825301 0.081146 0.055472 0.038081 0.895244 0.028851 0.074526 0.00138 0.014219 0.922134 0.035069 0.028578 0.761876 0.026283 0.17472 0.037121 0.024957 0.127503 0.832747 0.014793 MOTIF Stomach_E16.5_H3K4me1_24_83_0.526_2.803703e-41 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.659238 0.052554 0.23355 0.054658 0.049518 0.003286 0.93562 0.011576 0.119519 0.100342 0.671072 0.109067 0.920106 0.009801 0.065188 0.004906 0.891102 0.072198 0.027993 0.008708 0.825477 0.07405 0.077831 0.022642 0.005526 0.896244 0.073979 0.02425 0.681296 0.087804 0.145314 0.085586 0.020846 0.106518 0.86158 0.011055