MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Limb_E14.5_H3K4me2_44_17_0.584_5.006522e-226 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.175451 0.123024 0.108705 0.592819 0.064813 0.04752 0.818276 0.069391 0.071994 0.860262 0.031717 0.036027 0.243875 0.034009 0.604067 0.118049 0.002525 0.04292 0.954555 0.0 0.35782 0.544429 0.057763 0.039988 0.006588 0.062096 0.927931 0.003385 0.816183 0.045599 0.055717 0.082501 0.007134 0.034075 0.938919 0.019872 0.060835 0.843331 0.077795 0.018039 0.104123 0.193136 0.124636 0.578105 MOTIF Midbrain_E13.5_H3K4me2_82_110_0.541_4.19605e-139 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.306115 0.065186 0.610706 0.017994 0.201937 0.622978 0.032605 0.14248 0.060713 0.040549 0.867001 0.031737 0.014026 0.072353 0.913622 0.0 0.683249 0.052892 0.047627 0.216233 0.027888 0.015921 0.956191 0.0 0.947786 0.014108 0.009395 0.028711 0.244575 0.061373 0.668956 0.025096 0.013654 0.905791 0.041064 0.039492 MOTIF Forebrain_E15.5_H3K4me2_48_81_0.585_2.749471e-274 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.11903 0.071618 0.482183 0.32717 0.031712 0.94433 0.01795 0.006008 0.064521 0.360928 0.548054 0.026497 0.0 0.02053 0.97947 0.0 0.878238 0.054011 0.023042 0.044709 0.01568 0.011878 0.972442 0.0 0.884136 0.031844 0.044537 0.039483 0.019334 0.0 0.966967 0.013698 0.040226 0.746756 0.036564 0.176454 MOTIF Midbrain_E15.5_H3K4me2_45_73_0.598_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.024424 0.05859 0.522502 0.394484 0.015661 0.945622 0.019775 0.018942 0.044633 0.048105 0.85636 0.050902 0.0 0.050729 0.949271 0.0 0.687223 0.05341 0.032324 0.227043 0.009097 0.010476 0.980427 0.0 0.862933 0.028083 0.094766 0.014219 0.263944 0.011703 0.713972 0.010381 0.050442 0.836695 0.0 0.112863 0.173902 0.171884 0.2582 0.396014 MOTIF Heart_P0_H3K9ac_48_89_0.565_2.360029e-138 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.343751 0.637076 0.019174 0.0 0.025063 0.037461 0.704661 0.232815 0.315053 0.672485 0.0 0.012462 0.061309 0.094234 0.810164 0.034292 0.0 0.157627 0.842373 0.0 0.822813 0.059902 0.0 0.117285 0.0 0.0 1.0 0.0 0.888816 0.022865 0.088319 0.0 0.028809 0.03528 0.935911 0.0 MOTIF Intestine_E16.5_H3K9ac_58_59_0.541_1.090222e-43 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.051249 0.040388 0.857246 0.051117 0.020066 0.948541 0.0 0.031393 0.059477 0.02988 0.701299 0.209344 0.0 0.028284 0.971716 0.0 0.678786 0.027251 0.022906 0.271057 0.0 0.005908 0.994092 0.0 0.902102 0.04133 0.022335 0.034233 0.201376 0.0351 0.670098 0.093426 0.079662 0.867547 0.040014 0.012777 0.552633 0.25295 0.105085 0.089332 MOTIF Forebrain_E13.5_H3K4me2_59_55_0.560_1.665674e-309 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.013998 0.632216 0.301087 0.0527 0.050958 0.067271 0.032413 0.849358 0.0 0.994933 0.005067 0.0 0.035326 0.0 0.037954 0.92672 0.0 0.718211 0.281789 0.0 0.077915 0.753688 0.078454 0.089943 0.0271 0.01314 0.945108 0.014652 0.012085 0.937163 0.035922 0.014829 0.049373 0.574091 0.0 0.376536 0.0 0.0 0.588694 0.411306 MOTIF Heart_E13.5_H3K4me2_33_62_0.579_0 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.20906 0.79094 0.0 0.0 0.037844 0.083421 0.0 0.878735 0.0 1.0 0.0 0.0 0.051147 0.082285 0.087472 0.779096 0.0 1.0 0.0 0.0 0.107342 0.754446 0.138212 0.0 0.020797 0.0 0.979203 0.0 0.0 0.900014 0.052712 0.047274 MOTIF Hindbrain_E12.5_H3K4me2_66_48_0.558_1.37013e-173 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.022486 0.891915 0.058459 0.027139 0.121995 0.019689 0.03681 0.821505 0.000442 0.94969 0.028813 0.021055 0.148487 0.046349 0.037575 0.767589 0.001458 0.959615 0.038927 0.0 0.045273 0.703782 0.015366 0.235579 0.18459 0.019126 0.748212 0.048072 0.068578 0.841363 0.062832 0.027226 0.263447 0.472227 0.226684 0.037642 0.100167 0.140194 0.471973 0.287666 MOTIF Hindbrain_P0_H3K4me2_54_81_0.580_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.767539 0.017039 0.215422 0.120594 0.040171 0.037029 0.802206 0.0 0.992592 0.007408 0.0 0.038676 0.039207 0.061844 0.860274 0.0 0.927021 0.072979 0.0 0.010469 0.69152 0.203635 0.094376 0.061894 0.047218 0.877683 0.013205 0.0 0.897903 0.077581 0.024515 0.412503 0.491672 0.079845 0.01598 MOTIF Stomach_E14.5_H3K4me2_78_59_0.550_3.635942e-104 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 1.0 0.0 0.0 0.0 0.0 0.887363 0.076324 0.036313 0.202462 0.033049 0.0 0.764489 0.013494 0.97937 0.007136 0.0 0.069688 0.021541 0.014055 0.894717 0.0 0.938917 0.061083 0.0 0.018661 0.863471 0.055086 0.062783 0.060295 0.067397 0.865629 0.006678 0.015348 0.833572 0.134541 0.016538 MOTIF Cranio-Facial_E14.5_H3K4me2_88_47_0.517_5.127061e-12 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.011402 0.947704 0.02296 0.017934 0.10538 0.842278 0.015319 0.037023 0.054564 0.016881 0.0 0.928555 0.0 0.979515 0.014943 0.005543 0.047075 0.013093 0.017371 0.922461 0.0 0.938577 0.05809 0.003333 0.022383 0.754553 0.143211 0.079853 0.214755 0.080566 0.704679 0.0 0.019358 0.515559 0.405777 0.059306 0.095655 0.359874 0.351839 0.192632 0.028285 0.111527 0.045423 0.814765 0.028822 0.0 0.0 0.971178 MOTIF Forebrain_E14.5_H3K4me2_84_82_0.535_2.360454e-75 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.00713 0.853386 0.131393 0.00809 0.02693 0.649635 0.024285 0.29915 0.199368 0.015776 0.057006 0.727849 0.0 0.96835 0.017695 0.013954 0.041535 0.007238 0.018188 0.933039 0.0 0.933828 0.066172 0.0 0.078253 0.882119 0.013457 0.026171 0.325943 0.029558 0.625698 0.0188 0.0 0.898127 0.0873 0.014573 0.149804 0.473012 0.092266 0.284918 MOTIF Liver_E14.5_H3K4me2_57_45_0.546_1.128761e-123 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.016545 0.821529 0.01994 0.141985 0.039226 0.026668 0.031405 0.902701 0.0 0.935277 0.030911 0.033812 0.058454 0.009615 0.019467 0.912464 0.003808 0.944206 0.045608 0.006377 0.024488 0.916784 0.032627 0.0261 0.143361 0.087271 0.708994 0.060374 0.117678 0.829308 0.038355 0.014659 0.124172 0.387587 0.347504 0.140736 0.019545 0.559065 0.170063 0.251326 MOTIF Intestine_E14.5_H3K4me2_79_59_0.536_9.583048e-54 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.309985 0.098092 0.250017 0.341906 0.010616 0.892055 0.064201 0.033128 0.024554 0.730975 0.041524 0.202946 0.116851 0.007244 0.019156 0.85675 0.0 0.94406 0.027273 0.028667 0.126525 0.027968 0.02935 0.816157 0.001445 0.940709 0.057847 0.0 0.01196 0.689005 0.014417 0.284617 0.200854 0.030197 0.747275 0.021674 0.032469 0.848053 0.087651 0.031827 0.40554 0.174829 0.325033 0.094597 MOTIF Forebrain_E13.5_H3K4me2_57_74_0.562_1.093588e-184 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.002193 0.643336 0.313355 0.041117 0.110493 0.649266 0.013472 0.226769 0.187478 0.0 0.0 0.812522 0.0 0.970394 0.029606 0.0 0.065253 0.087766 0.043713 0.803267 0.0 0.93567 0.059268 0.005063 0.19493 0.623621 0.085784 0.095665 0.052973 0.010058 0.931576 0.005393 0.037384 0.84441 0.064471 0.053734 MOTIF Intestine_E15.5_H3K4me2_54_63_0.564_1.472787e-266 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.09081 0.816972 0.0 0.092218 0.054408 0.0 0.0 0.945592 0.0 1.0 0.0 0.0 0.03424 0.0 0.018879 0.946881 0.0 0.982737 0.017263 0.0 0.036015 0.891057 0.049124 0.023804 0.07555 0.075437 0.849013 0.0 0.01714 0.847622 0.096867 0.03837 0.348663 0.120858 0.473104 0.057375 MOTIF Midbrain_E14.5_H3K4me2_69_51_0.562_1.006759e-177 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.013107 0.795893 0.143995 0.047005 0.028681 0.752882 0.020468 0.19797 0.141422 0.0159 0.0 0.842678 0.0 0.957726 0.031207 0.011067 0.020046 0.015359 0.045485 0.91911 0.002603 0.964473 0.032924 0.0 0.064713 0.846324 0.022731 0.066233 0.040451 0.06862 0.871952 0.018977 0.134406 0.574117 0.243017 0.048461 0.284805 0.160632 0.406416 0.148147 0.033707 0.027555 0.605589 0.333149 MOTIF Cranio-Facial_E13.5_H3K4me2_77_51_0.529_1.026224e-184 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.031057 0.883167 0.030976 0.0548 0.029189 0.789982 0.129438 0.051391 0.188811 0.0 0.0 0.811189 0.0 0.957245 0.027319 0.015436 0.072432 0.0 0.0 0.927568 0.0 0.773631 0.222046 0.004323 0.024466 0.823832 0.050113 0.101589 0.169619 0.036425 0.737644 0.056311 0.0 0.831132 0.0 0.168868 MOTIF Lung_E16.5_H3K4me2_82_78_0.529_4.815707e-140 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.109784 0.610181 0.053566 0.226469 0.024468 0.918561 0.042522 0.01445 0.159181 0.012674 0.035163 0.792981 0.0 0.962528 0.024909 0.012563 0.175588 0.055467 0.031182 0.737763 0.0 0.957612 0.037711 0.004676 0.144823 0.759965 0.023777 0.071436 0.176054 0.043338 0.6945 0.086108 0.005439 0.950214 0.033008 0.011339 MOTIF Stomach_P0_H3K4me2_60_51_0.548_6.714616e-125 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.131321 0.757952 0.050863 0.059864 0.110417 0.826144 0.048754 0.014686 0.157443 0.027701 0.033048 0.781808 0.0 0.965906 0.012916 0.021179 0.114563 0.014596 0.06162 0.809221 0.001359 0.959468 0.035599 0.003574 0.11346 0.829651 0.028489 0.0284 0.211114 0.080824 0.660769 0.047293 0.017765 0.900183 0.046194 0.035858 0.227951 0.139088 0.439139 0.193821 MOTIF Cranio-Facial_E14.5_H3K9ac_66_92_0.555_2.525786e-185 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.004402 0.587484 0.392795 0.015319 0.103562 0.853067 0.013555 0.029815 0.0 0.036076 0.056021 0.907902 0.0 0.940497 0.059503 0.0 0.084814 0.045629 0.086234 0.783323 0.0 0.973397 0.026603 0.0 0.40725 0.518756 0.030688 0.043306 0.005431 0.023893 0.933224 0.037453 0.04279 0.943383 0.0 0.013827 MOTIF Kidney_P0_H3K9ac_66_58_0.531_2.472215e-51 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.00413 0.630086 0.137442 0.228342 0.014493 0.877245 0.025463 0.082799 0.123357 0.02571 0.037367 0.813566 0.0 0.977906 0.018774 0.00332 0.06418 0.020052 0.037379 0.878389 0.001488 0.914375 0.084137 0.0 0.073038 0.814318 0.034985 0.077659 0.192765 0.048772 0.754477 0.003986 0.027409 0.608041 0.259067 0.105484 0.566036 0.11236 0.102433 0.219172 MOTIF Forebrain_E13.5_H3K9ac_77_68_0.522_9.345003e-45 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.108063 0.213626 0.123446 0.554866 0.012174 0.715023 0.0 0.272803 0.019415 0.899707 0.043152 0.037726 0.177888 0.017253 0.06105 0.74381 0.0 0.958123 0.032163 0.009714 0.053054 0.0 0.020915 0.926032 0.004053 0.97684 0.019108 0.0 0.136892 0.729297 0.033742 0.10007 0.213972 0.013319 0.679177 0.093531 0.060759 0.891637 0.017399 0.030205 MOTIF Lung_E15.5_H3K9ac_81_113_0.534_3.190354e-33 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.049477 0.763805 0.088171 0.098547 0.147356 0.064945 0.780348 0.007351 0.014388 0.062519 0.922583 0.00051 0.892561 0.0 0.034101 0.073339 0.179683 0.042571 0.777746 0.0 0.823946 0.033818 0.02691 0.115326 0.05907 0.162452 0.760093 0.018385 0.164359 0.048312 0.787329 0.0 0.841188 0.012597 0.05411 0.092104 0.281163 0.554603 0.073685 0.09055 MOTIF Heart_E16.5_H3K4me3_76_86_0.525_8.976466e-114 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.019238 0.91877 0.047979 0.014014 0.016847 0.08498 0.033273 0.864901 0.000312 0.945527 0.032269 0.021892 0.025669 0.071209 0.070445 0.832677 0.001619 0.956882 0.039165 0.002335 0.02213 0.603446 0.026869 0.347555 0.206217 0.056953 0.711588 0.025243 0.110451 0.798184 0.056725 0.03464 0.176293 0.614939 0.048225 0.160542 MOTIF Liver_E16.5_H3K4me3_57_39_0.567_6.325081e-176 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.024856 0.856215 0.014997 0.103931 0.020505 0.069341 0.021711 0.888443 0.0 0.975952 0.011183 0.012865 0.088804 0.007991 0.037357 0.865849 0.004148 0.942151 0.046174 0.007527 0.099491 0.836118 0.026418 0.037973 0.039063 0.043394 0.791082 0.12646 0.049523 0.786343 0.063962 0.100172 0.180083 0.376225 0.288932 0.15476 0.018251 0.380456 0.417776 0.183517 MOTIF Lung_E16.5_H3K4me3_75_52_0.538_1.223354e-69 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.052193 0.079428 0.773828 0.094551 0.027672 0.701286 0.16286 0.108182 0.150673 0.082315 0.666071 0.100941 0.007742 0.043592 0.94781 0.000856 0.777054 0.046347 0.057079 0.11952 0.020909 0.049361 0.928994 0.000736 0.853205 0.046157 0.03627 0.064367 0.107095 0.022359 0.851972 0.018574 0.036438 0.829736 0.080156 0.05367 0.46275 0.26276 0.102769 0.171722 MOTIF Neural-Tube_E12.5_H3K4me3_68_92_0.563_1.205577e-167 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.079501 0.058045 0.799794 0.062661 0.010312 0.961933 0.007811 0.019944 0.262906 0.04411 0.526272 0.166712 0.004172 0.073136 0.922692 0.0 0.755202 0.047859 0.06818 0.128759 0.017955 0.047117 0.934928 0.0 0.87341 0.043172 0.07258 0.010838 0.144522 0.102134 0.731909 0.021435 0.056735 0.732066 0.021084 0.190115 MOTIF Heart_E15.5_H3K9ac_47_173_0.584_1.822036e-198 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.718 0.13 0.089 0.063 0.694 0.095 0.119 0.092 0.077 0.756 0.105 0.062 0.068 0.105 0.061 0.766 0.033 0.832 0.072 0.063 0.075 0.098 0.073 0.754 0.046 0.794 0.095 0.065 0.094 0.75 0.06 0.096 0.095 0.104 0.713 0.088 0.056 0.814 0.076 0.054 0.105 0.692 0.096 0.107 0.079 0.092 0.716 0.113 MOTIF Hindbrain_E12.5_H3K9ac_62_62_0.549_1.370075e-111 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.010574 0.859212 0.12262 0.007594 0.202819 0.014004 0.073079 0.710098 0.0 0.961537 0.030202 0.008261 0.030061 0.069617 0.028061 0.872262 0.006226 0.957291 0.036482 0.0 0.165546 0.752011 0.019437 0.063006 0.270672 0.031619 0.669856 0.027853 0.001961 0.932854 0.049981 0.015203 0.380003 0.554812 0.041717 0.023468 0.0 0.173668 0.659195 0.167137 MOTIF Midbrain_E12.5_H3K9ac_40_34_0.587_7.082328e-282 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.006005 0.714859 0.239507 0.039629 0.14273 0.064922 0.033722 0.758627 0.0 0.981187 0.013681 0.005132 0.076246 0.019847 0.030554 0.873352 0.0 0.942263 0.044741 0.012996 0.017047 0.869277 0.031662 0.082014 0.067267 0.03599 0.86733 0.029412 0.017384 0.773113 0.193978 0.015525 0.19819 0.443765 0.083033 0.275012 0.019735 0.154947 0.578015 0.247303 MOTIF Midbrain_P0_H3K9ac_70_57_0.541_5.014694e-62 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.013229 0.855725 0.084118 0.046928 0.137435 0.048809 0.039982 0.773774 0.0 0.796773 0.184371 0.018857 0.034159 0.034201 0.062397 0.869243 0.004493 0.915907 0.074323 0.005277 0.017554 0.612069 0.036465 0.333912 0.026145 0.079629 0.856502 0.037724 0.010864 0.934453 0.03609 0.018593 0.0 0.542008 0.16083 0.297162 MOTIF Cranio-Facial_E11.5_H3K9ac_52_49_0.572_7.039862e-141 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.022239 0.826025 0.145837 0.005898 0.082039 0.038164 0.031768 0.848028 0.001095 0.980675 0.014156 0.004074 0.092054 0.013261 0.042253 0.852432 0.032354 0.871647 0.095999 0.0 0.135711 0.783859 0.025394 0.055036 0.049274 0.013037 0.930931 0.006758 0.046872 0.780878 0.040877 0.131373 0.013169 0.646849 0.197194 0.142788 MOTIF Neural-Tube_E15.5_H3K9ac_83_84_0.539_6.75813e-70 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.755735 0.125237 0.022185 0.096844 0.053054 0.108247 0.831768 0.00693 0.011499 0.034985 0.949219 0.004298 0.071405 0.782768 0.017492 0.128334 0.039488 0.0 0.72909 0.231421 0.008569 0.178096 0.813335 0.0 0.690493 0.073622 0.067061 0.168825 0.001706 0.01884 0.978179 0.001276 0.814778 0.028576 0.01567 0.140976