MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Hindbrain_E14.5_H3K4me2_63_74_0.554_1.607171e-145 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.894898 0.075966 0.017495 0.011641 0.065145 0.029895 0.904959 0.0 0.713735 0.132081 0.100115 0.054069 0.06742 0.09656 0.609826 0.226195 0.0 0.053488 0.928871 0.017641 0.02129 0.051059 0.873951 0.0537 0.139176 0.026511 0.834313 0.0 0.327443 0.556859 0.023128 0.09257 0.014054 0.011017 0.97493 0.0 MOTIF Midbrain_E14.5_H3K4me2_44_50_0.605_1.0573e-321 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.019598 0.980402 0.0 0.845296 0.0 0.068637 0.086067 0.050444 0.349484 0.451526 0.148546 0.065035 0.054907 0.880059 0.0 0.088328 0.0 0.544065 0.367607 0.063482 0.015987 0.908569 0.011962 0.052545 0.870131 0.053999 0.023326 0.0 0.0 0.982896 0.017104 0.0 1.0 0.0 0.0 MOTIF Forebrain_P0_H3K27ac_25_18_0.548_1.129749e-161 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.0 0.571721 0.428279 0.0 0.0 0.941698 0.0 0.058302 0.0 0.074324 0.881314 0.044362 0.873781 0.010669 0.032469 0.083082 0.010977 0.22508 0.739585 0.024358 0.238531 0.018507 0.688783 0.054178 0.023074 0.117933 0.720714 0.138278 0.029803 0.049128 0.909238 0.011831 0.022943 0.917438 0.041876 0.017743 0.026356 0.0 0.973644 0.0 MOTIF Heart_E11.5_H3K27ac_35_20_0.530_4.123894e-70 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.375568 0.624432 0.0 0.013671 0.974432 0.0 0.011896 0.0 0.0 1.0 0.0 0.869711 0.021502 0.045963 0.062823 0.0 0.081287 0.762023 0.15669 0.063017 0.086424 0.685984 0.164575 0.014249 0.077812 0.722817 0.185122 0.019261 0.013816 0.919976 0.046947 0.02103 0.953472 0.0 0.025498 MOTIF Hindbrain_E11.5_H3K27ac_34_36_0.539_6.312157e-55 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.057559 0.91584 0.0 0.026602 0.0 0.016649 0.983351 0.0 0.694679 0.025276 0.0 0.280045 0.032082 0.008214 0.834199 0.125505 0.048515 0.068795 0.603667 0.279023 0.01943 0.038937 0.799932 0.141701 0.030199 0.050743 0.88824 0.030817 0.225529 0.624508 0.080344 0.069619 0.0 0.0 0.982233 0.017767 MOTIF Hindbrain_E11.5_H3K27ac_41_59_0.535_8.835685e-38 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.0 1.0 0.0 0.742997 0.0 0.0 0.257003 0.0 0.037216 0.953116 0.009669 0.457166 0.042053 0.475793 0.024987 0.045917 0.073258 0.867449 0.013376 0.03085 0.101211 0.86794 0.0 0.09501 0.86341 0.0 0.041581 0.0 0.0 1.0 0.0 0.15539 0.827181 0.0 0.017429 MOTIF Intestine_E15.5_H3K4me2_27_15_0.600_6.501904e-321 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.007675 0.867825 0.075764 0.048735 0.025101 0.843157 0.093486 0.038256 0.021582 0.061147 0.700024 0.217247 0.029981 0.6817 0.167089 0.12123 0.080648 0.695763 0.080005 0.143584 0.067755 0.793058 0.081922 0.057265 0.065167 0.833154 0.079866 0.021813 0.041776 0.070737 0.086981 0.800506 4.1e-05 0.920445 0.044654 0.03486 0.093724 0.036226 0.617655 0.252395 0.0 0.234478 0.761678 0.003844 MOTIF Liver_E12.5_H3K4me2_15_19_0.607_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.099306 0.741113 0.159581 0.0 0.023343 0.937632 0.021331 0.017694 0.019216 0.018272 0.934626 0.027886 0.100926 0.840895 0.030348 0.027831 0.016354 0.572704 0.066636 0.344305 0.004603 0.909395 0.060886 0.025116 0.135087 0.82932 0.00969 0.025903 0.024806 0.061417 0.158144 0.755633 0.0 0.976523 0.01671 0.006767 MOTIF Neural-Tube_E11.5_H3K4me2_27_10_0.639_0 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.011494 0.873789 0.078513 0.036204 0.078498 0.794195 0.10526 0.022047 0.013562 0.059805 0.767564 0.159069 0.030684 0.817956 0.056633 0.094727 0.023584 0.737606 0.098643 0.140168 0.067044 0.648643 0.103848 0.180465 0.037919 0.926265 0.02069 0.015125 0.037426 0.070399 0.071521 0.820654 0.002084 0.790849 0.171252 0.035816 0.024019 0.428345 0.34762 0.200017 0.000626 0.419344 0.463605 0.116424 MOTIF Heart_E12.5_H3K4me2_29_12_0.586_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.037554 0.841171 0.114658 0.006617 0.038898 0.812599 0.114836 0.033667 0.023528 0.021313 0.89448 0.060679 0.029087 0.846765 0.111443 0.012705 0.140075 0.538511 0.068141 0.253273 0.089885 0.715446 0.133169 0.061501 0.035874 0.918998 0.021395 0.023733 0.02875 0.024613 0.081968 0.86467 0.003784 0.88011 0.047231 0.068876 0.300531 0.419447 0.212076 0.067946 MOTIF Heart_E13.5_H3K4me2_16_8_0.597_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.012706 0.871066 0.107019 0.009209 0.038328 0.830294 0.100094 0.031284 0.021881 0.011655 0.906031 0.060433 0.027347 0.85869 0.096763 0.0172 0.121145 0.708631 0.090651 0.079573 0.082202 0.501276 0.358718 0.057804 0.037858 0.918883 0.029182 0.014077 0.016506 0.01892 0.114652 0.849922 0.006506 0.816101 0.039591 0.137802 0.104676 0.439112 0.185887 0.270325 MOTIF Neural-Tube_E12.5_H3K4me2_58_10_0.566_1.668527e-154 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.425399 0.02178 0.274931 0.277889 0.094657 0.008671 0.738134 0.158537 0.021427 0.900048 0.067104 0.011421 0.092189 0.755502 0.034123 0.118186 0.02275 0.062584 0.663383 0.251283 0.026621 0.76375 0.111235 0.098394 0.060089 0.73566 0.07344 0.130811 0.048869 0.803463 0.080517 0.067151 0.03027 0.829347 0.11079 0.029594 0.033601 0.015558 0.15811 0.792731 0.000861 0.952477 0.034721 0.011941 MOTIF Cranio-Facial_E13.5_H3K4me2_58_16_0.565_4.726889e-197 letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1 0.12754 0.040747 0.212135 0.619578 0.0 0.022039 0.770742 0.207219 0.027497 0.870945 0.086099 0.01546 0.033023 0.771599 0.154494 0.040884 0.020039 0.024864 0.662438 0.292658 0.028799 0.76844 0.16428 0.03848 0.016248 0.720375 0.063266 0.200111 0.062078 0.799486 0.072785 0.065652 0.040816 0.899402 0.035002 0.02478 0.034351 0.02816 0.134238 0.80325 0.005141 0.930573 0.042194 0.022091 MOTIF Hindbrain_E15.5_H3K4me2_46_15_0.590_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.043581 0.871489 0.039642 0.045288 0.07843 0.788815 0.098895 0.033861 0.024531 0.024489 0.676873 0.274107 0.00875 0.921899 0.024618 0.044733 0.020547 0.710323 0.080951 0.188179 0.064058 0.798778 0.072487 0.064677 0.048782 0.780028 0.106246 0.064944 0.041472 0.035157 0.076989 0.846382 0.002802 0.903334 0.090139 0.003725 0.177479 0.446995 0.199796 0.17573 MOTIF Lung_E14.5_H3K4me2_41_21_0.579_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.045581 0.794731 0.098006 0.061682 0.079253 0.755489 0.129897 0.035361 0.014375 0.04316 0.674402 0.268063 0.007124 0.926712 0.022559 0.043605 0.02208 0.731445 0.062565 0.183909 0.074971 0.762195 0.089319 0.073515 0.028331 0.865514 0.019961 0.086193 0.038492 0.028306 0.063571 0.86963 0.0 0.873089 0.046035 0.080876 MOTIF Limb_E13.5_H3K4me2_35_17_0.592_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.033265 0.869715 0.089894 0.007125 0.02736 0.70016 0.150762 0.121718 0.023253 0.056785 0.83278 0.087182 0.050065 0.792483 0.032591 0.124861 0.074065 0.68948 0.075962 0.160493 0.057153 0.80059 0.087033 0.055223 0.035761 0.79164 0.076219 0.096381 0.022751 0.023688 0.131917 0.821644 0.003989 0.951105 0.039019 0.005888 MOTIF Forebrain_E11.5_H3K4me2_41_20_0.622_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.010401 0.857428 0.098286 0.033886 0.095016 0.830043 0.053266 0.021674 0.084185 0.031947 0.756347 0.127521 0.00925 0.843703 0.117335 0.029712 0.067887 0.712762 0.088553 0.130798 0.048451 0.65704 0.141567 0.152943 0.033263 0.916071 0.024092 0.026574 0.043348 0.051162 0.081287 0.824203 0.009118 0.799752 0.146487 0.044643 MOTIF Hindbrain_E11.5_H3K4me2_29_13_0.647_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.027387 0.860529 0.074701 0.037383 0.083214 0.832152 0.059641 0.024993 0.044076 0.0269 0.814438 0.114586 0.009676 0.846048 0.113197 0.031079 0.036649 0.761883 0.085939 0.115529 0.044108 0.609421 0.204246 0.142226 0.029189 0.8211 0.081818 0.067893 0.030184 0.063343 0.16287 0.743604 0.006813 0.918792 0.055273 0.019121 MOTIF Forebrain_E12.5_H3K4me2_35_18_0.610_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.035587 0.814247 0.10844 0.041726 0.025186 0.84703 0.099939 0.027845 0.016778 0.07501 0.67431 0.233902 0.029557 0.719969 0.124826 0.125648 0.020994 0.738023 0.076325 0.164658 0.050537 0.841879 0.048 0.059584 0.034136 0.849673 0.091799 0.024392 0.052813 0.048807 0.132786 0.765594 0.0 0.936161 0.049297 0.014542 MOTIF Heart_E16.5_H3K4me2_57_19_0.548_4.537282e-247 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.008677 0.876791 0.068822 0.045711 0.089946 0.764859 0.107429 0.037767 0.031027 0.050237 0.675467 0.243269 0.023318 0.743777 0.12517 0.107735 0.074279 0.710478 0.072492 0.142751 0.040994 0.82072 0.063087 0.075199 0.025068 0.921651 0.023974 0.029306 0.04064 0.018302 0.080261 0.860797 0.00281 0.885261 0.055451 0.056479 MOTIF Lung_E15.5_H3K4me2_36_14_0.595_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.028136 0.867252 0.090175 0.014436 0.077986 0.773189 0.112151 0.036674 0.028151 0.041234 0.728926 0.201688 0.034843 0.767263 0.099839 0.098056 0.052814 0.732809 0.063357 0.151019 0.048349 0.715079 0.086619 0.149953 0.030635 0.912952 0.025089 0.031324 0.030308 0.037774 0.137331 0.794587 0.0 0.939938 0.041452 0.01861 MOTIF Midbrain_E13.5_H3K4me2_33_10_0.602_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.072579 0.0 0.825162 0.102259 0.023664 0.884286 0.082034 0.010016 0.084503 0.735405 0.152399 0.027693 0.025761 0.04724 0.68854 0.23846 0.032879 0.691153 0.163183 0.112785 0.020393 0.854783 0.065906 0.058918 0.057974 0.804241 0.078611 0.059174 0.041657 0.785982 0.143561 0.028799 0.022136 0.013261 0.178477 0.786126 0.0 0.946488 0.040858 0.012654 MOTIF Stomach_E14.5_H3K4me2_41_11_0.610_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.038922 0.0 0.680156 0.280922 0.024861 0.839817 0.11064 0.024682 0.069385 0.832011 0.06543 0.033174 0.043919 0.053512 0.729102 0.173467 0.030906 0.750584 0.133849 0.084662 0.022565 0.769131 0.084736 0.123568 0.046309 0.746991 0.074229 0.132471 0.029595 0.818506 0.12762 0.024278 0.053776 0.037113 0.124384 0.784727 0.002746 0.901001 0.091141 0.005111 MOTIF Forebrain_E13.5_H3K4me2_32_37_0.601_3.00417e-311 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.092442 0.597207 0.0 0.310352 0.013391 0.019692 0.966917 0.0 0.854174 0.021469 0.05521 0.069147 0.017408 0.031587 0.94207 0.008936 0.041626 0.107102 0.84665 0.004621 0.333466 0.053432 0.485847 0.127254 0.209657 0.007301 0.633707 0.149335 0.07449 0.822698 0.084777 0.018035 0.008141 0.006632 0.979851 0.005376 MOTIF Heart_P0_H3K4me2_24_24_0.617_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.012906 0.817458 0.05388 0.115756 0.018686 0.013462 0.947186 0.020666 0.80859 0.050862 0.055607 0.08494 0.0 0.028398 0.869215 0.102387 0.026673 0.063999 0.821837 0.08749 0.038382 0.052347 0.711568 0.197704 0.036641 0.013033 0.767226 0.1831 0.045223 0.934898 0.019879 0.0 0.010076 0.014383 0.97554 0.0 MOTIF Hindbrain_E13.5_H3K4me2_18_21_0.637_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.032401 0.781045 0.084692 0.101862 0.0 0.01858 0.967175 0.014245 0.717289 0.046046 0.075197 0.161468 0.107385 0.089048 0.735461 0.068106 0.03279 0.061456 0.759284 0.146469 0.027164 0.038907 0.83933 0.094599 0.1255 0.014198 0.796344 0.063958 0.113308 0.787359 0.018275 0.081057 0.004388 0.008248 0.974555 0.012809 MOTIF Kidney_E15.5_H3K4me2_17_27_0.623_0 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.162701 0.68518 0.049118 0.103001 0.021017 0.013682 0.939771 0.02553 0.877949 0.0 0.057104 0.064948 0.037352 0.031122 0.868918 0.062608 0.0 0.0 0.970798 0.029202 0.065401 0.080078 0.719712 0.134809 0.036894 0.021285 0.730691 0.21113 0.051793 0.926282 0.0 0.021925 0.0 0.015585 0.984415 0.0 0.067971 0.509705 0.26823 0.154095 MOTIF Hindbrain_E12.5_H3K4me2_29_18_0.614_6.022251e-312 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.035619 0.860259 0.07472 0.029402 0.003223 0.009309 0.985923 0.001546 0.896743 0.010972 0.022367 0.069918 0.013672 0.016939 0.937044 0.032345 0.150664 0.045181 0.678537 0.125617 0.185779 0.075828 0.610345 0.128048 0.027241 0.064278 0.898148 0.010334 0.284099 0.574709 0.045579 0.095613 0.025704 0.016902 0.945753 0.011641 0.46107 0.189111 0.24823 0.10159 MOTIF Forebrain_P0_H3K4me2_17_26_0.647_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.035683 0.770566 0.097437 0.096314 0.0 0.02033 0.96102 0.018651 0.753347 0.06492 0.024443 0.15729 0.0 0.021322 0.937303 0.041374 0.069283 0.047657 0.746724 0.136336 0.314237 0.041034 0.579909 0.06482 0.016608 0.03935 0.823468 0.120574 0.034644 0.908819 0.011911 0.044627 0.018556 0.026371 0.918469 0.036603 MOTIF Cranio-Facial_E15.5_H3K4me2_23_28_0.627_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.090667 0.682654 0.141948 0.084731 0.0 0.063713 0.936287 0.0 0.94498 0.008897 0.0 0.046123 0.028465 0.060592 0.910943 0.0 0.242397 0.050811 0.647619 0.059173 0.136468 0.020191 0.724386 0.118955 0.147232 0.018322 0.786171 0.048275 0.085821 0.841219 0.057827 0.015133 0.019188 0.008975 0.971837 0.0 MOTIF Intestine_E16.5_H3K4me2_23_27_0.623_4.829014e-317 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.070236 0.748805 0.150258 0.030702 0.024565 0.025119 0.950316 0.0 0.876421 0.022505 0.055776 0.045298 0.053621 0.02561 0.829085 0.091684 0.042102 0.072904 0.790115 0.094879 0.219176 0.072347 0.516972 0.191505 0.234566 0.037096 0.716875 0.011464 0.103627 0.833984 0.03511 0.027279 0.010152 0.017544 0.961604 0.0107 0.273815 0.55764 0.061183 0.107362 MOTIF Liver_E15.5_H3K4me2_25_18_0.601_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.056794 0.801665 0.060003 0.081538 0.007152 0.014317 0.97853 0.0 0.884819 0.061573 0.0 0.053608 0.057817 0.037915 0.803795 0.100473 0.024453 0.289369 0.62383 0.062349 0.139037 0.073638 0.722295 0.065031 0.05271 0.028356 0.902766 0.016168 0.254836 0.719442 0.014919 0.010803 0.015538 0.017194 0.951795 0.015474 MOTIF Midbrain_E12.5_H3K4me2_45_51_0.591_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.056741 0.886453 0.056806 0.148759 0.65741 0.009456 0.184374 0.154078 0.788125 0.047128 0.010669 0.13351 0.741986 0.050468 0.074036 0.162131 0.821262 0.016607 0.0 0.081887 0.148078 0.0 0.770035 0.009573 0.950627 0.0398 0.0 0.065446 0.0 0.858055 0.076499 0.0 0.890419 0.102659 0.006922 MOTIF Midbrain_E15.5_H3K4me2_23_27_0.633_3.201104e-313 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.033055 0.819642 0.026948 0.120355 0.0 0.04015 0.938726 0.021124 0.949273 0.0 0.0 0.050727 0.032629 0.123087 0.778252 0.066032 0.100537 0.025959 0.846852 0.026653 0.067294 0.01565 0.894787 0.022269 0.180907 0.355563 0.439269 0.024261 0.022099 0.878935 0.059888 0.039077 0.006132 0.020245 0.973623 0.0 0.053025 0.292034 0.370251 0.28469 MOTIF Forebrain_P0_H3K4me2_33_49_0.612_1.739408e-319 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.09473 0.90527 0.0 0.851896 0.03405 0.038903 0.075151 0.0 0.073739 0.919527 0.006734 0.46093 0.046577 0.484871 0.007622 0.028576 0.057044 0.764521 0.149859 0.027877 0.083611 0.809074 0.079437 0.0 0.921362 0.070751 0.007887 0.010392 0.0 0.989608 0.0 0.206387 0.779412 0.0 0.014201 MOTIF Kidney_E16.5_H3K4me2_35_45_0.608_0 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.017612 0.0 0.982388 0.0 0.940958 0.015897 0.0 0.043145 0.0 0.072726 0.927274 0.0 0.29566 0.101742 0.574182 0.028416 0.080019 0.048552 0.657908 0.213521 0.058701 0.049423 0.800057 0.091819 0.040459 0.892758 0.042676 0.024108 0.006605 0.009873 0.983522 0.0 0.135882 0.667535 0.07282 0.123763 MOTIF Stomach_P0_H3K4me2_63_90_0.544_7.081718e-97 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.015042 0.011376 0.973582 0.0 0.921215 0.0 0.0 0.078785 0.0 0.008404 0.991596 0.0 0.348507 0.028291 0.525018 0.098185 0.098534 0.046003 0.821982 0.033482 0.032239 0.057347 0.819595 0.090819 0.398797 0.544002 0.025405 0.031796 0.015441 0.022562 0.95564 0.006357 0.161868 0.723866 0.0 0.114266