MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Limb_E14.5_H3K27me3_39_148_0.516_0.0006590139
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.959267	0.0	0.036157	0.004576
0.0	0.0	1.0	0.0
0.879769	0.04717	0.070486	0.002576
0.944916	0.0	0.048261	0.006823
0.717849	0.034989	0.16173	0.085432
0.134012	0.03817	0.704438	0.123381
0.0	0.088696	0.896755	0.014549
0.031335	0.046288	0.751385	0.170992
0.066148	0.245137	0.688714	0.0

MOTIF	Forebrain_E12.5_H3K4me2_93_128_0.531_6.234662e-29
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.948562	0.0	0.051438
0.033449	0.396918	0.236591	0.333041
0.026002	0.859695	0.088304	0.025999
0.03633	0.892958	0.049869	0.020843
0.006877	0.387697	0.28327	0.322156
0.0	0.057516	0.070336	0.872148
0.0	0.083034	0.035221	0.881745
0.0	0.089657	0.0	0.910343
0.007175	0.95672	0.036106	0.0
0.011637	0.058225	0.0	0.930139

MOTIF	Forebrain_E16.5_H3K4me2_83_133_0.510_1.338496e-12
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0	0.933149	0.0	0.066851
0.026799	0.689453	0.0	0.283748
0.029593	0.80963	0.100853	0.059924
0.029035	0.889498	0.03319	0.048277
0.033789	0.525174	0.407196	0.033842
0.004028	0.010296	0.037895	0.94778
0.00247	0.066804	0.03713	0.893596
0.0	0.0	0.0	1.0
0.0	1.0	0.0	0.0
0.001225	0.147325	0.0	0.851449

MOTIF	Midbrain_E12.5_H3K4me2_96_148_0.504_2.833742e-13
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.153252	0.276094	0.527855	0.042798
0.010016	0.954939	0.035044	0.0
0.013075	0.675569	0.247201	0.064155
0.031622	0.0	0.033295	0.935083
0.0	0.034531	0.046971	0.918499
0.0	0.020104	0.0	0.979896
0.016336	0.726336	0.257329	0.0
0.0	0.036415	0.0	0.963585
0.014145	0.586476	0.325365	0.074014
0.038613	0.840225	0.066875	0.054287

MOTIF	Cranio-Facial_E13.5_H3K4me2_89_144_0.510_1.331303e-19
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.015816	0.559515	0.358787	0.065882
0.059711	0.858934	0.03996	0.041394
0.026153	0.528498	0.401033	0.044317
0.035721	0.014958	0.05282	0.896501
0.0	0.066713	0.090959	0.842328
0.0	0.042806	0.009956	0.947238
0.0	0.991669	0.008331	0.0
0.004089	0.029501	0.0	0.96641
0.006866	0.665036	0.301159	0.026939

MOTIF	Hindbrain_E14.5_H3K4me2_93_146_0.506_2.22634e-07
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.029198	0.783063	0.097866	0.089873
0.0	0.888823	0.036049	0.075128
0.0	0.537136	0.415909	0.046956
0.104581	0.0	0.036735	0.858683
0.003801	0.011629	0.023865	0.960704
0.0	0.09548	0.0	0.90452
0.011721	0.869978	0.10245	0.015851
0.004832	0.020237	0.0	0.97493
0.013485	0.653971	0.284218	0.048326

MOTIF	Midbrain_E13.5_H3K4me2_105_143_0.503_3.075156e-05
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.011791	0.847094	0.080787	0.060328
0.035921	0.885874	0.047104	0.031101
0.0	0.535184	0.308744	0.156072
0.075313	0.045408	0.144215	0.735065
0.002167	0.071796	0.085333	0.840705
0.000875	0.0	0.020025	0.979099
0.015129	0.810181	0.151586	0.023105
0.007869	0.052255	0.0	0.939876
0.001776	0.728564	0.253558	0.016101
0.057139	0.334409	0.041576	0.566877

MOTIF	Midbrain_E14.5_H3K4me2_99_135_0.508_5.595021e-06
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.029584	0.823184	0.087778	0.059454
0.033733	0.91729	0.009074	0.039902
0.006633	0.641596	0.30586	0.045912
0.059907	0.025687	0.138444	0.775961
0.008547	0.110798	0.045631	0.835025
0.0	0.0	0.009995	0.990005
0.003321	0.851688	0.121986	0.023006
0.004049	0.107198	0.0	0.888754
0.008175	0.65525	0.262751	0.073823