MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Forebrain_E12.5_H3K9me3_101_169_0.506_8.370718e-10 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.743 0.234 0.001 0.022 0.001 0.001 0.001 0.997 0.001 0.97 0.028 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.765 0.233 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 MOTIF Forebrain_E13.5_H3K9me3_108_169_0.507_3.655005e-16 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.563 0.427 0.001 0.009 0.001 0.001 0.001 0.997 0.001 0.484 0.514 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.572 0.426 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 MOTIF Intestine_E14.5_H3K9me3_64_175_0.520_2.89257e-10 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.001 0.001 0.997 0.001 0.925 0.001 0.073 0.001 0.713 0.273 0.001 0.013 0.001 0.001 0.001 0.997 0.001 0.476 0.522 0.001 0.772 0.051 0.001 0.176 0.122 0.001 0.41 0.466 0.001 0.176 0.071 0.752 0.001 0.997 0.001 0.001 0.689 0.063 0.159 0.089 MOTIF Kidney_E15.5_H3K9me3_17_154_0.528_5.196557e-18 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.054 0.243 0.037 0.666 0.012 0.269 0.013 0.706 0.304 0.001 0.663 0.032 0.862 0.089 0.037 0.012 0.675 0.014 0.06 0.251 0.068 0.415 0.2 0.317 0.066 0.914 0.006 0.014 0.764 0.058 0.127 0.051 0.032 0.155 0.75 0.063 0.322 0.28 0.03 0.368 0.067 0.732 0.025 0.176 0.878 0.091 0.001 0.03 MOTIF Kidney_P0_H3K9me3_7_155_0.534_1.327086e-13 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.014 0.246 0.025 0.715 0.001 0.019 0.549 0.431 0.557 0.001 0.423 0.019 0.001 0.888 0.036 0.075 0.01 0.001 0.001 0.988 0.001 0.001 0.997 0.001 0.718 0.001 0.28 0.001 0.03 0.006 0.001 0.963 0.019 0.001 0.001 0.979 0.001 0.988 0.001 0.01 0.947 0.041 0.001 0.011 0.581 0.001 0.02 0.398 MOTIF Forebrain_E14.5_H3K9me3_67_156_0.512_1.280584e-07 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.719 0.001 0.279 0.001 0.115 0.253 0.001 0.631 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.367 0.001 0.631 0.049 0.419 0.001 0.531 0.997 0.001 0.001 0.001 MOTIF Limb_E12.5_H3K9me3_66_158_0.523_4.089398e-44 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.056 0.184 0.039 0.721 0.185 0.022 0.085 0.708 0.048 0.021 0.906 0.025 0.793 0.076 0.025 0.106 0.961 0.016 0.005 0.018 0.152 0.293 0.034 0.521 0.025 0.779 0.165 0.031 0.903 0.027 0.014 0.056 0.101 0.034 0.756 0.109 0.001 0.524 0.001 0.474 0.09 0.828 0.066 0.016 0.834 0.067 0.022 0.077 MOTIF Hindbrain_E14.5_H3K9me3_47_152_0.521_1.0969e-48 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.14 0.024 0.001 0.835 0.014 0.001 0.044 0.941 0.028 0.001 0.899 0.072 0.86 0.007 0.119 0.014 0.78 0.001 0.17 0.049 0.007 0.299 0.031 0.663 0.001 0.794 0.013 0.192 0.885 0.017 0.021 0.077 0.033 0.081 0.885 0.001 0.028 0.356 0.031 0.585 0.096 0.811 0.017 0.076 0.839 0.146 0.014 0.001 MOTIF Hindbrain_E13.5_H3K9me3_78_150_0.518_3.426363e-51 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.084 0.041 0.874 0.034 0.022 0.041 0.903 0.067 0.023 0.898 0.012 0.901 0.01 0.065 0.024 0.852 0.043 0.075 0.03 0.029 0.439 0.011 0.521 0.053 0.82 0.02 0.107 0.947 0.02 0.019 0.014 0.074 0.024 0.877 0.025 0.026 0.295 0.036 0.643 0.016 0.87 0.007 0.107 0.975 0.005 0.012 0.008 MOTIF Midbrain_E14.5_H3K9me3_74_152_0.512_3.592696e-15 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.064 0.001 0.022 0.913 0.022 0.001 0.976 0.001 0.631 0.088 0.28 0.001 0.001 0.904 0.001 0.094 0.022 0.022 0.001 0.955 0.001 0.022 0.976 0.001 0.672 0.005 0.322 0.001 0.001 0.214 0.001 0.784 0.001 0.126 0.001 0.872 0.05 0.861 0.001 0.088 0.994 0.004 0.001 0.001 0.851 0.001 0.147 0.001 MOTIF Cranio-Facial_E12.5_H3K9me3_92_151_0.507_1.165038e-15 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.063 0.001 0.031 0.905 0.001 0.031 0.967 0.001 0.593 0.001 0.405 0.001 0.031 0.937 0.031 0.001 0.001 0.031 0.063 0.905 0.107 0.063 0.767 0.063 0.486 0.001 0.481 0.031 0.031 0.074 0.001 0.894 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.83 0.001 0.063 0.106 0.937 0.031 0.001 0.031 MOTIF Lung_E14.5_H3K9me3_81_162_0.506_1.568783e-06 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.032 0.001 0.001 0.966 0.001 0.032 0.001 0.966 0.033 0.001 0.933 0.033 0.9 0.001 0.066 0.033 0.997 0.001 0.001 0.001 0.001 0.689 0.001 0.309 0.032 0.966 0.001 0.001 0.966 0.001 0.032 0.001 0.033 0.033 0.933 0.001 0.001 0.656 0.066 0.277 0.066 0.932 0.001 0.001 0.868 0.066 0.033 0.033 MOTIF Midbrain_E16.5_H3K9me3_14_150_0.528_1.176285e-39 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.018 0.008 0.029 0.945 0.018 0.024 0.025 0.933 0.036 0.008 0.942 0.014 0.958 0.001 0.026 0.015 0.897 0.022 0.052 0.029 0.039 0.7 0.001 0.26 0.02 0.945 0.004 0.031 0.98 0.004 0.008 0.008 0.03 0.025 0.933 0.012 0.008 0.717 0.008 0.267 0.011 0.959 0.016 0.014 0.983 0.001 0.008 0.008 MOTIF Cranio-Facial_E13.5_H3K9me3_67_152_0.516_2.6934e-30 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.348 0.001 0.65 0.001 0.952 0.001 0.046 0.997 0.001 0.001 0.001 0.041 0.001 0.957 0.001 0.001 0.313 0.001 0.685 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 MOTIF Kidney_E16.5_H3K9me3_67_156_0.520_3.18652e-35 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.68 0.001 0.318 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.69 0.001 0.308 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.919 0.001 0.079 0.001 MOTIF Limb_E13.5_H3K9me3_90_152_0.516_5.170004e-47 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.006 0.029 0.003 0.962 0.001 0.015 0.001 0.983 0.008 0.001 0.99 0.001 0.964 0.001 0.034 0.001 0.954 0.001 0.04 0.005 0.004 0.076 0.001 0.919 0.001 0.989 0.001 0.009 0.992 0.002 0.001 0.005 0.008 0.001 0.984 0.007 0.001 0.088 0.003 0.908 0.001 0.955 0.001 0.043 0.997 0.001 0.001 0.001 MOTIF Heart_E14.5_H3K9me3_94_162_0.509_1.633561e-24 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.003 0.001 0.995 0.021 0.001 0.977 0.001 0.957 0.011 0.031 0.001 0.004 0.991 0.004 0.001 0.001 0.001 0.001 0.997 0.02 0.001 0.968 0.011 0.933 0.001 0.065 0.001 0.002 0.058 0.015 0.925 0.001 0.028 0.001 0.97 0.001 0.988 0.001 0.01 0.957 0.034 0.002 0.007 0.949 0.015 0.035 0.001 MOTIF Neural-Tube_E15.5_H3K9me3_77_150_0.515_1.601392e-14 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.005 0.035 0.005 0.955 0.006 0.005 0.016 0.973 0.022 0.004 0.973 0.001 0.981 0.001 0.017 0.001 0.941 0.003 0.055 0.001 0.016 0.037 0.001 0.946 0.001 0.987 0.001 0.011 0.984 0.005 0.005 0.006 0.005 0.013 0.981 0.001 0.001 0.066 0.001 0.932 0.006 0.972 0.005 0.017 0.991 0.004 0.004 0.001 MOTIF Forebrain_E16.5_H3K9me3_22_156_0.530_2.504162e-15 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.254 0.299 0.001 0.446 0.287 0.001 0.653 0.059 0.942 0.043 0.014 0.001 0.344 0.015 0.014 0.627 0.014 0.157 0.061 0.768 0.063 0.692 0.227 0.018 0.968 0.014 0.017 0.001 0.304 0.023 0.641 0.032 0.009 0.291 0.006 0.694 0.128 0.802 0.031 0.039 0.825 0.001 0.014 0.16 0.006 0.053 0.883 0.058 MOTIF Cranio-Facial_E15.5_H3K9me3_16_162_0.524_2.827395e-09 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.485 0.041 0.021 0.454 0.156 0.015 0.749 0.08 0.452 0.119 0.163 0.267 0.41 0.009 0.093 0.488 0.246 0.219 0.032 0.503 0.165 0.466 0.361 0.008 0.676 0.183 0.017 0.124 0.407 0.016 0.398 0.18 0.041 0.365 0.119 0.476 0.194 0.472 0.186 0.147 0.538 0.061 0.082 0.319 0.125 0.163 0.621 0.091 MOTIF Heart_E11.5_H3K9me3_56_163_0.519_1.056983e-15 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.239 0.014 0.184 0.563 0.026 0.207 0.738 0.029 0.608 0.175 0.118 0.099 0.519 0.187 0.096 0.198 0.327 0.29 0.031 0.352 0.031 0.591 0.247 0.131 0.676 0.016 0.098 0.21 0.21 0.026 0.535 0.229 0.104 0.332 0.113 0.451 0.104 0.488 0.247 0.161 0.804 0.063 0.102 0.031 0.105 0.168 0.703 0.024 MOTIF Heart_P0_H3K9me3_69_167_0.516_2.216044e-20 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.537 0.085 0.019 0.359 0.059 0.01 0.859 0.072 0.815 0.065 0.046 0.074 0.841 0.004 0.082 0.073 0.203 0.304 0.082 0.411 0.186 0.39 0.387 0.038 0.872 0.019 0.045 0.064 0.022 0.012 0.843 0.123 0.001 0.533 0.001 0.465 0.025 0.919 0.034 0.022 0.914 0.03 0.008 0.048 0.107 0.01 0.847 0.036 MOTIF Limb_E15.5_H3K9me3_62_156_0.513_3.99931e-06 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.072 0.74 0.075 0.113 0.001 0.001 0.088 0.91 0.22 0.089 0.641 0.05 0.536 0.061 0.36 0.043 0.203 0.592 0.098 0.107 0.033 0.041 0.055 0.871 0.106 0.327 0.484 0.083 0.669 0.001 0.292 0.038 0.155 0.088 0.051 0.706 0.001 0.043 0.14 0.816 0.001 0.876 0.051 0.072 0.563 0.004 0.001 0.432 MOTIF Forebrain_P0_H3K9me3_25_153_0.529_1.259865e-26 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.052 0.131 0.706 0.111 0.811 0.116 0.058 0.015 0.595 0.083 0.196 0.126 0.105 0.292 0.085 0.518 0.065 0.573 0.294 0.068 0.749 0.063 0.088 0.1 0.11 0.109 0.599 0.182 0.081 0.352 0.048 0.519 0.147 0.591 0.142 0.12 0.866 0.061 0.054 0.019 0.094 0.143 0.645 0.118 0.317 0.566 0.06 0.057 MOTIF Forebrain_E15.5_H3K9me3_58_165_0.519_3.254161e-07 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.128 0.125 0.696 0.051 0.813 0.072 0.071 0.044 0.718 0.028 0.113 0.141 0.101 0.272 0.084 0.543 0.042 0.639 0.289 0.03 0.863 0.017 0.011 0.109 0.044 0.034 0.874 0.048 0.034 0.362 0.079 0.525 0.068 0.789 0.049 0.094 0.835 0.023 0.02 0.122 0.037 0.055 0.82 0.088 0.324 0.569 0.011 0.096 MOTIF Lung_E16.5_H3K9me3_59_162_0.523_3.617564e-21 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.109 0.128 0.736 0.027 0.956 0.001 0.038 0.005 0.887 0.036 0.037 0.04 0.001 0.361 0.086 0.552 0.093 0.604 0.179 0.124 0.846 0.045 0.049 0.06 0.096 0.113 0.685 0.106 0.027 0.482 0.022 0.47 0.115 0.829 0.027 0.029 0.825 0.022 0.018 0.135 0.128 0.034 0.778 0.06 0.307 0.616 0.045 0.032 MOTIF Neural-Tube_E13.5_H3K9me3_35_151_0.530_1.64051e-54 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.455 0.001 0.001 0.543 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.853 0.001 0.001 0.145 0.001 0.327 0.001 0.671 0.001 0.482 0.412 0.105 0.806 0.001 0.053 0.14 0.177 0.009 0.813 0.001 0.001 0.494 0.001 0.504 0.033 0.752 0.001 0.214 0.929 0.001 0.069 0.001 0.278 0.001 0.72 0.001 MOTIF Midbrain_E16.5_H3K9me3_18_3_0.527_7.062133e-55 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.028494 0.032011 0.749411 0.190084 0.113934 0.872702 0.011353 0.002011 0.012672 0.016322 0.003799 0.967207 0.005541 0.034743 0.944084 0.015632 0.856005 0.019497 0.087104 0.037393 0.02339 0.9288 0.013478 0.034332 0.034911 0.031428 0.003543 0.930118 0.048661 0.363942 0.585132 0.002264 0.830109 0.019237 0.05594 0.094713 0.162389 0.11333 0.026386 0.697894 0.067572 0.0 0.034003 0.898426 0.0 0.979597 0.020403 0.0 MOTIF Midbrain_E15.5_H3K9me3_82_157_0.516_6.801502e-08 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.997 0.001 0.933 0.001 0.065 0.001 0.741 0.001 0.199 0.059 0.001 0.2 0.001 0.798 0.049 0.654 0.295 0.002 0.958 0.04 0.001 0.001 0.04 0.001 0.93 0.029 0.001 0.504 0.001 0.494 0.001 0.962 0.001 0.036 0.935 0.001 0.041 0.023 0.062 0.03 0.854 0.054 0.263 0.735 0.001 0.001 MOTIF Midbrain_P0_H3K9me3_44_150_0.522_1.208078e-12 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.013 0.937 0.037 0.013 0.012 0.025 0.001 0.962 0.029 0.001 0.969 0.001 0.488 0.001 0.51 0.001 0.013 0.956 0.013 0.018 0.001 0.025 0.012 0.962 0.001 0.327 0.671 0.001 0.519 0.001 0.479 0.001 0.012 0.017 0.001 0.97 0.012 0.049 0.001 0.938 0.001 0.986 0.012 0.001 0.647 0.001 0.025 0.327 MOTIF Hindbrain_P0_H3K9me3_19_154_0.526_3.435747e-22 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.997 0.001 0.001 0.978 0.001 0.02 0.001 0.001 0.001 0.997 0.006 0.001 0.992 0.001 0.565 0.002 0.426 0.007 0.006 0.992 0.001 0.001 0.002 0.001 0.001 0.996 0.005 0.03 0.959 0.006 0.687 0.001 0.311 0.001 0.001 0.001 0.001 0.997 0.006 0.001 0.001 0.992 0.001 0.997 0.001 0.001 MOTIF Hindbrain_E12.5_H3K9me3_77_154_0.517_4.192212e-35 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.256 0.001 0.742 0.001 0.847 0.151 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.215 0.001 0.783 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.151 0.847 0.001 0.001 MOTIF Cranio-Facial_E14.5_H3K9me3_62_153_0.519_1.924731e-58 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.207 0.001 0.791 0.001 0.761 0.237 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.286 0.001 0.712 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.229 0.769 0.001 0.001 MOTIF Midbrain_E13.5_H3K9me3_38_150_0.529_1.100666e-36 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.239 0.001 0.759 0.001 0.755 0.243 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.262 0.001 0.736 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.243 0.755 0.001 0.001 MOTIF Neural-Tube_E12.5_H3K9me3_75_157_0.516_1.852503e-38 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.077 0.001 0.921 0.001 0.75 0.248 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.04 0.001 0.958 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.248 0.75 0.001 0.001 MOTIF Neural-Tube_E14.5_H3K9me3_56_160_0.513_0.002313652 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.061 0.061 0.877 0.001 0.982 0.001 0.001 0.016 0.912 0.001 0.071 0.016 0.018 0.001 0.001 0.98 0.001 0.98 0.001 0.018 0.964 0.001 0.034 0.001 0.018 0.001 0.98 0.001 0.016 0.001 0.001 0.982 0.001 0.947 0.026 0.026 0.997 0.001 0.001 0.001 0.078 0.027 0.882 0.013 0.001 0.94 0.015 0.044 MOTIF Stomach_E14.5_H3K9me3_63_154_0.512_8.147035e-08 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.001 0.01 0.988 0.001 0.942 0.001 0.056 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.988 0.001 0.001 0.01 0.024 0.001 0.965 0.01 0.001 0.001 0.001 0.997 0.001 0.997 0.001 0.001 0.988 0.001 0.01 0.001 0.001 0.001 0.959 0.039 0.001 0.997 0.001 0.001