MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Limb_E11.5_H3K4me1_106_115_0.501_0.001096979
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.292893	0.295893	0.0	0.411214
0.0	0.039048	0.851588	0.109364
0.053736	0.021504	0.76839	0.15637
0.0	0.013499	0.986501	0.0
0.0	0.044208	0.902869	0.052923
0.064242	0.906512	0.0	0.029246
0.922825	0.008527	0.039089	0.029558
0.0	0.0	1.0	0.0
0.846752	0.09629	0.034623	0.022335

MOTIF	Forebrain_E13.5_H3K27ac_101_60_0.502_0.000241322
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.99187	0.00813	0.0
0.029852	0.054808	0.156144	0.759195
0.007327	0.010929	0.730843	0.2509
0.007271	0.924077	0.041601	0.02705
0.067689	0.643559	0.234809	0.053944
0.093674	0.805213	0.027906	0.073208
0.088901	0.841256	0.048385	0.021458
0.188246	0.013049	0.067864	0.730841
0.0	0.979309	0.020691	0.0

MOTIF	Hindbrain_E12.5_H3K27ac_81_60_0.512_1.70981e-11
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.0032	0.967937	0.008767	0.020095
0.032257	0.059165	0.14193	0.766649
0.005535	0.014929	0.798507	0.181028
0.06978	0.764359	0.029647	0.136213
0.043231	0.699329	0.193072	0.064368
0.115192	0.801867	0.031226	0.051714
0.099917	0.82847	0.028728	0.042884
0.052305	0.011502	0.028697	0.907497
0.0	0.832956	0.0	0.167044
0.0	0.390305	0.160691	0.449004

MOTIF	Cranio-Facial_E14.5_H3K4me1_76_26_0.512_4.650305e-13
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.0	0.948475	0.037121	0.014404
0.0	0.304732	0.202052	0.493216
0.021175	0.047767	0.899256	0.031802
0.013219	0.9133	0.005031	0.068451
0.006892	0.914241	0.036839	0.042028
0.159069	0.787768	0.027663	0.0255
0.047135	0.753531	0.195771	0.003564
0.014335	0.097023	0.045789	0.842853
0.001301	0.95703	0.0	0.04167
0.0	0.0	0.390664	0.609336
0.0	0.610698	0.334634	0.054669

MOTIF	Hindbrain_E13.5_H3K4me1_53_47_0.517_1.411491e-43
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.969551	0.030449	0.0
0.043587	0.235376	0.146965	0.574072
0.0	0.054138	0.945862	0.0
0.022486	0.937666	0.021253	0.018595
0.0	0.887074	0.032227	0.0807
0.111945	0.830572	0.050263	0.00722
0.022329	0.605117	0.008175	0.36438
0.022755	0.0	0.100447	0.876798
0.0	0.880512	0.0	0.119488

MOTIF	Kidney_P0_H3K4me1_34_16_0.520_2.179981e-21
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.0	0.93517	0.034363	0.030467
0.045718	0.005705	0.152473	0.796103
0.0	0.020395	0.728066	0.251539
0.181189	0.727852	0.0	0.09096
0.023028	0.584557	0.327443	0.064972
0.139031	0.81329	0.009388	0.038292
0.018736	0.939314	0.01033	0.031621
0.036593	0.070156	0.04075	0.852501
0.0	0.947403	0.023507	0.029089
0.0	0.087822	0.892682	0.019495
0.0	0.095874	0.879391	0.024734

MOTIF	Midbrain_E11.5_H3K4me1_93_114_0.503_8.067306e-07
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.968383	0.0	0.031617
0.0	0.029401	0.045058	0.925541
0.010549	0.019578	0.444412	0.52546
0.031149	0.893759	0.034859	0.040233
0.032533	0.928394	0.0	0.039073
0.159147	0.692053	0.014881	0.133919
0.045296	0.67937	0.008379	0.266955
0.047687	0.030523	0.071666	0.850124
0.0	0.920508	0.013253	0.066239

MOTIF	Neural-Tube_E12.5_H3K4me1_72_43_0.512_5.629596e-22
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.002475	0.938181	0.025597	0.033747
0.00525	0.183857	0.101005	0.709888
0.017421	0.025782	0.70841	0.248387
0.045857	0.830335	0.058975	0.064833
0.010284	0.808139	0.147261	0.034316
0.06906	0.864289	0.018559	0.048092
0.038346	0.891498	0.023111	0.047044
0.225902	0.012935	0.054482	0.706681
0.0	0.926836	0.020405	0.052759