MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_P0_H3K4me2_56_91_0.576_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.04499	0.652296	0.302714
0.090104	0.029471	0.86868	0.011745
0.033187	0.772447	0.179211	0.015155
0.826275	0.0	0.147638	0.026088
0.008779	0.164307	0.826914	0.0
0.169849	0.686347	0.048303	0.095501
0.068977	0.160957	0.76282	0.007246
0.363649	0.438641	0.0	0.19771
0.0	0.70025	0.279844	0.019906

MOTIF	Cranio-Facial_E14.5_H3K4me2_69_97_0.548_3.910063e-102
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.167283	0.032167	0.720862	0.079688
0.223632	0.056813	0.661962	0.057593
0.024725	0.650088	0.314345	0.010842
0.028679	0.022346	0.917599	0.031376
0.0	0.986436	0.013564	0.0
0.035927	0.009104	0.022781	0.932188
0.0	0.213144	0.778616	0.008239
0.017862	0.851968	0.053923	0.076247
0.854592	0.078169	0.0	0.067239

MOTIF	Intestine_E15.5_H3K4me2_72_99_0.548_3.803637e-104
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.97369	0.0	0.02631	0.0
0.002809	0.024166	0.923375	0.049651
0.094872	0.122722	0.480344	0.302062
0.004403	0.841294	0.154304	0.0
0.112944	0.038719	0.819895	0.028443
0.0	0.945788	0.054212	0.0
0.069127	0.035976	0.023545	0.871353
0.0	0.301146	0.698854	0.0
0.050968	0.752288	0.018713	0.178031

MOTIF	Forebrain_E14.5_H3K4me2_77_107_0.543_5.848624e-59
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.028138	0.126058	0.845803	0.0
0.358286	0.026013	0.342089	0.273612
0.0497	0.843684	0.106616	0.0
0.253444	0.034261	0.664924	0.047371
0.0	1.0	0.0	0.0
0.05171	0.0	0.052883	0.895406
0.0	0.0	1.0	0.0
0.0	0.945468	0.037296	0.017236
0.887625	0.0	0.07395	0.038425

MOTIF	Hindbrain_E11.5_H3K4me2_58_107_0.593_1.030787e-281
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.136874	0.071169	0.791957	0.0
0.203	0.092194	0.287476	0.41733
0.010667	0.967502	0.014946	0.006885
0.051556	0.037456	0.879774	0.031214
0.0	0.979098	0.020902	0.0
0.017885	0.0	0.0	0.982115
0.003657	0.030878	0.965465	0.0
0.0	0.675925	0.059289	0.264786
0.749291	0.200461	0.0	0.050248

MOTIF	Intestine_E15.5_H3K4me2_99_66_0.513_1.714149e-58
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.093668	0.061841	0.168761	0.67573
0.296713	0.081146	0.606093	0.016048
0.0	0.96673	0.03327	0.0
0.958561	0.03157	0.006517	0.003352
0.001433	0.00518	0.986513	0.006875
0.0951	0.789159	0.073145	0.042596
0.001735	0.023807	0.966499	0.007959
0.321201	0.292447	0.0	0.386352
0.0	0.925955	0.074045	0.0
0.762883	0.12589	0.010352	0.100875

MOTIF	Limb_E12.5_H3K4me2_71_86_0.553_1.116895e-183
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.213671	0.037835	0.748494	0.0
0.071887	0.0	0.872218	0.055895
0.097518	0.878167	0.0	0.024315
0.143438	0.0	0.839863	0.016699
0.0	1.0	0.0	0.0
0.0	0.070496	0.0	0.929504
0.0	0.0	1.0	0.0
0.0	0.389145	0.176258	0.434597
0.788808	0.149703	0.02461	0.036879

MOTIF	Hindbrain_E12.5_H3K4me3_44_168_0.628_0
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.209	0.001	0.789	0.001
0.01	0.001	0.988	0.001
0.001	0.997	0.001	0.001
0.001	0.001	0.997	0.001
0.377	0.601	0.019	0.003
0.001	0.001	0.001	0.997
0.001	0.001	0.997	0.001
0.001	0.22	0.001	0.778