MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Liver_E14.5_H3K9me3_38_104_0.522_0.0004870587
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.41587	0.109315	0.404124	0.070691
0.985267	0.014733	0.0	0.0
0.012545	0.008877	0.0	0.978579
0.008367	0.108871	0.018314	0.864448
0.011592	0.86533	0.0	0.123077
0.004503	0.068213	0.179095	0.748189
0.0	0.829178	0.166743	0.004079
0.039336	0.0419	0.01746	0.901304
0.0	0.133205	0.866795	0.0

MOTIF	Lung_E15.5_H3K9me3_53_130_0.510_0.006649294
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.734537	0.206987	0.041634	0.016842
0.009685	0.664625	0.305064	0.020626
0.133516	0.797846	0.068638	0.0
0.907892	0.044405	0.024703	0.023
0.012556	0.014735	0.941555	0.031154
0.804946	0.148923	0.014843	0.031288
0.059563	0.034341	0.894997	0.011098
0.855021	0.028776	0.004138	0.112065
0.761322	0.124519	0.05626	0.057899

MOTIF	Hindbrain_E11.5_H3K9me3_17_99_0.531_9.993661e-07
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.435343	0.183995	0.105328	0.275334
0.520567	0.25719	0.202626	0.019617
0.048676	0.050129	0.073014	0.82818
0.01581	0.015494	0.048057	0.920638
0.002245	0.988095	0.00966	0.0
0.029368	0.027881	0.101369	0.841381
0.011442	0.916729	0.046628	0.025201
0.071819	0.005934	0.008673	0.913574
0.003505	0.021419	0.968029	0.007047

MOTIF	Limb_E15.5_H3K9me3_56_140_0.514_0.0003087446
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.61704	0.163247	0.01351	0.206204
0.726879	0.161683	0.108607	0.002831
0.063448	0.157772	0.063996	0.714783
0.01191	0.011282	0.065794	0.911014
0.005175	0.914486	0.080339	0.0
0.041264	0.026839	0.115439	0.816458
0.027351	0.883526	0.084009	0.005114
0.053963	0.060489	0.026951	0.858597
0.011953	0.0	0.938223	0.049824

MOTIF	Hindbrain_P0_H3K9me3_18_97_0.527_1.400621e-08
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.196348	0.121487	0.01795	0.664214
0.625892	0.287199	0.018906	0.068003
0.004278	0.123977	0.021948	0.849797
0.015317	0.10283	0.005199	0.876654
0.025155	0.861261	0.029946	0.083638
0.054246	0.067371	0.06719	0.811193
0.14101	0.76173	0.064965	0.032296
0.033861	0.004088	0.016641	0.94541
0.030093	0.005848	0.925447	0.038612
0.056285	0.057334	0.692189	0.194192

MOTIF	Limb_E15.5_H3K9me3_20_103_0.522_1.189686e-07
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.859864	0.036379	0.059336	0.044422
0.014652	0.049248	0.288436	0.647664
0.027762	0.020702	0.006688	0.944849
0.006869	0.972951	0.009126	0.011054
0.044105	0.010609	0.08004	0.865247
0.071944	0.843824	0.032515	0.051717
0.018065	0.037784	0.108775	0.835376
0.007832	0.000673	0.914198	0.077297
0.202007	0.077919	0.671031	0.049042

MOTIF	Hindbrain_E14.5_H3K9me3_42_142_0.522_1.032794e-12
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.841398	0.107765	0.050837	0.0
0.007612	0.108103	0.040556	0.843729
0.011101	0.010793	0.051556	0.92655
0.030809	0.784754	0.045757	0.13868
0.007685	0.055196	0.036365	0.900754
0.052896	0.555942	0.207203	0.183959
0.05036	0.022357	0.007663	0.919621
0.059942	0.002658	0.894334	0.043066
0.132609	0.075219	0.783014	0.009158

MOTIF	Midbrain_E16.5_H3K9me3_10_106_0.531_1.506284e-30
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.84197	0.079615	0.056087	0.022328
0.007999	0.073297	0.243426	0.675279
0.005759	0.076182	0.06994	0.84812
0.016079	0.880176	0.046225	0.05752
0.01664	0.197632	0.016207	0.769521
0.090548	0.676413	0.123708	0.109332
0.047298	0.005584	0.018642	0.928476
0.028769	0.007295	0.957502	0.006434
0.118681	0.136245	0.684836	0.060238