MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Forebrain_P0_H3K9me3_27_130_0.528_3.015008e-08 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.443166 0.144463 0.389389 0.022981 0.119507 0.785341 0.051738 0.043414 0.7258 0.114606 0.023376 0.136218 0.672434 0.022823 0.211438 0.093304 0.133346 0.111765 0.723285 0.031604 0.925125 0.012373 0.04573 0.016772 0.092683 0.117696 0.781702 0.007919 0.098614 0.874602 0.01579 0.010994 0.959719 0.013387 0.002234 0.02466 0.078054 0.009376 0.90086 0.01171 MOTIF Midbrain_E16.5_H3K9me3_23_92_0.526_8.445762e-15 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.056042 0.178453 0.765505 0.0 0.047219 0.902057 0.009266 0.041458 0.829187 0.027558 0.007056 0.136199 0.617356 0.005718 0.305574 0.071351 0.230497 0.027017 0.725317 0.01717 0.94167 0.004911 0.043721 0.009698 0.009203 0.040391 0.931207 0.0192 0.182382 0.80212 0.001085 0.014412 0.981304 0.012513 0.000356 0.005827 0.071196 0.0 0.873395 0.055409 0.0 0.544643 0.248777 0.206579 MOTIF Heart_E14.5_H3K9me3_29_181_0.534_3.413696e-35 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.831 0.001 0.001 0.167 0.997 0.001 0.001 0.001 0.001 0.001 0.867 0.131 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.969 0.001 0.029 0.001 MOTIF Intestine_E14.5_H3K9me3_22_181_0.536_4.656492e-18 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.252 0.001 0.746 0.001 0.997 0.001 0.001 0.001 0.001 0.001 0.997 0.001 0.001 0.997 0.001 0.001 0.966 0.001 0.032 0.001 MOTIF Midbrain_E14.5_H3K9me3_29_120_0.523_1.567465e-10 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.177885 0.822115 0.0 0.176069 0.719035 0.035059 0.069837 0.571778 0.0 0.014769 0.413453 0.900954 0.011103 0.067677 0.020266 0.012699 0.039779 0.947522 0.0 0.929995 0.004136 0.031494 0.034375 0.0 0.024281 0.973017 0.002702 0.061357 0.924541 0.0 0.014102 0.944003 0.026391 0.016683 0.012922 MOTIF Stomach_E14.5_H3K9me3_15_104_0.531_4.796366e-09 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.011743 0.988257 0.0 0.037632 0.929641 0.025072 0.007655 0.0 0.044089 0.002445 0.953466 0.024484 0.876592 0.034577 0.064346 0.009167 0.025119 0.021455 0.94426 0.35554 0.034322 0.044267 0.565872 0.352683 0.022826 0.624491 0.0 0.040657 0.91581 0.043533 0.0 0.840164 0.0 0.095336 0.0645 MOTIF Heart_P0_H3K9me3_11_86_0.535_6.009449e-28 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.004571 0.977665 0.017765 0.0 0.8674 0.02322 0.109379 0.012196 0.023222 0.008822 0.95576 0.028068 0.680344 0.034816 0.256771 0.004474 0.055106 0.008926 0.931494 0.145256 0.006488 0.039144 0.809112 0.008621 0.199928 0.766372 0.025079 0.043278 0.780276 0.023118 0.153328 0.9347 0.028358 0.003673 0.033269 MOTIF Heart_P0_H3K9me3_31_107_0.525_1.631144e-20 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.164215 0.046961 0.783358 0.005466 0.013399 0.939075 0.036223 0.011303 0.922521 0.007078 0.00026 0.070141 0.815855 0.046549 0.128032 0.009564 0.402915 0.100211 0.385654 0.11122 0.825748 0.008921 0.156807 0.008523 0.046677 0.008904 0.936801 0.007618 0.066673 0.896803 0.018849 0.017675 0.924251 0.009947 0.047366 0.018435 0.155973 0.030292 0.362478 0.451257 MOTIF Stomach_E14.5_H3K9me3_33_133_0.523_2.51888e-10 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.040325 0.018536 0.929813 0.011325 0.062747 0.66395 0.242214 0.031089 0.75801 0.049199 0.08744 0.105351 0.926638 0.03776 0.025759 0.009843 0.123937 0.183523 0.563261 0.129279 0.874603 0.018506 0.057554 0.049337 0.020718 0.017457 0.949199 0.012625 0.068306 0.881729 0.034023 0.015943 0.861691 0.023031 0.005225 0.110054 0.179732 0.0 0.364302 0.455966 MOTIF Lung_P0_H3K9me3_29_130_0.523_5.88437e-05 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.844747 0.077541 0.0 0.077712 0.97339 0.001787 0.0 0.024823 0.080881 0.053293 0.847284 0.018542 0.909292 0.063028 0.0 0.02768 0.245128 0.169944 0.423569 0.161359 0.025456 0.946029 0.005324 0.023192 0.712291 0.021815 0.220532 0.045361 0.013273 0.021756 0.92618 0.038792 0.063808 0.86682 0.0 0.069371 MOTIF Forebrain_E14.5_H3K9me3_79_127_0.510_3.773994e-06 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.803605 0.039828 0.000748 0.155819 0.764291 0.059312 0.051343 0.125054 0.202681 0.081526 0.708109 0.007684 0.867259 0.043739 0.055892 0.033111 0.03367 0.150501 0.748145 0.067683 0.054155 0.930448 0.004197 0.011201 0.925546 0.040184 0.005584 0.028685 0.021107 0.005386 0.935686 0.037821 0.0 0.775341 0.192998 0.031661 MOTIF Limb_E15.5_H3K9me3_60_146_0.514_6.0951e-05 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.833545 0.02745 0.054575 0.08443 0.753207 0.064124 0.1493 0.033369 0.100524 0.179315 0.691442 0.028719 0.91546 0.031474 0.02403 0.029035 0.032791 0.206905 0.651722 0.108582 0.054511 0.841546 0.035531 0.068412 0.820827 0.075441 0.038972 0.06476 0.016949 0.003577 0.910838 0.068636 0.017876 0.884099 0.049197 0.048827 0.366536 0.486493 0.042667 0.104304 MOTIF Forebrain_E13.5_H3K9me3_91_114_0.513_4.997317e-07 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.762107 0.070201 0.167692 0.0 0.844108 0.071115 0.062843 0.021934 0.188215 0.025995 0.769001 0.016789 0.979625 0.01113 0.00642 0.002824 0.297925 0.053861 0.627745 0.020469 0.00072 0.990117 0.0 0.009164 0.872233 0.065645 0.042222 0.019899 0.125029 0.022621 0.85235 0.0 0.005482 0.835264 0.120084 0.03917 MOTIF Heart_E13.5_H3K9me3_68_98_0.525_1.96165e-32 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.744131 0.189727 0.05926 0.006882 0.925482 0.018881 0.055636 0.0 0.061872 0.0769 0.84159 0.019638 0.940511 0.003286 0.035879 0.020324 0.204912 0.192556 0.566792 0.03574 0.103021 0.879332 0.017647 0.0 0.967657 0.002385 0.012489 0.01747 0.127173 0.077903 0.774693 0.020232 0.008659 0.863377 0.02976 0.098204 0.552543 0.210102 0.031941 0.205414 MOTIF Heart_E16.5_H3K9me3_22_66_0.544_2.894533e-91 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.831107 0.076805 0.059473 0.032616 0.807477 0.006133 0.154841 0.031549 0.145747 0.128347 0.691005 0.0349 0.928157 0.009837 0.044494 0.017512 0.077104 0.118287 0.757612 0.046997 0.084249 0.85891 0.019762 0.037079 0.867884 0.047869 0.015211 0.069035 0.074458 0.052639 0.857358 0.015545 0.072342 0.721421 0.077895 0.128342 0.265498 0.458379 0.230912 0.045212 0.611482 0.125625 0.090766 0.172127 MOTIF Liver_E13.5_H3K9me3_59_116_0.508_7.614751e-07 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.794088 0.075669 0.10818 0.022062 0.91217 0.009605 0.050307 0.027919 0.035103 0.066773 0.854872 0.043251 0.910061 0.045224 0.03065 0.014065 0.14815 0.151027 0.687624 0.013199 0.074065 0.860805 0.014703 0.050427 0.771796 0.108131 0.055953 0.06412 0.051571 0.020796 0.855712 0.071921 0.026824 0.78917 0.146477 0.037529 0.347251 0.436676 0.129539 0.086534 0.595803 0.092604 0.066339 0.245254 MOTIF Neural-Tube_E12.5_H3K9me3_90_113_0.511_2.866702e-12 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.721208 0.05646 0.200091 0.02224 0.877163 0.018904 0.073367 0.030566 0.133231 0.057488 0.770697 0.038584 0.928661 0.020763 0.035349 0.015227 0.260705 0.216057 0.49684 0.026397 0.069481 0.915568 0.012511 0.00244 0.929746 0.012847 0.036558 0.020849 0.054067 0.001442 0.922699 0.021792 0.076921 0.788446 0.109505 0.025128 0.374292 0.339118 0.149504 0.137086 MOTIF Limb_E13.5_H3K9me3_84_81_0.518_1.932135e-40 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.781914 0.056633 0.145458 0.015995 0.911815 0.005688 0.060926 0.021571 0.109145 0.139694 0.737082 0.014079 0.890774 0.013982 0.049275 0.045969 0.183704 0.079025 0.704078 0.033193 0.004837 0.928498 0.031286 0.035378 0.937729 0.010862 0.017105 0.034304 0.042871 0.065971 0.843897 0.047262 0.070875 0.595717 0.108821 0.224587 0.252404 0.265997 0.374377 0.107221 MOTIF Hindbrain_E11.5_H3K9me3_27_119_0.526_6.601084e-05 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.790227 0.039778 0.046938 0.123056 0.646969 0.011595 0.211281 0.130154 0.051056 0.223338 0.709415 0.01619 0.937577 0.023961 0.018732 0.019731 0.042827 0.024013 0.923981 0.009179 0.058511 0.818724 0.039134 0.083632 0.859663 0.004205 0.007905 0.128227 0.031317 0.022813 0.866854 0.079016 0.036345 0.868363 0.064202 0.031091 MOTIF Limb_E11.5_H3K9me3_19_76_0.529_4.036701e-09 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.630145 0.188086 0.099126 0.082643 0.805717 0.048369 0.101643 0.04427 0.110674 0.068727 0.780669 0.039931 0.769822 0.037084 0.174421 0.018674 0.107997 0.072142 0.808604 0.011258 0.051207 0.937301 0.007499 0.003994 0.883355 0.025733 0.032724 0.058188 0.01985 0.064877 0.866293 0.04898 0.084367 0.819322 0.074578 0.021733 MOTIF Intestine_E16.5_H3K9me3_20_114_0.549_2.746788e-21 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.817426 0.12611 0.046565 0.009899 0.761477 0.011657 0.130528 0.096337 0.097951 0.181308 0.707806 0.012934 0.910826 0.018833 0.036656 0.033685 0.079185 0.026815 0.875256 0.018744 0.114847 0.855483 0.007023 0.022647 0.913114 0.013297 0.013477 0.060112 0.042902 0.087063 0.833497 0.036537 0.027126 0.657082 0.111364 0.204428 MOTIF Heart_E11.5_H3K9me3_18_78_0.535_6.659297e-21 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.797358 0.118463 0.054214 0.029965 0.779499 0.005322 0.182674 0.032504 0.103631 0.160856 0.707569 0.027943 0.900884 0.012236 0.049411 0.037469 0.096354 0.090534 0.796189 0.016923 0.067969 0.878866 0.021015 0.032151 0.931963 0.01241 0.014343 0.041283 0.066172 0.07907 0.819049 0.035709 0.074886 0.700744 0.070645 0.153726 MOTIF Kidney_E16.5_H3K9me3_19_105_0.537_6.280085e-32 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.803414 0.094048 0.05532 0.047219 0.814864 0.0022 0.144973 0.037963 0.159611 0.112745 0.706738 0.020906 0.939333 0.015463 0.023851 0.021352 0.149316 0.076493 0.75058 0.023612 0.055964 0.871723 0.021642 0.05067 0.883269 0.033018 0.013384 0.070329 0.084458 0.046023 0.854755 0.014764 0.066924 0.710333 0.056124 0.16662 MOTIF Kidney_E14.5_H3K9me3_24_70_0.532_2.404986e-19 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.81715 0.091772 0.072704 0.018374 0.782529 0.019778 0.137267 0.060426 0.116109 0.134431 0.725212 0.024247 0.911022 0.031447 0.046899 0.010632 0.122575 0.081088 0.757834 0.038503 0.066065 0.893281 0.012184 0.02847 0.869605 0.035062 0.033542 0.061791 0.05995 0.053409 0.853359 0.033282 0.09497 0.784005 0.076055 0.04497 MOTIF Lung_E14.5_H3K9me3_20_124_0.529_2.689476e-09 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.806829 0.111223 0.059988 0.02196 0.73742 0.035893 0.162804 0.063883 0.151562 0.173483 0.62112 0.053835 0.849586 0.044655 0.055546 0.050213 0.129981 0.082045 0.762257 0.025717 0.031297 0.933895 0.015633 0.019176 0.867191 0.014132 0.072995 0.045682 0.056449 0.023204 0.897723 0.022623 0.126611 0.77509 0.036251 0.062048 MOTIF Limb_E14.5_H3K9me3_21_106_0.530_3.333251e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.764109 0.149112 0.043017 0.043762 0.881831 0.01191 0.065285 0.040973 0.142107 0.193816 0.621266 0.042811 0.911564 0.016701 0.035682 0.036053 0.183018 0.107097 0.664321 0.045564 0.03514 0.931774 0.019227 0.013859 0.944461 0.002834 0.029309 0.023396 0.031654 0.061067 0.877115 0.030164 0.030214 0.845176 0.072778 0.051833 MOTIF Forebrain_E12.5_H3K9me3_88_134_0.512_3.661093e-05 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.72866 0.133589 0.074845 0.062906 0.787647 0.02576 0.141571 0.045022 0.129229 0.211862 0.647352 0.011558 0.900505 0.022187 0.044366 0.032942 0.192848 0.070352 0.713557 0.023243 0.100564 0.869707 0.027419 0.00231 0.962885 0.002239 0.009025 0.025851 0.056044 0.005658 0.917784 0.020514 0.043924 0.827361 0.092136 0.036579 MOTIF Stomach_E14.5_H3K9me3_12_122_0.534_1.133238e-12 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.698544 0.173226 0.054512 0.073718 0.781475 0.00807 0.175712 0.034742 0.137179 0.180376 0.665136 0.017309 0.889863 0.037803 0.035174 0.03716 0.15625 0.065292 0.733327 0.045131 0.046588 0.915101 0.024468 0.013843 0.883422 0.014331 0.0544 0.047846 0.032074 0.025938 0.927654 0.014334 0.075023 0.799631 0.059217 0.066129 MOTIF Liver_E15.5_H3K9me3_22_120_0.518_4.927055e-07 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0514 0.05326 0.866207 0.029132 0.879715 0.064562 0.019424 0.0363 0.199977 0.017322 0.776339 0.006362 0.079787 0.776781 0.1105 0.032932 0.82717 0.085005 0.087825 0.0 0.007593 0.03897 0.923692 0.029746 0.176079 0.772932 0.019004 0.031984 0.013797 0.75411 0.056611 0.175483 0.707778 0.020852 0.227648 0.043723 MOTIF Heart_E14.5_H3K9me3_67_132_0.521_2.062926e-16 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.764899 0.022489 0.20985 0.002762 0.233793 0.021774 0.735598 0.008835 0.922644 0.033209 0.012792 0.031355 0.160654 0.142805 0.678703 0.017837 0.03799 0.822267 0.080892 0.05885 0.841502 0.037013 0.03397 0.087515 0.002262 0.0 0.98609 0.011648 0.117227 0.80058 0.061307 0.020886 0.057928 0.782467 0.014901 0.144704 MOTIF Heart_E11.5_H3K9me3_42_130_0.525_3.490251e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.731975 0.000849 0.163235 0.103941 0.092389 0.052717 0.843729 0.011165 0.923689 0.01903 0.028859 0.028423 0.126738 0.114807 0.757312 0.001143 0.060032 0.907682 0.020209 0.012077 0.851478 0.030125 0.0215 0.096897 0.01103 0.008641 0.957436 0.022894 0.109504 0.790454 0.046649 0.053393 0.163091 0.594092 0.132847 0.109971 MOTIF Kidney_E14.5_H3K9me3_30_99_0.531_2.079669e-15 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.694878 0.025716 0.173265 0.106141 0.119992 0.04764 0.812655 0.019713 0.902149 0.078957 0.003692 0.015202 0.1485 0.074371 0.752274 0.024855 0.051534 0.928421 0.012404 0.007641 0.69861 0.132033 0.043385 0.125972 0.01086 0.008543 0.947358 0.033239 0.034571 0.892839 0.06112 0.01147 0.157528 0.720701 0.025993 0.095778 MOTIF Liver_E16.5_H3K9me3_32_117_0.535_2.449692e-10 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.566674 0.006645 0.231978 0.194703 0.132613 0.029537 0.817468 0.020382 0.90222 0.023033 0.058755 0.015992 0.134257 0.005309 0.850928 0.009505 0.121795 0.818499 0.014 0.045706 0.789047 0.02747 0.086721 0.096762 0.01414 0.015889 0.952036 0.017935 0.023611 0.907958 0.045678 0.022753 0.044283 0.726079 0.121731 0.107908 MOTIF Lung_E16.5_H3K9me3_31_82_0.540_4.772135e-24 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.898552 0.052606 0.042405 0.006437 0.169919 0.023624 0.801349 0.005108 0.920904 0.022051 0.027865 0.029181 0.185963 0.044922 0.761094 0.008021 0.009647 0.951139 0.014852 0.024362 0.674947 0.182468 0.057616 0.084969 0.058467 0.012227 0.883928 0.045378 0.125278 0.806545 0.034403 0.033774 0.053472 0.709891 0.146232 0.090405 0.577545 0.250983 0.101029 0.070443 MOTIF Stomach_E16.5_H3K9me3_34_126_0.530_2.288754e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.882278 0.019591 0.098131 0.0 0.132292 0.026939 0.818211 0.022559 0.884756 0.061665 0.026844 0.026735 0.13719 0.030698 0.832112 0.0 0.015657 0.93606 0.024324 0.023959 0.852023 0.055282 0.021647 0.071048 0.014553 0.009387 0.956956 0.019104 0.1469 0.742214 0.071867 0.039019 0.25671 0.539046 0.106609 0.097634 MOTIF Cranio-Facial_E15.5_H3K9me3_71_149_0.510_1.319584e-05 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.058309 0.921163 0.0 0.020528 0.370799 0.00597 0.031468 0.591764 0.007115 0.027284 0.923014 0.042588 0.030373 0.858819 0.066872 0.043936 0.022987 0.09426 0.004663 0.878089 0.0 0.859749 0.120438 0.019813 0.000906 0.031686 0.026531 0.940877 0.115737 0.010879 0.064439 0.808945 0.171392 0.609921 0.207808 0.010879 MOTIF Stomach_E16.5_H3K9me3_60_118_0.520_3.392209e-21 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.106548 0.526208 0.361545 0.0057 0.850766 0.0 0.066117 0.083117 0.973422 0.025456 0.0 0.001122 0.02152 0.025645 0.951234 0.001601 0.909331 0.047894 0.023979 0.018796 0.136457 0.0 0.835558 0.027985 0.157886 0.831882 0.0 0.010232 0.972965 0.011215 0.006836 0.008983 0.017111 0.0 0.969596 0.013294