MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_E14.5_H3K4me1_53_132_0.518_6.097681e-24
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.808769	0.036818	0.063084	0.091329
0.035152	0.020729	0.923065	0.021053
0.217822	0.607492	0.157358	0.017328
0.023125	0.011993	0.046568	0.918313
0.003592	0.225188	0.741907	0.029313
0.132762	0.124747	0.081119	0.661372
0.032846	0.945319	0.014876	0.006959
0.913698	0.035215	0.002882	0.048205
0.0	0.1414	0.705406	0.153194

MOTIF	Heart_E13.5_H3K4me1_12_108_0.529_5.39422e-91
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0269	0.774072	0.169122	0.029906
0.743834	0.122612	0.103241	0.030313
0.018563	0.036051	0.848451	0.096934
0.042217	0.919269	0.038514	0.0
0.017288	0.018647	0.005194	0.958871
0.006046	0.018249	0.946537	0.029168
0.042781	0.035012	0.145356	0.77685
0.155663	0.660669	0.077863	0.105805
0.75174	0.053872	0.06255	0.131838
0.016114	0.24864	0.37825	0.356996

MOTIF	Lung_E15.5_H3K4me1_42_125_0.521_1.250618e-52
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.097228	0.83531	0.04065	0.026812
0.74896	0.174579	0.04215	0.034311
0.052282	0.021764	0.811322	0.114632
0.253915	0.722667	0.020897	0.00252
0.02361	0.087017	0.035406	0.853968
0.0	0.008834	0.978673	0.012493
0.103899	0.039705	0.066964	0.789431
0.060065	0.808199	0.114266	0.017469
0.890684	0.035848	0.033145	0.040323
0.021721	0.326358	0.614926	0.036995

MOTIF	Midbrain_E14.5_H3K4me1_54_101_0.518_2.095135e-19
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.118568	0.106881	0.396353	0.378198
0.035059	0.886921	0.057479	0.02054
0.014703	0.952462	0.032835	0.0
0.02756	0.027584	0.00136	0.943496
0.002831	0.081248	0.904779	0.011142
0.236317	0.383227	0.076436	0.30402
0.0	0.877218	0.122782	0.0
0.926806	0.00562	0.009931	0.057643
0.0	0.064466	0.736649	0.198885
0.035768	0.847751	0.056356	0.060125

MOTIF	Heart_P0_H3K4me1_13_58_0.526_1.589562e-38
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.056456	0.897382	0.014436	0.031726
0.008588	0.601836	0.307083	0.082493
0.082752	0.133693	0.0	0.783555
0.006284	0.03803	0.949996	0.00569
0.313993	0.372442	0.142775	0.17079
0.006034	0.966444	0.025082	0.00244
0.960705	0.013377	0.01416	0.011758
0.0	0.032226	0.877531	0.090244
0.026281	0.947199	0.02652	0.0
0.232165	0.028269	0.207539	0.532026

MOTIF	Kidney_E15.5_H3K4me1_65_133_0.513_4.157882e-33
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.012871	0.92931	0.0	0.057819
0.056073	0.749643	0.182388	0.011896
0.042399	0.051821	0.022484	0.883296
0.0	0.022576	0.777581	0.199842
0.196108	0.648989	0.028145	0.126758
0.008977	0.980263	0.005714	0.005046
0.949076	0.003149	0.035919	0.011856
0.0	0.065649	0.694782	0.239568
0.079591	0.802597	0.08556	0.032252

MOTIF	Midbrain_E16.5_H3K4me1_39_47_0.524_4.296623e-35
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.022244	0.906857	0.007621	0.063279
0.023751	0.844915	0.125732	0.005603
0.041282	0.181305	0.019991	0.757422
0.027255	0.031609	0.776372	0.164765
0.181364	0.661829	0.054154	0.102653
0.002088	0.841267	0.152333	0.004312
0.874268	0.08606	0.016525	0.023147
0.013292	0.052301	0.767137	0.167271
0.039979	0.864351	0.050743	0.044927
0.114364	0.0	0.204877	0.680758
0.014079	0.453642	0.53228	0.0

MOTIF	Neural-Tube_E15.5_H3K4me1_34_110_0.528_3.948947e-99
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.9046	0.024522	0.0	0.070878
0.002271	0.041623	0.956106	0.0
0.089072	0.881646	0.029282	0.0
0.0	0.007078	0.055251	0.937671
0.0	0.08307	0.91693	0.0
0.334211	0.0	0.39226	0.273529
0.038746	0.902635	0.025893	0.032726
0.849296	0.011371	0.139333	0.0
0.0	0.084485	0.868957	0.046559

MOTIF	Heart_E11.5_H3K4me2_97_113_0.518_2.435665e-22
letter-probability matrix: alength= 4 w= 7 nsites= 100 E= 1.0e-1
0.290209	0.526463	0.183328	0.0
0.0	0.0	0.369999	0.630001
0.0	0.050976	0.903278	0.045746
0.497837	0.0	0.419409	0.082754
0.033753	0.935933	0.030314	0.0
0.962506	0.037494	0.0	0.0
0.0	0.002269	0.986104	0.011626

MOTIF	Midbrain_E15.5_H3K4me2_74_102_0.551_9.65491e-111
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.049726	0.853682	0.029592	0.067
0.0	0.0	0.679136	0.320864
0.075589	0.06952	0.610507	0.244384
0.162528	0.033457	0.780835	0.02318
0.03681	0.911683	0.040108	0.011398
0.93499	0.021333	0.025202	0.018474
0.0	0.014191	0.972716	0.013093
0.026847	0.924531	0.033519	0.015102
0.205045	0.716435	0.056316	0.022204

MOTIF	Midbrain_E16.5_H3K4me1_35_106_0.525_2.780839e-44
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.631582	0.368418	0.0
0.146926	0.024224	0.028717	0.800133
0.00932	0.018333	0.972347	0.0
0.109344	0.0	0.843474	0.047182
0.01596	0.887256	0.092892	0.003891
0.954062	0.041938	0.004	0.0
0.0	0.0	0.966694	0.033306
0.015653	0.876562	0.098431	0.009353
0.238908	0.25394	0.022781	0.484371

MOTIF	Forebrain_P0_H3K4me1_20_59_0.533_1.632552e-49
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.745788	0.111579	0.084955	0.057678
0.023449	0.069623	0.785826	0.121102
0.049382	0.888874	0.039421	0.022323
0.046308	0.094679	0.066781	0.792232
0.016316	0.210643	0.652021	0.121021
0.105013	0.75214	0.0	0.142848
0.002828	0.950015	0.039404	0.007753
0.801252	0.113815	0.078355	0.006578
0.013387	0.080377	0.87309	0.033146

MOTIF	Neural-Tube_E12.5_H3K4me1_32_93_0.525_1.155653e-43
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.072234	0.040475	0.835858	0.051433
0.040077	0.881846	0.030298	0.047779
0.015324	0.04802	0.12481	0.811845
0.006836	0.092104	0.659123	0.241937
0.128259	0.77036	0.0	0.101381
0.00352	0.969811	0.02327	0.003399
0.927971	0.046907	0.025122	0.0
0.0	0.223806	0.667297	0.108897
0.144916	0.789154	0.048957	0.016973

MOTIF	Forebrain_E13.5_H3K4me1_26_22_0.535_2.334827e-88
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.012926	0.855931	0.121114	0.010029
0.796672	0.144757	0.036176	0.022395
0.010983	0.040141	0.855313	0.093562
0.092729	0.858338	0.024787	0.024146
0.053963	0.063548	0.096663	0.785826
0.015499	0.121709	0.798438	0.064355
0.044177	0.696516	0.16097	0.098337
0.016243	0.857472	0.104367	0.021919
0.685152	0.214422	0.030505	0.06992
0.062616	0.637579	0.224646	0.075159
0.139067	0.007334	0.744387	0.109212
0.367036	0.237573	0.054344	0.341048

MOTIF	Lung_P0_H3K4me1_39_92_0.520_2.978231e-28
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.099458	0.805111	0.05169	0.043741
0.798547	0.024614	0.17082	0.006019
0.0	0.02563	0.970535	0.003834
0.039552	0.920183	0.032409	0.007855
0.112353	0.164141	0.026696	0.69681
0.02772	0.059222	0.906096	0.006963
0.232978	0.438719	0.240243	0.088061
0.008787	0.965558	0.019672	0.005983
0.843258	0.03199	0.008442	0.11631

MOTIF	Cranio-Facial_E13.5_H3K4me1_48_70_0.519_2.041321e-37
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.018136	0.926687	0.038476	0.016701
0.7512	0.211326	0.032785	0.004689
0.017442	0.038054	0.902041	0.042463
0.053025	0.877543	0.028352	0.04108
0.0	0.170687	0.040611	0.788702
0.033477	0.112928	0.513789	0.339806
0.159539	0.768631	0.019829	0.052001
0.0	0.98158	0.016106	0.002314
0.850719	0.120574	0.028707	0.0
0.0	0.431781	0.488263	0.079956

MOTIF	Lung_E14.5_H3K4me1_38_139_0.519_3.410427e-23
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.757269	0.03558	0.076013	0.131138
0.002047	0.0	0.981489	0.016464
0.076639	0.874594	0.027283	0.021484
0.0	0.029994	0.032493	0.937512
0.007225	0.072026	0.912228	0.008521
0.253428	0.566778	0.0	0.179794
0.0	0.983729	0.004991	0.01128
0.921933	0.055553	0.022514	0.0
0.018445	0.267069	0.484103	0.230383

MOTIF	Hindbrain_E12.5_H3K4me1_27_66_0.533_6.833589e-84
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.069724	0.842281	0.058939	0.029056
0.643794	0.038083	0.281531	0.036592
0.012629	0.027532	0.929295	0.030544
0.024524	0.918899	0.036213	0.020363
0.051639	0.016239	0.01364	0.918482
0.002183	0.348131	0.628668	0.021018
0.276535	0.634165	0.045399	0.043902
0.002854	0.860376	0.133232	0.003538
0.870438	0.062459	0.025561	0.041542
0.0	0.250471	0.667196	0.082333

MOTIF	Forebrain_E16.5_H3K4me1_27_41_0.538_1.149101e-118
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.015274	0.808277	0.150198	0.026251
0.793514	0.109702	0.072548	0.024236
0.020113	0.035252	0.86601	0.078626
0.144896	0.800064	0.02781	0.027231
0.0436	0.041248	0.082694	0.832459
0.016016	0.16924	0.781093	0.033651
0.100447	0.674791	0.051391	0.173372
0.011037	0.892915	0.067306	0.028742
0.759492	0.15457	0.041927	0.044012
0.104255	0.311856	0.492092	0.091797

MOTIF	Midbrain_E13.5_H3K4me1_34_46_0.529_6.80813e-69
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.009152	0.902739	0.083494	0.004615
0.78242	0.131879	0.044615	0.041086
0.013123	0.02572	0.883759	0.077399
0.110129	0.818571	0.037062	0.034238
0.028991	0.091558	0.152718	0.726732
0.011592	0.289536	0.612098	0.086774
0.111393	0.769699	0.02358	0.095328
0.011269	0.946328	0.023976	0.018428
0.81251	0.095753	0.03152	0.060217
0.0	0.304456	0.54609	0.149454

MOTIF	Neural-Tube_E12.5_H3K4me1_54_46_0.517_2.200609e-27
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.008148	0.934233	0.046834	0.010786
0.819392	0.112506	0.047488	0.020614
0.006293	0.035081	0.861797	0.09683
0.07996	0.865904	0.024424	0.029712
0.051841	0.073882	0.111464	0.762812
0.057218	0.254638	0.663212	0.024932
0.127572	0.583687	0.139847	0.148894
0.020876	0.938598	0.017398	0.023128
0.832195	0.065466	0.0433	0.059039
0.005017	0.506314	0.423643	0.065026
0.642171	0.011056	0.313854	0.032919

MOTIF	Heart_E14.5_H3K27ac_74_86_0.509_3.693223e-12
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.179031	0.637626	0.098218	0.085125
0.021888	0.662877	0.305673	0.009561
0.881777	0.012962	0.028737	0.076523
0.0	0.02886	0.763651	0.207489
0.017972	0.964242	0.017786	0.0
0.013601	0.01867	0.037732	0.929997
0.011147	0.088195	0.871388	0.02927
0.045757	0.850971	0.037489	0.065783
0.010097	0.952065	0.025859	0.01198
0.596827	0.0	0.269371	0.133802

MOTIF	Hindbrain_E11.5_H3K27ac_49_168_0.531_3.423365e-26
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.04	0.916	0.033	0.011
0.865	0.017	0.043	0.075
0.03	0.001	0.787	0.182
0.001	0.997	0.001	0.001
0.001	0.054	0.001	0.944
0.017	0.087	0.895	0.001
0.054	0.553	0.196	0.197
0.022	0.723	0.117	0.138
0.699	0.096	0.031	0.174
0.058	0.189	0.619	0.134

MOTIF	Hindbrain_E16.5_H3K27ac_57_92_0.528_4.50049e-41
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.011223	0.964426	0.022854	0.001498
0.85547	0.058086	0.062864	0.023581
0.0	0.117085	0.74682	0.136095
0.134237	0.850984	0.014779	0.0
0.046951	0.022752	0.025808	0.904489
0.004325	0.057377	0.910157	0.028141
0.131277	0.608269	0.031415	0.229039
0.006987	0.780127	0.196349	0.016537
0.728246	0.142367	0.052839	0.076548
0.010737	0.200042	0.676265	0.112957

MOTIF	Forebrain_E14.5_H3K27ac_49_75_0.529_1.841383e-29
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.130807	0.748783	0.105436	0.014974
0.736497	0.149192	0.071716	0.042595
0.002452	0.038677	0.85987	0.099002
0.113729	0.845629	0.019465	0.021177
0.07191	0.01875	0.112397	0.796942
0.002602	0.239876	0.748641	0.008881
0.109815	0.716596	0.009539	0.16405
0.003088	0.945279	0.038437	0.013195
0.833836	0.083641	0.033611	0.048912

MOTIF	Forebrain_E12.5_H3K27ac_42_79_0.529_4.413526e-36
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.085966	0.807842	0.103506	0.002686
0.892981	0.024139	0.055799	0.027081
0.001545	0.075765	0.822429	0.10026
0.138901	0.838932	0.008345	0.013822
0.092742	0.040488	0.102425	0.764345
0.003667	0.102075	0.868543	0.025716
0.085463	0.639135	0.14192	0.133482
0.022203	0.896553	0.04305	0.038194
0.73657	0.15364	0.058236	0.051555

MOTIF	Hindbrain_P0_H3K27ac_59_92_0.522_2.001062e-30
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.077291	0.692586	0.224085	0.006038
0.846962	0.03588	0.086789	0.030369
0.009404	0.078355	0.889901	0.022339
0.167369	0.815675	0.008262	0.008693
0.063784	0.020542	0.044166	0.871508
0.0289	0.048337	0.882959	0.039804
0.101105	0.631108	0.055167	0.21262
0.016209	0.92816	0.031279	0.024353
0.869647	0.032061	0.050244	0.048048
0.050845	0.53924	0.259562	0.150352

MOTIF	Kidney_E14.5_H3K27ac_65_92_0.520_1.028474e-28
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.821096	0.085065	0.09384	0.0
0.00236	0.021074	0.970244	0.006322
0.168272	0.762364	0.044896	0.024468
0.0	0.118184	0.254663	0.627153
0.003039	0.0	0.960667	0.036295
0.068088	0.846017	0.03775	0.048144
0.0	0.836096	0.163904	0.0
0.825085	0.0	0.09009	0.084824
0.0	0.135125	0.627494	0.237381

MOTIF	Intestine_E14.5_H3K27ac_98_137_0.505_7.157312e-07
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.871616	0.033696	0.089529	0.005158
0.0	0.002564	0.974148	0.023287
0.197367	0.802633	0.0	0.0
0.0	0.076597	0.041682	0.881721
0.007472	0.0	0.938964	0.053564
0.223113	0.685051	0.0	0.091835
0.0	0.943168	0.053883	0.00295
0.744221	0.177838	0.010806	0.067135
0.033201	0.275713	0.480841	0.210244

MOTIF	Forebrain_E16.5_H3K27ac_45_74_0.535_1.140979e-46
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.172936	0.075654	0.720104	0.031306
0.78828	0.061798	0.08205	0.067872
0.016318	0.018404	0.931352	0.033926
0.116734	0.827588	0.049093	0.006584
0.039678	0.10192	0.030182	0.82822
0.004508	0.110605	0.788672	0.096215
0.028518	0.776406	0.06061	0.134466
0.013553	0.848806	0.111741	0.025899
0.716833	0.12721	0.090734	0.065223
0.051734	0.166633	0.642223	0.139411

MOTIF	Midbrain_E16.5_H3K27ac_56_104_0.528_2.105681e-48
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.859806	0.039649	0.050054	0.05049
0.010252	0.028701	0.890367	0.070681
0.208766	0.747203	0.039242	0.00479
0.05126	0.09517	0.08641	0.76716
0.02021	0.102673	0.854348	0.022769
0.124728	0.698882	0.034403	0.141987
0.001569	0.944172	0.036978	0.017281
0.825242	0.094099	0.0238	0.056858
0.018982	0.236598	0.633903	0.110517

MOTIF	Forebrain_E13.5_H3K4me2_94_131_0.504_1.183907e-26
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.720948	0.124344	0.055444	0.099263
0.004413	0.265485	0.713639	0.016462
0.025542	0.941294	0.022897	0.010267
0.0	0.036027	0.046491	0.917482
0.001184	0.020209	0.875615	0.102992
0.14703	0.777856	0.02662	0.048494
0.0	0.984866	0.015134	0.0
0.709751	0.058944	0.047685	0.183619
0.0	0.079646	0.896944	0.02341

MOTIF	Heart_E16.5_H3K4me2_74_138_0.520_1.706581e-52
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.704007	0.146392	0.025642	0.12396
0.014968	0.015391	0.95313	0.016511
0.006873	0.978261	0.014866	0.0
0.0	0.0	0.0	1.0
0.002192	0.031749	0.945743	0.020316
0.313172	0.315522	0.0	0.371306
0.0	0.981955	0.018045	0.0
0.878556	0.010694	0.088903	0.021846
0.0	0.176489	0.753815	0.069695

MOTIF	Hindbrain_E16.5_H3K4me2_106_136_0.502_1.012585e-43
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.010437	0.931084	0.05311	0.005369
0.767504	0.034409	0.175952	0.022135
0.012113	0.039438	0.852005	0.096444
0.005245	0.927963	0.023472	0.04332
0.019514	0.0	0.098877	0.881609
0.001643	0.05068	0.941926	0.005752
0.104528	0.353738	0.023522	0.518211
0.005774	0.942959	0.039502	0.011764
0.882773	0.034369	0.0	0.082858

MOTIF	Midbrain_E13.5_H3K4me2_100_141_0.509_4.230015e-29
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0199	0.92914	0.05096	0.0
0.02744	0.0	0.015928	0.956633
0.005934	0.010992	0.983073	0.0
0.208751	0.050847	0.607568	0.132834
0.245515	0.685407	0.069078	0.0
0.944903	0.052457	0.0	0.00264
0.036544	0.008786	0.926006	0.028664
0.03088	0.853226	0.095659	0.020235
0.095743	0.49981	0.013877	0.39057
0.210727	0.046569	0.742704	0.0

MOTIF	Neural-Tube_E15.5_H3K4me2_78_124_0.524_1.461837e-47
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.013882	0.924155	0.061963	0.0
0.076463	0.025992	0.007513	0.890031
0.011034	0.032861	0.956105	0.0
0.379213	0.040511	0.352399	0.227877
0.129449	0.832297	0.038255	0.0
0.877039	0.012677	0.037182	0.073102
0.020314	0.04068	0.912106	0.0269
0.040887	0.895678	0.049305	0.014131
0.103235	0.740671	0.054659	0.101435
0.277181	0.0	0.722819	0.0