MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_E15.5_H3K27me3_52_125_0.503_0.0006747175
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.887255	0.027975	0.069348	0.015422
0.559568	0.269724	0.15229	0.018418
0.70301	0.026571	0.23963	0.030789
0.017218	0.922402	0.05321	0.00717
0.118659	0.110101	0.115467	0.655774
0.002386	0.08558	0.909348	0.002686
0.919942	0.020873	0.023665	0.03552
0.021024	0.008983	0.966894	0.003099
0.042531	0.120344	0.814655	0.02247

MOTIF	Heart_E15.5_H3K27me3_57_120_0.504_0.0001266115
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.698548	0.023797	0.263382	0.014272
0.5297	0.38067	0.07144	0.01819
0.85769	0.056057	0.040166	0.046086
0.010916	0.94615	0.040063	0.002872
0.11427	0.215576	0.106837	0.563317
0.002056	0.114115	0.88029	0.003538
0.883802	0.015753	0.034747	0.065698
0.026658	0.009543	0.961926	0.001874
0.0283	0.038286	0.91741	0.016004
0.497732	0.208239	0.0	0.294028

MOTIF	Heart_E16.5_H3K27me3_46_116_0.511_3.812615e-10
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.842212	0.061781	0.08795	0.008057
0.872044	0.080393	0.042803	0.00476
0.715999	0.068105	0.215895	0.0
0.004064	0.990292	0.0	0.005644
0.033481	0.12052	0.09599	0.750009
0.003852	0.060678	0.93547	0.0
0.793327	0.027647	0.174544	0.004482
0.015287	0.0	0.979393	0.005319
0.033245	0.072638	0.744525	0.149592

MOTIF	Midbrain_E12.5_H3K4me2_101_122_0.501_9.39063e-05
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.0	0.35683	0.012967	0.630203
0.0	0.85388	0.072698	0.073422
0.006628	0.007555	0.011434	0.974382
0.018483	0.906128	0.051535	0.023854
0.315366	0.615475	0.061106	0.008053
0.0	0.094313	0.893698	0.011989
0.000949	0.012589	0.03426	0.952202
0.004634	0.078425	0.077636	0.839305
0.033752	0.018674	0.0	0.947574
0.078458	0.865156	0.011901	0.044484
0.0	0.46576	0.0	0.53424

MOTIF	Lung_E16.5_H3K4me2_80_125_0.531_3.750118e-43
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
1.0	0.0	0.0	0.0
0.935114	0.042083	0.015741	0.007063
0.890556	0.09999	0.0	0.009454
0.015136	0.984864	0.0	0.0
0.026586	0.258388	0.462544	0.252482
0.024006	0.097527	0.878467	0.0
1.0	0.0	0.0	0.0
0.092066	0.0	0.889229	0.018704
0.094598	0.099473	0.755881	0.050049

MOTIF	Hindbrain_E15.5_H3K4me2_96_106_0.505_1.525247e-06
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.41283	0.0	0.58717
0.0	0.91454	0.035883	0.049576
0.037227	0.111793	0.014322	0.836658
0.0	0.947349	0.052651	0.0
0.41524	0.038463	0.542337	0.00396
0.0	0.159158	0.821977	0.018864
0.009334	0.109689	0.019887	0.86109
0.010753	0.029141	0.10353	0.856576
0.007075	0.044303	0.009412	0.93921
0.023553	0.960725	0.004243	0.011478

MOTIF	Hindbrain_P0_H3K4me2_97_141_0.521_1.356178e-46
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.0	0.839717	0.160283	0.0
0.060489	0.044705	0.0	0.894806
0.0	0.965866	0.034134	0.0
0.417565	0.006871	0.553917	0.021647
0.0	0.064977	0.888102	0.046922
0.0	0.037105	0.0	0.962895
0.016944	0.014889	0.065533	0.902634
0.019742	0.032856	0.0	0.947403

MOTIF	Hindbrain_E16.5_H3K4me2_97_132_0.508_9.983669e-13
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.900937	0.055718	0.043345
0.054851	0.083927	0.0	0.861222
0.011994	0.94029	0.035589	0.012127
0.501162	0.228996	0.269842	0.0
0.0	0.096725	0.890065	0.01321
0.029712	0.148374	0.033471	0.788443
0.011731	0.080795	0.107754	0.79972
0.007214	0.018688	0.0	0.974098
0.021034	0.940425	0.012773	0.025767

MOTIF	Intestine_E14.5_H3K4me2_97_128_0.506_5.577511e-09
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.8601	0.086422	0.053478
0.032648	0.055737	0.012763	0.898852
0.008313	0.945085	0.046602	0.0
0.370082	0.195632	0.394588	0.039697
0.0	0.115135	0.849866	0.034998
0.037981	0.087482	0.030238	0.844299
0.010362	0.06362	0.095547	0.830472
0.000374	0.037623	0.003056	0.958947
0.017186	0.968155	0.0	0.014659
0.0	0.26138	0.0	0.73862

MOTIF	Kidney_E16.5_H3K4me2_92_118_0.520_1.427773e-33
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.073543	0.126811	0.316842	0.482804
0.003469	0.884911	0.051713	0.059906
0.043104	0.177593	0.02101	0.758293
0.008707	0.942976	0.048317	0.0
0.444477	0.283079	0.243782	0.028661
0.0	0.060131	0.908471	0.031398
0.04505	0.189699	0.029386	0.735865
0.002702	0.101798	0.070078	0.825422
0.011698	0.01089	0.0	0.977413
0.098806	0.848722	0.0	0.052472

MOTIF	Stomach_E16.5_H3K4me2_92_117_0.512_1.745756e-18
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.084723	0.291997	0.304736	0.318545
0.0	0.932232	0.055693	0.012075
0.03874	0.124984	0.053586	0.782691
0.008514	0.924385	0.057441	0.009661
0.537853	0.24741	0.194765	0.019972
0.0	0.0515	0.934226	0.014274
0.022931	0.224984	0.041559	0.710527
0.010509	0.046725	0.140221	0.802545
0.014745	0.049499	0.005227	0.93053
0.023961	0.944901	0.006049	0.025089

MOTIF	Limb_E13.5_H3K4me3_104_133_0.514_9.166967e-16
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.630017	0.033772	0.33621
0.0	0.855631	0.077608	0.066761
0.047308	0.0	0.028149	0.924543
0.0	0.958901	0.041099	0.0
0.480742	0.063765	0.455492	0.0
0.0	0.045361	0.913829	0.040809
0.030924	0.11656	0.009162	0.843354
0.0	0.035664	0.0	0.964336
0.0	0.032598	0.0	0.967402

MOTIF	Forebrain_E12.5_H3K4me3_79_128_0.515_1.333438e-11
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.430643	0.448548	0.035019	0.08579
0.0	0.925191	0.046506	0.028303
0.041308	0.135453	0.0	0.823239
0.011735	0.92565	0.058271	0.004345
0.439143	0.093599	0.467259	0.0
0.0	0.067128	0.892421	0.040451
0.0	0.0	0.057259	0.942741
0.001372	0.060122	0.043636	0.89487
0.000548	0.027045	0.0	0.972407

MOTIF	Heart_E14.5_H3K4me3_87_136_0.517_1.999185e-18
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.005012	0.857741	0.073066	0.064181
0.029858	0.175522	0.022106	0.772515
0.00317	0.958973	0.037857	0.0
0.417182	0.057574	0.495411	0.029833
0.0	0.014267	0.953723	0.032009
0.030956	0.09127	0.047892	0.829882
0.003575	0.058268	0.062223	0.875934
0.0	0.021164	0.0	0.978836
0.028408	0.971592	0.0	0.0

MOTIF	Limb_E15.5_H3K4me3_77_133_0.512_2.257835e-10
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.003846	0.85196	0.050306	0.093888
0.02203	0.169607	0.0	0.808363
0.015371	0.908356	0.076273	0.0
0.442538	0.130488	0.422356	0.004618
0.0	0.073776	0.872804	0.053421
0.017136	0.026474	0.09582	0.86057
0.008775	0.041512	0.049146	0.900567
0.014876	0.068879	0.0	0.916245
0.022597	0.944348	0.0	0.033055
0.0	0.354855	0.0	0.645145

MOTIF	Cranio-Facial_E15.5_H3K4me3_83_138_0.518_1.019041e-21
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.853787	0.088294	0.057919
0.036187	0.131989	0.046056	0.785768
0.009676	0.985259	0.005065	0.0
0.573365	0.036577	0.38348	0.006577
0.0	0.154324	0.801266	0.044411
0.034063	0.056206	0.050746	0.858985
0.011726	0.014645	0.034839	0.93879
0.018816	0.026004	0.0	0.95518
0.021583	0.961903	0.0	0.016515

MOTIF	Lung_E14.5_H3K4me3_95_135_0.510_1.623157e-11
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.92679	0.051271	0.021939
0.034269	0.181693	0.021049	0.762988
0.01081	0.935632	0.053558	0.0
0.52045	0.0	0.47955	0.0
0.0	0.103993	0.876867	0.019141
0.0	0.10871	0.032794	0.858496
0.013753	0.037197	0.09978	0.84927
0.01255	0.043361	0.0	0.944089
0.031413	0.95086	0.0	0.017727

MOTIF	Intestine_E14.5_H3K27ac_101_83_0.503_0.0001573101
letter-probability matrix: alength= 4 w= 13 nsites= 100 E= 1.0e-1
0.0	0.40964	0.339643	0.250717
0.027847	0.015063	0.594073	0.363016
0.243176	0.147113	0.035086	0.574625
0.006087	0.937679	0.041059	0.015175
0.032084	0.109578	0.015234	0.843104
0.004111	0.932581	0.063308	0.0
0.408049	0.231124	0.288178	0.072648
0.012997	0.031321	0.945293	0.010389
0.07105	0.044295	0.043725	0.840929
0.017655	0.084956	0.311353	0.586036
0.030768	0.010428	0.01626	0.942544
0.056481	0.900395	0.007369	0.035755
0.082211	0.491394	0.010356	0.41604

MOTIF	Limb_E12.5_H3K27ac_95_66_0.505_1.572662e-15
letter-probability matrix: alength= 4 w= 14 nsites= 100 E= 1.0e-1
0.210494	0.0	0.708526	0.08098
0.526656	0.090165	0.130385	0.252794
0.028564	0.053168	0.631305	0.286963
0.518428	0.008893	0.129157	0.343523
0.02196	0.962359	0.009376	0.006305
0.067312	0.038746	0.038886	0.855055
0.005903	0.935403	0.041621	0.017073
0.384341	0.263144	0.27761	0.074906
0.014047	0.040825	0.91073	0.034398
0.066508	0.054665	0.08492	0.793906
0.023961	0.039073	0.128371	0.808595
0.025757	0.121053	0.015722	0.837469
0.018875	0.89662	0.025319	0.059186
0.124929	0.618294	0.0	0.256776

MOTIF	Hindbrain_E13.5_H3K27me3_47_98_0.510_6.371675e-07
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.991139	0.0	0.008861
0.029579	0.340086	0.01275	0.617585
0.0	0.996174	0.003826	0.0
0.863077	0.053396	0.035525	0.048002
0.0	0.034218	0.965782	0.0
0.031719	0.126174	0.234539	0.607568
0.048677	0.092996	0.236357	0.62197
0.044404	0.08862	0.033732	0.833245
0.011407	0.975495	0.0	0.013099
0.0	0.936455	0.0	0.063545

MOTIF	Forebrain_E13.5_H3K4me1_65_143_0.510_3.411556e-21
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.258038	0.402504	0.339458
0.0	0.79106	0.20894	0.0
0.046215	0.006889	0.030781	0.916115
0.010861	0.948679	0.002889	0.037571
0.770516	0.097115	0.052228	0.08014
0.0	0.284554	0.37226	0.343186
0.008394	0.030098	0.014091	0.947417
0.046902	0.066764	0.053071	0.833263
0.020927	0.107732	0.060879	0.810462

MOTIF	Cranio-Facial_E11.5_H3K4me1_89_85_0.506_3.868315e-06
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.003251	0.953645	0.035953	0.007151
0.034684	0.072547	0.027753	0.865016
0.004179	0.936977	0.057243	0.001601
0.506195	0.202411	0.129333	0.162061
0.001451	0.082796	0.886483	0.02927
0.035692	0.037326	0.120787	0.806195
0.01622	0.134437	0.200933	0.648411
0.01385	0.098931	0.015311	0.871908
0.023936	0.93023	0.021693	0.024141
0.109068	0.400017	0.063823	0.427091

MOTIF	Kidney_P0_H3K4me1_106_87_0.502_3.855046e-05
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.013022	0.880791	0.074658	0.031529
0.042304	0.051816	0.07751	0.828371
0.007358	0.923074	0.062253	0.007314
0.595164	0.239598	0.130355	0.034883
0.01377	0.076582	0.888972	0.020676
0.039195	0.038019	0.045179	0.877606
0.054067	0.062527	0.195912	0.687494
0.036927	0.063856	0.022577	0.876641
0.026725	0.914269	0.008606	0.050401
0.08608	0.368379	0.021581	0.523959

MOTIF	Forebrain_E11.5_H3K4me1_87_103_0.508_3.855394e-17
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.001981	0.924188	0.069809	0.004022
0.04028	0.152175	0.029015	0.778529
0.0	0.935044	0.035766	0.02919
0.47422	0.070067	0.290811	0.164901
0.003435	0.03553	0.92239	0.038645
0.020801	0.076614	0.025807	0.876778
0.018627	0.002716	0.100893	0.877763
0.027219	0.128518	0.005221	0.839042
0.028998	0.957723	0.004629	0.008651
0.0	0.506258	0.0	0.493742

MOTIF	Midbrain_E12.5_H3K4me1_95_122_0.500_2.346904e-08
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.00916	0.729405	0.244154	0.017281
0.080597	0.018722	0.063705	0.836975
0.0	0.987181	0.012819	0.0
0.520894	0.035363	0.414322	0.029421
0.012147	0.031185	0.904082	0.052587
0.009401	0.01618	0.029483	0.944935
0.024737	0.044192	0.090581	0.840491
0.161862	0.027445	0.013822	0.796871
0.108195	0.866465	0.005082	0.020259
0.01254	0.544445	0.007647	0.435368

MOTIF	Kidney_E16.5_H3K27me3_45_88_0.507_8.888671e-05
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.006601	0.933045	0.038067	0.022287
0.024937	0.063069	0.071269	0.840726
0.002911	0.956121	0.040968	0.0
0.660266	0.152671	0.156988	0.030075
0.005382	0.05099	0.937726	0.005902
0.052283	0.058588	0.092321	0.796807
0.005878	0.043628	0.373327	0.577168
0.018508	0.048716	0.040195	0.892581
0.00433	0.95841	0.019835	0.017424
0.222642	0.432263	0.0	0.345095

MOTIF	Cranio-Facial_E12.5_H3K27me3_50_89_0.506_0.0003849923
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.956407	0.023075	0.020518
0.019178	0.073578	0.026564	0.880679
0.0	0.945582	0.054418	0.0
0.621176	0.156291	0.189844	0.032689
0.003348	0.017214	0.973906	0.005532
0.036495	0.055652	0.023925	0.883929
0.004149	0.063407	0.399098	0.533345
0.021867	0.057499	0.060717	0.859917
0.013133	0.958395	0.018817	0.009656
0.0	0.562139	0.0	0.437861

MOTIF	Neural-Tube_E15.5_H3K27me3_53_105_0.510_0.0001505665
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.001467	0.941405	0.040879	0.016248
0.045939	0.052848	0.032082	0.869131
0.0	0.949663	0.050337	0.0
0.715334	0.059091	0.20718	0.018394
0.000596	0.057445	0.931139	0.01082
0.038614	0.048744	0.07747	0.835172
0.03459	0.056831	0.275018	0.63356
0.017534	0.074006	0.024062	0.884398
0.017934	0.937542	0.0	0.044524
0.0	0.698858	0.004387	0.296755

MOTIF	Neural-Tube_E14.5_H3K9ac_88_121_0.511_4.647901e-06
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.30069	0.590705	0.029924	0.078681
0.0	0.882797	0.092816	0.024386
0.028907	0.040427	0.05636	0.874307
0.0	0.976681	0.023319	0.0
0.488371	0.103025	0.406128	0.002475
0.0	0.127125	0.832994	0.039881
0.0	0.073651	0.035956	0.890392
0.01599	0.063883	0.082804	0.837323
0.002958	0.0	0.006875	0.990167
0.00384	0.965283	0.010703	0.020174

MOTIF	Limb_E13.5_H3K9ac_88_140_0.512_3.729455e-16
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.977238	0.0	0.022762	0.0
0.613682	0.137479	0.241514	0.007325
0.772644	0.114205	0.106201	0.006949
0.012827	0.974841	0.012333	0.0
0.081787	0.269655	0.289039	0.359519
0.001059	0.035402	0.960646	0.002894
0.891469	0.02558	0.060145	0.022805
0.042437	0.012459	0.945104	0.0
0.051622	0.022683	0.916797	0.008898

MOTIF	Stomach_P0_H3K9ac_93_126_0.507_1.87512e-18
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.925607	0.0	0.074393	0.0
0.64724	0.288331	0.052707	0.011722
0.836458	0.040086	0.105927	0.017528
0.0	0.922765	0.077235	0.0
0.057241	0.237064	0.209626	0.496069
0.0	0.058377	0.93988	0.001743
0.945064	0.025149	0.0	0.029786
0.049827	0.011883	0.929385	0.008905
0.036422	0.088877	0.85474	0.01996

MOTIF	Limb_E15.5_H3K9ac_75_115_0.515_2.203895e-08
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.0	0.319185	0.030963	0.649852
0.010491	0.93544	0.003843	0.050225
0.015422	0.130627	0.075082	0.778868
0.013499	0.953959	0.032543	0.0
0.481792	0.058905	0.459303	0.0
0.0	0.04363	0.932806	0.023564
0.053306	0.051563	0.014554	0.880577
0.007326	0.068726	0.144141	0.779806
0.026816	0.046208	0.0	0.926975
0.012133	0.949779	0.019033	0.019055
0.033281	0.390323	0.0	0.576396

MOTIF	Heart_E13.5_H3K9ac_93_109_0.510_5.241088e-17
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.105546	0.32166	0.215389	0.357405
0.003618	0.878838	0.082066	0.035478
0.03904	0.029859	0.053546	0.877555
0.002809	0.950878	0.040331	0.005983
0.475801	0.225439	0.241288	0.057472
0.001673	0.139762	0.831964	0.026602
0.03581	0.123123	0.036871	0.804196
0.019036	0.026104	0.112236	0.842623
0.016813	0.069349	0.008024	0.905814
0.015167	0.963348	0.0	0.021486
0.0	0.54554	0.0	0.45446

MOTIF	Heart_E15.5_H3K9ac_87_124_0.510_2.901408e-12
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.954866	0.009092	0.036042
0.015041	0.126775	0.024837	0.833347
0.005057	0.96686	0.028084	0.0
0.536534	0.086896	0.366959	0.009611
0.0	0.045622	0.932822	0.021556
0.051648	0.089856	0.038997	0.8195
0.012324	0.016131	0.271492	0.700053
0.029685	0.086859	0.00769	0.875766
0.023771	0.958265	0.011266	0.006698

MOTIF	Lung_E14.5_H3K9ac_77_106_0.511_3.572235e-12
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.257953	0.227357	0.122249	0.392441
0.004366	0.956651	0.004447	0.034536
0.018137	0.163636	0.031279	0.786949
0.000503	0.938217	0.06128	0.0
0.515499	0.029532	0.434415	0.020554
0.0	0.014138	0.972877	0.012986
0.049741	0.07973	0.042948	0.827581
0.024652	0.014424	0.115658	0.845266
0.01484	0.168247	0.008032	0.80888
0.03723	0.935143	0.0	0.027627

MOTIF	Neural-Tube_E13.5_H3K9ac_97_121_0.504_2.345444e-12
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.925118	0.051717	0.023165
0.037088	0.13236	0.020042	0.810511
0.0	0.939068	0.060932	0.0
0.564831	0.04047	0.376206	0.018493
0.009115	0.069426	0.867831	0.053628
0.06602	0.061507	0.029184	0.843289
0.015409	0.02959	0.167006	0.787994
0.017955	0.225779	0.0	0.756266
0.015971	0.969794	0.0	0.014235
0.0	0.408824	0.123118	0.468058

MOTIF	Stomach_P0_H3K9ac_95_104_0.502_3.381243e-07
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.0	0.954253	0.023682	0.022065
0.0	0.066349	0.208292	0.725359
0.006905	0.983148	0.008782	0.001166
0.764807	0.068656	0.103653	0.062884
0.0	0.062614	0.937386	0.0
0.045777	0.059985	0.03957	0.854668
0.002172	0.062119	0.439314	0.496395
0.033653	0.035345	0.019506	0.911495
0.0	0.939803	0.014041	0.046156
0.003122	0.646673	0.0	0.350205
0.02117	0.438542	0.0	0.540288
0.005855	0.396526	0.597618	0.0