MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_E16.5_H3K4me2_26_3_0.627_2.155436e-312
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.069018	0.740629	0.167947	0.022407
0.126012	0.702454	0.066166	0.105368
0.064522	0.063514	0.808273	0.063691
0.013803	0.787842	0.126674	0.071681
0.064687	0.802863	0.081158	0.051292
0.044575	0.708358	0.215694	0.031373
0.033287	0.813325	0.123754	0.029635
0.008035	0.01045	0.892772	0.088743
0.01773	0.92421	0.039729	0.018331
0.853456	0.0	0.089318	0.057226
0.0	0.056362	0.298456	0.645182
0.0	0.960151	0.039849	0.0

MOTIF	Lung_E16.5_H3K4me2_58_50_0.568_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.110442	0.889558	0.0	0.0
0.053617	0.0	0.885525	0.060858
0.095992	0.846974	0.027978	0.029056
0.023481	0.923955	0.01843	0.034135
0.117374	0.583886	0.06427	0.23447
0.012495	0.967167	0.020338	0.0
0.249301	0.044809	0.392548	0.313342
0.0	0.969035	0.030965	0.0
0.833721	0.0	0.0	0.166279

MOTIF	Limb_E15.5_H3K4me2_45_62_0.590_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.657669	0.237169	0.090264	0.014898
0.0	1.0	0.0	0.0
0.260052	0.0	0.72798	0.011968
0.0	0.84155	0.060433	0.098017
0.0	0.971286	0.019102	0.009611
0.011406	0.703378	0.018397	0.26682
0.056522	0.853943	0.021742	0.067794
0.050591	0.0	0.081515	0.867894
0.0	0.71041	0.03262	0.25697

MOTIF	Hindbrain_E13.5_H3K4me2_27_71_0.625_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.821304	0.0	0.122105	0.056592
0.0	1.0	0.0	0.0
0.041363	0.0	0.958637	0.0
0.0	1.0	0.0	0.0
0.014481	0.864149	0.01891	0.10246
0.041131	0.392186	0.173377	0.393305
0.0	0.95204	0.04796	0.0
0.031448	0.293732	0.040793	0.634027
0.0	0.819662	0.034423	0.145915

MOTIF	Forebrain_E14.5_H3K4me2_63_85_0.573_1.223616e-210
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.836877	0.0	0.068341	0.094782
0.0	0.989742	0.0	0.010258
0.183997	0.018274	0.783422	0.014307
0.0	0.923039	0.046105	0.030856
0.082232	0.55699	0.070757	0.290021
0.008245	0.717694	0.0835	0.190561
0.010227	0.87979	0.034186	0.075797
0.065066	0.0	0.0	0.934934
0.0	0.828824	0.045175	0.126001

MOTIF	Midbrain_P0_H3K4me2_65_105_0.558_7.837828e-150
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.881717	0.0	0.062104	0.05618
0.0	0.986088	0.0	0.013912
0.230391	0.0	0.725232	0.044377
0.0	0.955206	0.019808	0.024985
0.091493	0.849362	0.028221	0.030924
0.005134	0.328776	0.081145	0.584946
0.00524	0.840836	0.084564	0.06936
0.040656	0.0	0.05371	0.905634
0.0	0.961901	0.038099	0.0

MOTIF	Forebrain_E14.5_H3K9ac_43_62_0.579_9.413559e-309
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.674766	0.0	0.063341	0.261892
0.0	1.0	0.0	0.0
0.066283	0.0	0.933717	0.0
0.0	0.902586	0.051353	0.04606
0.0	0.771622	0.228378	0.0
0.036625	0.356471	0.136958	0.469945
0.019026	0.913372	0.051794	0.015808
0.085902	0.0	0.048308	0.86579
0.0	0.979036	0.020964	0.0

MOTIF	Forebrain_E15.5_H3K9ac_64_60_0.563_1.364562e-201
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.518691	0.051573	0.05527	0.374467
0.013723	0.038225	0.948052	0.0
0.896952	0.019789	0.066492	0.016766
0.0	0.006453	0.988331	0.005215
0.234461	0.039103	0.678737	0.047699
0.057888	0.050771	0.882422	0.008919
0.421878	0.029326	0.46106	0.087735
0.071578	0.855007	0.061335	0.012079
0.010452	0.0	0.989548	0.0