MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Cranio-Facial_E15.5_H3K4me2_46_50_0.598_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.008474	0.044907	0.418586	0.528033
0.0	0.888153	0.00818	0.103668
0.193519	0.731187	0.046543	0.02875
0.147923	0.791322	0.03177	0.028985
0.013834	0.946045	0.040121	0.0
0.070505	0.087336	0.030933	0.811226
0.008917	0.969824	0.021259	0.0
0.025689	0.0	0.921673	0.052638
0.0	0.846177	0.153823	0.0
0.0	0.0	0.529287	0.470713

MOTIF	Cranio-Facial_E13.5_H3K4me3_53_71_0.604_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.044505	0.616091	0.339403
0.0	0.901434	0.048016	0.05055
0.019257	0.847353	0.057546	0.075844
0.255939	0.537567	0.017386	0.189108
0.092745	0.845034	0.036661	0.025561
0.113035	0.0	0.0	0.886965
0.0	0.956039	0.039148	0.004813
0.014251	0.0	0.955103	0.030646
0.0	0.983128	0.016872	0.0

MOTIF	Intestine_E14.5_H3K4me3_45_50_0.633_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.050054	0.803386	0.14656
0.145085	0.663292	0.0	0.191623
0.084915	0.863763	0.019572	0.03175
0.231602	0.717705	0.032792	0.017902
0.015754	0.949895	0.034351	0.0
0.289247	0.078041	0.076038	0.556674
0.004248	0.969415	0.026336	0.0
0.055093	0.018745	0.895945	0.030216
0.0	0.917731	0.066859	0.01541

MOTIF	Limb_E12.5_H3K4me3_71_54_0.574_3.728079e-151
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.098001	0.856636	0.045364
0.087169	0.75819	0.040095	0.114546
0.209614	0.633219	0.05811	0.099057
0.100267	0.796874	0.053629	0.04923
0.031438	0.935356	0.033206	0.0
0.214629	0.021715	0.0	0.763656
0.005187	0.934772	0.06004	0.0
0.101102	0.007135	0.855819	0.035944
0.0	0.955617	0.037811	0.006572
0.130036	0.486282	0.030246	0.353436

MOTIF	Heart_P0_H3K4me3_64_83_0.582_3.162902e-236
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.0	1.0	0.0
0.742289	0.0	0.111116	0.146595
0.054515	0.023055	0.914422	0.008008
0.028695	0.036142	0.91701	0.018153
0.063547	0.107734	0.481935	0.346784
0.031019	0.0	0.871936	0.097045
0.243527	0.727812	0.028661	0.0
0.009799	0.033418	0.92887	0.027913
0.171058	0.78096	0.047982	0.0

MOTIF	Hindbrain_E16.5_H3K4me3_29_40_0.654_1.263058e-314
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.046976	0.953024	0.0
0.932974	0.0	0.032307	0.034718
0.020744	0.109215	0.85977	0.010271
0.383309	0.024501	0.575379	0.01681
0.232444	0.059326	0.556119	0.152111
0.066245	0.076797	0.764806	0.092152
0.06446	0.869547	0.05273	0.013263
0.002319	0.0	0.994209	0.003472
0.091965	0.845277	0.041657	0.021101
0.187658	0.372364	0.401059	0.038919

MOTIF	Midbrain_E16.5_H3K4me3_42_60_0.636_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.023512	0.023339	0.942608	0.01054
0.883481	0.0	0.036771	0.079748
0.019454	0.036294	0.940075	0.004178
0.249026	0.010372	0.597149	0.143453
0.027272	0.062862	0.830147	0.079718
0.269962	0.012881	0.658048	0.059109
0.038457	0.924166	0.012829	0.024548
0.01692	0.018707	0.964373	0.0
0.08918	0.727499	0.050148	0.133173

MOTIF	Forebrain_E16.5_H3K4me3_46_18_0.609_1.112427e-254
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.157315	0.708745	0.110627	0.023313
0.015622	0.055188	0.910119	0.019071
0.856544	0.01094	0.086515	0.046002
0.007336	0.130354	0.810941	0.051368
0.299788	0.085701	0.509907	0.104604
0.121224	0.052555	0.800418	0.025803
0.010312	0.041748	0.914622	0.033318
0.192445	0.753432	0.038281	0.015842
0.0	0.021114	0.976248	0.002637
0.831923	0.120937	0.0	0.047139
0.0	0.541821	0.458179	0.0

MOTIF	Kidney_E14.5_H3K4me3_22_41_0.691_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.04062	0.871019	0.063002	0.025359
0.0	0.017526	0.941722	0.040752
0.793609	0.0	0.145611	0.06078
0.0	0.013759	0.76777	0.218471
0.035935	0.0	0.655363	0.308703
0.0	0.053968	0.75572	0.190312
0.013323	0.008589	0.813597	0.164491
0.10378	0.847346	0.0276	0.021274
0.014069	0.016307	0.961125	0.008499

MOTIF	Liver_E14.5_H3K4me3_25_36_0.656_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.204773	0.685856	0.088172	0.021198
0.023811	0.103989	0.865718	0.006482
0.838306	0.04514	0.056391	0.060163
0.021369	0.006601	0.852351	0.119679
0.034491	0.093819	0.621005	0.250685
0.0	0.069098	0.930902	0.0
0.244632	0.0	0.632865	0.122503
0.028629	0.90843	0.054905	0.008037
0.0	0.0	1.0	0.0

MOTIF	Lung_E14.5_H3K4me3_22_39_0.683_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.253537	0.659834	0.072494	0.014134
0.0	0.059114	0.922326	0.01856
0.853552	0.062221	0.034634	0.049593
0.009825	0.027481	0.862677	0.100017
0.047271	0.062839	0.72474	0.165149
0.005912	0.0585	0.761994	0.173594
0.12082	0.00936	0.69466	0.175161
0.089448	0.857085	0.041818	0.011649
0.028168	0.017476	0.935466	0.01889

MOTIF	Lung_E15.5_H3K4me3_10_27_0.719_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.131235	0.826535	0.016958	0.025272
0.030544	0.04959	0.903787	0.016078
0.815529	0.038733	0.076828	0.068909
0.024582	0.01503	0.943262	0.017126
0.052081	0.300855	0.530977	0.116087
0.020473	0.063537	0.805834	0.110156
0.177967	0.020537	0.675571	0.125925
0.02544	0.926699	0.023256	0.024605
0.014322	0.009028	0.944265	0.032386

MOTIF	Hindbrain_P0_H3K4me3_27_43_0.682_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.218552	0.743122	0.018595	0.019731
0.0	0.138492	0.806156	0.055352
0.737891	0.031767	0.045073	0.185268
0.014774	0.04453	0.929924	0.010772
0.064936	0.053474	0.863245	0.018344
0.041999	0.088946	0.699393	0.169663
0.299127	0.034658	0.643393	0.022822
0.059538	0.87486	0.034911	0.030691
0.005814	0.0	0.994186	0.0

MOTIF	Forebrain_E12.5_H3K4me3_29_40_0.669_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.225976	0.535458	0.066213	0.172354
0.0	0.033496	0.947468	0.019036
0.876293	0.0	0.0	0.123707
0.017599	0.013961	0.919994	0.048446
0.033211	0.100887	0.828444	0.037458
0.016029	0.112039	0.751885	0.120047
0.194784	0.020952	0.711384	0.07288
0.076724	0.883421	0.027792	0.012063
0.008203	0.0	0.987053	0.004744

MOTIF	Midbrain_P0_H3K4me3_43_42_0.649_1.024401e-313
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.230569	0.637941	0.029196	0.102293
0.017111	0.008945	0.946952	0.026992
0.84454	0.0	0.044697	0.110762
0.0	0.020999	0.935908	0.043092
0.044973	0.0	0.881125	0.073902
0.096959	0.077805	0.698572	0.126664
0.168957	0.013749	0.755492	0.061803
0.095738	0.794167	0.04078	0.069315
0.019805	0.0	0.969867	0.010328

MOTIF	Midbrain_E12.5_H3K4me3_17_34_0.704_2.307712e-311
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.025178	0.698774	0.13103	0.145017
0.0	0.034402	0.947028	0.01857
0.800423	0.077659	0.038903	0.083015
0.133524	0.025309	0.829285	0.011881
0.046514	0.057864	0.867749	0.027873
0.264263	0.04224	0.603839	0.089658
0.152633	0.007468	0.748637	0.091261
0.073744	0.910068	0.005954	0.010234
0.007937	0.013937	0.970912	0.007214

MOTIF	Liver_E12.5_H3K4me3_19_22_0.654_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.100687	0.743751	0.09132	0.064241
0.0	0.043433	0.948257	0.00831
0.814579	0.047955	0.055825	0.081641
0.004015	0.069361	0.869614	0.05701
0.257383	0.084723	0.61356	0.044335
0.121623	0.02773	0.715223	0.135424
0.062604	0.022222	0.868177	0.046997
0.170918	0.805503	0.009365	0.014214
0.004329	0.019361	0.965121	0.01119

MOTIF	Neural-Tube_E12.5_H3K4me3_21_39_0.694_2.219474e-317
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.035911	0.765305	0.147012	0.051772
0.0	0.062659	0.917291	0.02005
0.855892	0.049368	0.053524	0.041215
0.002523	0.044926	0.825774	0.126778
0.245951	0.032309	0.634349	0.087392
0.042623	0.040732	0.790154	0.126491
0.130742	0.033976	0.739793	0.095489
0.105391	0.84894	0.031212	0.014457
0.012021	0.0	0.987979	0.0

MOTIF	Liver_E15.5_H3K4me3_25_36_0.656_9.494355e-314
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.043762	0.834456	0.014562	0.10722
0.0	0.031301	0.957398	0.011301
0.80866	0.051509	0.079237	0.060593
0.005956	0.058248	0.828956	0.10684
0.020072	0.086946	0.769159	0.123823
0.149402	0.052906	0.66602	0.131672
0.161641	0.014885	0.762809	0.060665
0.056569	0.84968	0.088912	0.004839
0.005643	0.025528	0.961043	0.007786

MOTIF	Limb_E15.5_H3K4me3_29_42_0.664_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.016144	0.857155	0.095884	0.030817
0.0	0.132071	0.858487	0.009441
0.881243	0.0	0.027936	0.09082
0.005891	0.021231	0.961442	0.011436
0.097168	0.054689	0.76319	0.084953
0.269746	0.033807	0.577245	0.119202
0.195337	0.081368	0.712365	0.01093
0.061816	0.788353	0.087359	0.062472
0.00957	0.049022	0.929293	0.012116

MOTIF	Neural-Tube_E14.5_H3K4me3_42_34_0.650_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.044408	0.81193	0.11731	0.026353
0.027689	0.019878	0.943788	0.008645
0.891912	0.0	0.031328	0.07676
0.00416	0.016356	0.921808	0.057677
0.044899	0.070931	0.780868	0.103302
0.256858	0.02668	0.608648	0.107814
0.101924	0.015087	0.866454	0.016536
0.255726	0.610042	0.042969	0.091262
0.022039	0.028646	0.934008	0.015306

MOTIF	Heart_E11.5_H3K4me3_54_23_0.600_3.164313e-297
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.058587	0.883241	0.040641	0.017531
0.021877	0.056966	0.741278	0.179879
0.018819	0.869303	0.062448	0.049429
0.033955	0.647117	0.090549	0.228379
0.065019	0.741376	0.043661	0.149944
0.056394	0.821025	0.026483	0.096098
0.040802	0.035875	0.029048	0.894275
0.008129	0.808741	0.055875	0.127255
0.00941	0.893049	0.066109	0.031431
0.020256	0.348414	0.130372	0.500957

MOTIF	Cranio-Facial_E11.5_H3K4me3_36_12_0.663_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.651992	0.146224	0.124699	0.077085
0.102505	0.080074	0.769004	0.048416
0.087581	0.041918	0.826028	0.044473
0.086889	0.145185	0.708388	0.059539
0.060335	0.036536	0.874411	0.028718
0.11525	0.788124	0.019691	0.076935
0.054895	0.032506	0.869419	0.043179
0.039407	0.056443	0.893788	0.010362
0.072363	0.015464	0.891963	0.02021

MOTIF	Kidney_P0_H3K4me3_25_10_0.680_4.685046e-312
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.040647	0.812266	0.099895	0.047192
0.096879	0.782127	0.060628	0.060366
0.059512	0.025436	0.766662	0.14839
0.008842	0.829451	0.132488	0.02922
0.058471	0.692747	0.085927	0.162855
0.063249	0.661721	0.109848	0.165182
0.03214	0.936369	0.017594	0.013896
0.043685	0.036844	0.14404	0.775431
0.002571	0.949728	0.034811	0.012889
0.03857	0.145481	0.630232	0.185717

MOTIF	Midbrain_E13.5_H3K4me3_51_20_0.617_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.009278	0.912826	0.066537	0.011358
0.113273	0.732926	0.075587	0.078214
0.066706	0.028605	0.688009	0.21668
0.033042	0.833605	0.099221	0.034133
0.024826	0.72251	0.074624	0.17804
0.076655	0.738688	0.119436	0.06522
0.049159	0.90693	0.020241	0.02367
0.046898	0.039269	0.101632	0.8122
0.00663	0.95959	0.026434	0.007345
0.186816	0.48041	0.22363	0.109143

MOTIF	Stomach_E14.5_H3K4me3_38_11_0.664_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.035832	0.850452	0.102684	0.011033
0.070101	0.827774	0.08425	0.017875
0.066073	0.026978	0.777732	0.129217
0.008773	0.846245	0.11496	0.030022
0.095558	0.689912	0.069013	0.145517
0.064537	0.638521	0.127963	0.168979
0.023178	0.926489	0.024836	0.025496
0.027089	0.04617	0.110801	0.81594
0.004567	0.878454	0.049664	0.067316
0.122662	0.499063	0.119691	0.258584

MOTIF	Cranio-Facial_E12.5_H3K4me3_46_19_0.654_7.804182e-311
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.008026	0.822353	0.120057	0.049563
0.019046	0.855452	0.104802	0.020701
0.01583	0.053179	0.759395	0.171597
0.049559	0.743602	0.101727	0.105112
0.018494	0.72209	0.084518	0.174898
0.052775	0.810772	0.063622	0.072832
0.030136	0.852134	0.099929	0.017801
0.033402	0.056328	0.086594	0.823675
0.005394	0.854817	0.029625	0.110163
0.187278	0.354667	0.182671	0.275384

MOTIF	Cranio-Facial_E14.5_H3K4me3_45_12_0.639_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.032967	0.844332	0.11555	0.00715
0.069559	0.828957	0.084969	0.016516
0.079122	0.048082	0.698606	0.17419
0.046594	0.769582	0.10609	0.077734
0.017089	0.856029	0.080326	0.046556
0.07331	0.631401	0.096022	0.199268
0.026771	0.925418	0.023715	0.024096
0.028195	0.037804	0.110531	0.823471
0.006319	0.904638	0.034149	0.054894
0.07684	0.337964	0.208981	0.376214

MOTIF	Cranio-Facial_E15.5_H3K4me3_48_20_0.621_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.03876	0.824609	0.088602	0.048029
0.071983	0.721197	0.131036	0.075783
0.072799	0.019116	0.706308	0.201777
0.034938	0.86137	0.017975	0.085717
0.02326	0.748671	0.06867	0.159399
0.059145	0.794238	0.082132	0.064486
0.032521	0.878308	0.022634	0.066538
0.058548	0.054894	0.148275	0.738283
0.002662	0.966468	0.022626	0.008245

MOTIF	Cranio-Facial_E13.5_H3K4me3_30_13_0.660_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.011015	0.858156	0.092676	0.038153
0.05765	0.783657	0.097084	0.061609
0.061236	0.055494	0.754813	0.128457
0.030417	0.878167	0.02681	0.064606
0.077343	0.718423	0.073265	0.130969
0.064254	0.70432	0.093172	0.138254
0.027142	0.848349	0.06652	0.057989
0.049542	0.077997	0.111754	0.760707
0.002938	0.899756	0.045978	0.051328
0.054266	0.293628	0.427592	0.224514

MOTIF	Limb_E12.5_H3K4me3_41_18_0.627_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.032848	0.832148	0.103904	0.0311
0.102099	0.783881	0.094192	0.019828
0.046446	0.059954	0.752902	0.140698
0.041534	0.854527	0.029145	0.074794
0.021979	0.797462	0.074441	0.106118
0.05042	0.697666	0.075197	0.176717
0.02641	0.88548	0.023241	0.064869
0.020758	0.09065	0.089939	0.798653
0.004933	0.874232	0.033436	0.0874

MOTIF	Stomach_E15.5_H3K4me3_46_19_0.633_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.050781	0.810088	0.100149	0.038981
0.114953	0.76667	0.095452	0.022925
0.061705	0.047129	0.75481	0.136356
0.041536	0.856175	0.017133	0.085157
0.101475	0.771422	0.068139	0.058965
0.07349	0.748922	0.108945	0.068642
0.039196	0.868169	0.022682	0.069953
0.032123	0.032744	0.127169	0.807964
0.001613	0.887188	0.034241	0.076959

MOTIF	Heart_E15.5_H3K9ac_41_41_0.588_8.618427e-313
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.278532	0.454108	0.0	0.26736
0.0	0.966959	0.0	0.033041
0.154231	0.555276	0.014294	0.2762
0.291934	0.616365	0.010594	0.081107
0.09468	0.02414	0.0	0.88118
0.004759	0.978938	0.016303	0.0
0.078659	0.020823	0.823234	0.077284
0.0	0.986542	0.013458	0.0
0.0273	0.054818	0.889772	0.02811
0.053874	0.875624	0.03509	0.035411

MOTIF	Hindbrain_E12.5_H3K9ac_17_30_0.607_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.02613	0.882311	0.060018	0.031542
0.231884	0.742706	0.02541	0.0
0.301455	0.644348	0.054198	0.0
0.058099	0.038686	0.0	0.903216
0.0	0.979316	0.020684	0.0
0.040809	0.0	0.931655	0.027537
0.0	0.949497	0.046106	0.004397
0.021765	0.046795	0.868827	0.062613