MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Neural-Tube_E11.5_H3K36me3_109_168_0.509_9.443917e-07 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.804 0.001 0.194 0.001 0.001 0.997 0.001 0.001 0.001 0.997 0.001 0.001 0.001 0.853 0.001 0.145 0.001 0.001 0.001 0.997 0.997 0.001 0.001 0.001 0.001 0.101 0.001 0.897 0.079 0.001 0.919 0.001 MOTIF Hindbrain_P0_H3K9me3_30_1_0.523_4.957995e-08 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.066366 0.007596 0.917134 0.008904 0.971393 0.003948 0.010663 0.013997 0.921377 0.014209 0.040544 0.02387 0.900484 0.013516 0.080768 0.005232 0.052832 0.885901 0.038606 0.022661 0.008387 0.893758 0.065879 0.031976 0.291765 0.270924 0.073714 0.363597 0.004605 0.127289 0.018405 0.849701 0.94443 0.006762 0.033457 0.015351 0.11098 0.337867 0.00699 0.544163 0.23579 0.018209 0.728419 0.017581 MOTIF Cranio-Facial_E12.5_H3K9me3_85_1_0.509_2.048271e-15 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.0 0.000896 0.990637 0.008467 0.994145 0.0 0.0 0.005855 0.90053 0.009364 0.084177 0.005929 0.933301 0.011096 0.043594 0.012008 0.0 0.918496 0.063982 0.017522 0.133221 0.847756 0.016297 0.002726 0.271588 0.37644 0.097555 0.254416 0.027906 0.116715 0.01109 0.844289 0.859191 0.007487 0.10299 0.030332 0.081684 0.255911 0.240127 0.422278 0.27361 0.332864 0.393526 0.0 MOTIF Midbrain_E16.5_H3K9me3_85_1_0.510_4.700933e-11 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.10385 0.000757 0.870787 0.024606 0.894613 0.035529 0.014789 0.055069 0.937501 0.01914 0.012184 0.031176 0.837478 0.014506 0.132403 0.015613 0.067085 0.775066 0.128025 0.029824 0.003541 0.889318 0.028133 0.079008 0.233125 0.53858 0.079127 0.149168 0.011624 0.099104 0.00931 0.879962 0.958542 0.000818 0.010298 0.030343 0.069233 0.260566 0.218132 0.452069 0.463855 0.272915 0.261842 0.001388 MOTIF Neural-Tube_E13.5_H3K9me3_68_5_0.521_1.354974e-60 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.162903 0.009092 0.801362 0.026643 0.90939 0.022594 0.01016 0.057856 0.910276 0.008518 0.055577 0.025629 0.88563 0.007316 0.101542 0.005513 0.03803 0.856136 0.077545 0.02829 0.027172 0.900985 0.01079 0.061054 0.24556 0.622921 0.045174 0.086345 0.058259 0.084804 0.018093 0.838843 0.928741 0.0 0.029955 0.041305 0.223187 0.173034 0.0 0.603779 0.317406 0.348005 0.334589 0.0 MOTIF Forebrain_E11.5_H3K9me3_58_1_0.515_6.670146e-15 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.110275 0.006373 0.874586 0.008765 0.952239 0.029428 0.010725 0.007608 0.829405 0.038338 0.123939 0.008318 0.7593 0.021493 0.205314 0.013894 0.019735 0.913711 0.055699 0.010856 0.011902 0.94367 0.014553 0.029875 0.1875 0.581117 0.104366 0.127017 0.005752 0.052968 0.079059 0.862221 0.848769 0.060085 0.060888 0.030258 0.088031 0.184183 0.109988 0.617798 0.17933 0.320391 0.492556 0.007724 MOTIF Neural-Tube_E14.5_H3K9me3_15_2_0.527_6.734295e-07 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.077186 0.012936 0.897508 0.01237 0.86298 0.029282 0.061111 0.046627 0.927909 0.032051 0.02474 0.0153 0.810296 0.010048 0.166308 0.013347 0.021498 0.938 0.014005 0.026498 0.083317 0.818665 0.033502 0.064515 0.18413 0.546709 0.130267 0.138894 0.026887 0.154587 0.019969 0.798557 0.906035 0.033742 0.045935 0.014289 0.16269 0.104827 0.080739 0.651744 0.172525 0.151411 0.635015 0.041048 0.600579 0.153736 0.132162 0.113523 MOTIF Hindbrain_E16.5_H3K9me3_94_4_0.510_1.94414e-14 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.976574 0.020811 0.002614 0.0 0.938687 0.0 0.058256 0.003057 0.805973 0.0 0.194027 0.0 0.0 0.919003 0.080997 0.0 0.007676 0.964241 0.024796 0.003287 0.140205 0.635767 0.085078 0.13895 0.065661 0.023542 0.006854 0.903943 0.948242 0.016372 0.035385 0.0 0.003768 0.33612 0.01037 0.649742 0.645809 0.020726 0.333465 0.0 MOTIF Heart_E11.5_H3K9me3_65_2_0.516_5.92084e-14 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.121664 0.002302 0.824414 0.051621 0.987204 0.012512 0.000284 0.0 0.948373 0.010657 0.030464 0.010506 0.805864 0.006901 0.16871 0.018526 0.013203 0.825147 0.156286 0.005364 0.022786 0.886854 0.072158 0.018201 0.022908 0.568885 0.145084 0.263123 0.026627 0.067698 0.014708 0.890966 0.923159 0.011776 0.001227 0.063839 0.198833 0.405603 0.0 0.395565 MOTIF Liver_P0_H3K9me3_98_4_0.507_4.578189e-07 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.114287 0.018359 0.809449 0.057905 0.970988 0.008894 0.004761 0.015357 0.845006 0.009806 0.085758 0.05943 0.847118 0.012612 0.123357 0.016913 0.013901 0.839768 0.081175 0.065156 0.065736 0.892339 0.020624 0.021301 0.106187 0.653151 0.060674 0.179988 0.010493 0.080432 0.049623 0.859452 0.776779 0.022042 0.051548 0.149631 0.082979 0.403311 0.046478 0.467233 MOTIF Forebrain_E15.5_H3K9me3_28_1_0.527_2.558817e-25 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.129028 0.0169 0.845667 0.008405 0.879334 0.050414 0.011413 0.058839 0.86359 0.028248 0.082408 0.025753 0.827169 0.006941 0.159941 0.005948 0.006317 0.946903 0.031556 0.015224 0.019951 0.904332 0.005543 0.070174 0.151077 0.451668 0.089775 0.30748 0.017349 0.081509 0.00712 0.894022 0.966864 0.008829 0.016098 0.008209 0.068787 0.476169 0.031489 0.423554 0.74335 0.007411 0.249239 0.0 0.615282 0.161753 0.219219 0.003747 MOTIF Hindbrain_E14.5_H3K9me3_52_0_0.520_3.785373e-15 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.033256 0.010631 0.955275 0.000838 0.927678 0.021976 0.00735 0.042996 0.938524 0.0 0.049275 0.012201 0.816294 0.004965 0.174289 0.004451 0.030766 0.912676 0.028252 0.028306 0.043514 0.769359 0.024845 0.162283 0.162655 0.472334 0.096383 0.268628 0.007122 0.086277 0.015758 0.890843 0.962117 0.017814 0.018919 0.00115 0.140485 0.525023 0.051567 0.282925 0.852714 0.016247 0.131039 0.0 MOTIF Hindbrain_E15.5_H3K9me3_17_1_0.536_8.85856e-33 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.067635 0.03223 0.84945 0.050685 0.874882 0.06627 0.012502 0.046346 0.910817 0.009996 0.05179 0.027397 0.84654 0.012556 0.124943 0.01596 0.039592 0.830344 0.080254 0.049809 0.021344 0.923435 0.006618 0.048604 0.237017 0.578787 0.037588 0.146608 0.038653 0.184135 0.0043 0.772912 0.965632 0.012206 0.016984 0.005178 0.03634 0.400063 0.01714 0.546457 0.683211 0.027861 0.273264 0.015664 MOTIF Neural-Tube_E15.5_H3K9me3_40_0_0.526_1.051725e-17 letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1 0.079354 0.042607 0.878039 0.0 0.894565 0.064947 0.010821 0.029667 0.884995 0.010792 0.069858 0.034355 0.791662 0.007669 0.184042 0.016627 0.011994 0.932073 0.023775 0.032158 0.088209 0.867793 0.012584 0.031413 0.173335 0.605639 0.06651 0.154516 0.028217 0.137532 0.022262 0.811989 0.945608 0.003162 0.037604 0.013626 0.088776 0.434403 0.004913 0.471908 0.559626 0.10246 0.274351 0.063563 0.450517 0.039659 0.254209 0.255615 MOTIF Forebrain_E14.5_H3K9me3_48_13_0.516_1.134354e-10 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.974856 0.0 0.023692 0.001452 0.905122 0.029029 0.051189 0.01466 0.005061 0.956069 0.005895 0.032975 0.016653 0.935067 0.005988 0.042292 0.092256 0.528592 0.189479 0.189673 0.005838 0.020136 0.004397 0.969629 0.936068 0.005643 0.001572 0.056717 0.14684 0.105077 0.002196 0.745887 0.14485 0.300276 0.554873 0.0 MOTIF Midbrain_E11.5_H3K9me3_37_6_0.519_1.459422e-05 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.959699 0.017076 0.008865 0.01436 0.886398 0.04369 0.053673 0.016239 0.036145 0.864543 0.044863 0.054449 0.044351 0.857054 0.080968 0.017627 0.270115 0.600352 0.069971 0.059562 0.006776 0.127714 0.086504 0.779007 0.875164 0.042522 0.078157 0.004157 0.060697 0.114338 0.005795 0.819169 0.076102 0.149491 0.769666 0.004741 0.23495 0.341504 0.019496 0.40405 MOTIF Kidney_P0_H3K9me3_22_6_0.525_5.664502e-08 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.91166 0.051904 0.018273 0.018163 0.835911 0.046012 0.069526 0.048551 0.019476 0.932622 0.040412 0.00749 0.005785 0.891655 0.010607 0.091953 0.172147 0.56711 0.088806 0.171936 0.007421 0.069646 0.014426 0.908507 0.917195 0.02191 0.044139 0.016756 0.123062 0.212293 0.018977 0.645669 0.097745 0.032823 0.85334 0.016091 0.376446 0.060352 0.311138 0.252064 MOTIF Liver_E14.5_H3K9me3_30_0_0.535_8.399907e-08 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.930312 0.020813 0.046505 0.00237 0.851592 0.018603 0.088857 0.040948 0.055749 0.915885 0.019849 0.008517 0.003971 0.872788 0.030886 0.092356 0.109408 0.601332 0.106931 0.182329 0.007648 0.020585 0.012189 0.959579 0.841699 0.0986 0.044027 0.015674 0.008265 0.173903 0.008071 0.809761 0.052125 0.051183 0.875646 0.021046 0.506119 0.210068 0.154314 0.129499 MOTIF Lung_E15.5_H3K9me3_42_4_0.513_7.933679e-11 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.97275 0.025828 0.0 0.001421 0.811946 0.008208 0.140233 0.039613 0.003093 0.893208 0.001173 0.102526 0.092924 0.894837 0.003316 0.008924 0.140388 0.613204 0.092091 0.154318 0.012577 0.029143 0.003474 0.954806 0.88704 0.030348 0.062701 0.019911 0.060374 0.126334 0.013571 0.79972 0.10161 0.045238 0.809556 0.043596 0.466626 0.163031 0.112169 0.258174 MOTIF Forebrain_P0_H3K9me3_54_4_0.522_2.019103e-06 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.570779 0.023956 0.353379 0.051886 0.903651 0.012441 0.025773 0.058135 0.894887 0.001806 0.044525 0.058782 0.038277 0.801299 0.113 0.047424 0.00762 0.942431 0.016967 0.032983 0.251376 0.626476 0.078162 0.043986 0.003799 0.025913 0.053769 0.916519 0.72754 0.179664 0.059481 0.033315 0.044311 0.185403 0.003068 0.767219 0.080811 0.037308 0.877459 0.004422 0.25999 0.097812 0.333093 0.309105 MOTIF Hindbrain_E11.5_H3K9me3_2_16_0.541_4.279791e-09 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.911932 0.027975 0.030044 0.030049 0.834238 0.023335 0.114434 0.027992 0.018499 0.725981 0.207352 0.048168 0.02368 0.903066 0.035857 0.037397 0.171083 0.605405 0.081064 0.142449 0.009293 0.053466 0.009333 0.927908 0.776993 0.112713 0.056473 0.053821 0.001741 0.150749 0.019292 0.828217 0.064034 0.015662 0.915299 0.005005 0.28691 0.00786 0.436957 0.268273 MOTIF Cranio-Facial_E15.5_H3K9me3_67_6_0.512_7.773485e-10 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.623298 0.231217 0.028663 0.116822 0.940698 0.017357 0.029449 0.012496 0.799204 0.022557 0.159675 0.018564 0.003818 0.82455 0.149076 0.022556 0.038908 0.917835 0.030957 0.012299 0.097454 0.70511 0.073756 0.123679 0.009356 0.053456 0.056783 0.880405 0.791752 0.022555 0.120254 0.065439 0.066423 0.073292 0.029412 0.830873 0.089531 0.046049 0.838516 0.025903 MOTIF Limb_E15.5_H3K9me3_25_12_0.521_1.173147e-06 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.918853 0.012144 0.056159 0.012845 0.848951 0.029415 0.083046 0.038587 0.03127 0.764884 0.174051 0.029794 0.081388 0.860247 0.038891 0.019474 0.168835 0.680257 0.053016 0.097892 0.006931 0.062502 0.06837 0.862197 0.851656 0.013489 0.061657 0.073197 0.019157 0.123097 0.008362 0.849384 0.107136 0.05163 0.823106 0.018128 0.324229 0.17445 0.174078 0.327244 MOTIF Stomach_E14.5_H3K9me3_36_40_0.522_1.283217e-09 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.899841 0.043191 0.039339 0.017629 0.867253 0.006652 0.107804 0.018291 0.024332 0.68874 0.271982 0.014946 0.020214 0.939252 0.015804 0.02473 0.147214 0.726068 0.062717 0.064 0.004763 0.037862 0.016082 0.941293 0.617747 0.220103 0.106045 0.056105 0.061014 0.071859 0.013798 0.853329 0.058946 0.036054 0.882444 0.022556 MOTIF Intestine_P0_H3K9me3_58_8_0.523_3.756382e-13 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.913581 0.009404 0.074246 0.00277 0.814486 0.009257 0.124436 0.051821 0.058681 0.65108 0.251091 0.039147 0.039769 0.913432 0.034358 0.012442 0.031691 0.853481 0.030283 0.084545 0.015433 0.039734 0.008293 0.93654 0.662765 0.137398 0.127181 0.072656 0.090137 0.047406 0.036457 0.826 0.065081 0.037909 0.891635 0.005375 0.328332 0.044408 0.574465 0.052795 MOTIF Stomach_E15.5_H3K9me3_4_19_0.542_5.898101e-06 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.931445 0.018682 0.03325 0.016623 0.739794 0.01522 0.161086 0.0839 0.030162 0.742897 0.184668 0.042274 0.045141 0.901493 0.038796 0.01457 0.06896 0.78321 0.044549 0.103281 0.023439 0.033175 0.003221 0.940165 0.728424 0.058975 0.094655 0.117946 0.061191 0.086408 0.018344 0.834056 0.075118 0.056476 0.854511 0.013895 MOTIF Intestine_E16.5_H3K36me3_80_170_0.526_1.217631e-26 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.024 0.029 0.142 0.805 0.125 0.042 0.819 0.014 0.632 0.108 0.016 0.244 0.797 0.073 0.107 0.023 0.115 0.496 0.218 0.172 0.205 0.008 0.749 0.038 0.172 0.551 0.171 0.106 0.037 0.687 0.007 0.269 0.173 0.054 0.081 0.692 0.025 0.011 0.043 0.921 MOTIF Heart_P0_H3K36me3_109_160_0.508_8.62485e-12 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.172 0.015 0.787 0.026 0.982 0.016 0.001 0.001 0.939 0.001 0.059 0.001 0.51 0.001 0.488 0.001 0.094 0.676 0.229 0.001 0.118 0.634 0.126 0.122 0.084 0.476 0.195 0.246 0.001 0.001 0.001 0.997 0.556 0.001 0.001 0.442 0.026 0.511 0.001 0.462 MOTIF Forebrain_E14.5_H3K36me3_81_164_0.523_2.662479e-17 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.624 0.119 0.232 0.025 0.501 0.314 0.156 0.029 0.442 0.022 0.432 0.104 0.148 0.483 0.219 0.149 0.211 0.481 0.286 0.022 0.018 0.257 0.414 0.31 0.144 0.1 0.113 0.643 0.716 0.015 0.172 0.097 0.035 0.475 0.091 0.399 0.359 0.143 0.345 0.153 MOTIF Intestine_E14.5_H3K36me3_88_160_0.518_2.133579e-18 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.274 0.017 0.362 0.347 0.85 0.049 0.051 0.05 0.699 0.038 0.1 0.163 0.41 0.031 0.43 0.129 0.046 0.5 0.247 0.208 0.081 0.481 0.353 0.086 0.035 0.266 0.377 0.321 0.052 0.036 0.031 0.881 0.67 0.034 0.156 0.14 0.026 0.413 0.168 0.393 MOTIF Midbrain_E14.5_H3K36me3_90_160_0.518_1.250913e-14 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.323 0.044 0.486 0.148 0.646 0.081 0.089 0.184 0.567 0.036 0.165 0.232 0.46 0.088 0.427 0.025 0.14 0.561 0.19 0.109 0.242 0.501 0.233 0.024 0.13 0.222 0.368 0.28 0.042 0.043 0.042 0.873 0.747 0.027 0.024 0.202 0.134 0.462 0.023 0.381 MOTIF Lung_E15.5_H3K9me3_25_170_0.521_1.143815e-05 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.41 0.001 0.001 0.588 0.628 0.133 0.18 0.059 0.001 0.018 0.98 0.001 0.133 0.054 0.812 0.001 0.001 0.499 0.498 0.002 0.001 0.968 0.022 0.009 0.133 0.001 0.105 0.761 0.196 0.02 0.023 0.761 MOTIF Hindbrain_E11.5_H3K9me3_47_22_0.519_1.882386e-06 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.944811 0.035605 0.012777 0.006807 0.948968 0.003495 0.027502 0.020036 0.14374 0.007176 0.836489 0.012595 0.037235 0.934417 0.014831 0.013517 0.035651 0.899494 0.032627 0.032227 0.066578 0.69226 0.089952 0.15121 0.022505 0.114479 0.059775 0.803241 0.735024 0.037751 0.194836 0.032389 0.012378 0.230688 0.180222 0.576712 MOTIF Limb_E11.5_H3K9me3_36_2_0.522_8.418931e-15 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.080394 0.030313 0.888896 0.000397 0.853617 0.123221 0.00288 0.020282 0.907558 0.018622 0.042037 0.031783 0.228661 0.019495 0.721566 0.030278 0.005183 0.871461 0.114268 0.009088 0.017825 0.93579 0.015412 0.030974 0.039923 0.697428 0.066372 0.196278 0.112881 0.123472 0.018907 0.74474 0.840953 0.012581 0.04034 0.106127 0.077422 0.426278 0.194682 0.301617 MOTIF Liver_E16.5_H3K9me3_46_13_0.525_6.821171e-15 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.283864 0.016965 0.689476 0.009695 0.956272 0.010935 0.011514 0.021279 0.952842 0.014924 0.024823 0.007411 0.299238 0.012587 0.673307 0.014868 0.012583 0.960891 0.015497 0.011029 0.003385 0.964883 0.016948 0.014784 0.065572 0.628904 0.140331 0.165193 0.102737 0.183285 0.010495 0.703483 0.874137 0.024124 0.045455 0.056285 MOTIF Stomach_E15.5_H3K9me3_1_1_0.560_9.94601e-15 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.789965 0.091793 0.023732 0.094511 0.046683 0.006619 0.932378 0.01432 0.826994 0.113031 0.035852 0.024123 0.940841 0.01258 0.031544 0.015035 0.343035 0.012893 0.59198 0.052092 0.016035 0.93537 0.021507 0.027088 0.043929 0.931004 0.004519 0.020549 0.191784 0.629219 0.062409 0.116587 0.037178 0.032038 0.063801 0.866983 0.913972 0.026253 0.030111 0.029664 MOTIF Stomach_E15.5_H3K9me3_9_154_0.537_5.413792e-11 letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1 0.1 0.1 0.1 0.7 0.7 0.1 0.1 0.1 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 0.1 0.1 0.7 0.1 0.1 0.7 0.1 0.1 0.1 0.1 0.1 0.7 0.1 0.1 0.1 0.7