MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_P0_H3K9me3_96_161_0.507_3.506847e-06
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.084	0.001	0.914	0.001
0.001	0.997	0.001	0.001
0.997	0.001	0.001	0.001
0.963	0.001	0.035	0.001
0.978	0.02	0.001	0.001
0.997	0.001	0.001	0.001
0.001	0.001	0.001	0.997
0.997	0.001	0.001	0.001
0.001	0.001	0.001	0.997
0.997	0.001	0.001	0.001
0.997	0.001	0.001	0.001
0.001	0.001	0.997	0.001

MOTIF	Lung_E15.5_H3K9me3_4_141_0.531_7.388655e-06
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.770289	0.056598	0.173113	0.0
0.002982	0.026624	0.007942	0.962452
0.706493	0.0	0.293507	0.0
0.01303	0.0	0.016598	0.970371
0.0	0.0	0.139243	0.860757
0.002023	0.0	0.115004	0.882973
0.126092	0.0	0.034625	0.839283
0.0	0.046045	0.838171	0.115784
0.0	0.962967	0.037033	0.0

MOTIF	Midbrain_P0_H3K9me3_24_107_0.530_4.094439e-15
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.915325	0.0	0.050057	0.034618
0.0	0.007863	0.010903	0.981234
0.651561	0.0	0.348439	0.0
0.0	0.0	0.0	1.0
0.115807	0.032856	0.026434	0.824903
0.027935	0.130044	0.035071	0.80695
0.049814	0.001602	0.127892	0.820692
0.021886	0.056835	0.898851	0.022428
0.013575	0.642429	0.31267	0.031326

MOTIF	Hindbrain_P0_H3K9me3_83_129_0.512_3.813044e-09
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.952008	0.013079	0.017951	0.016962
0.39195	0.204335	0.403714	0.0
0.954454	0.026165	0.019381	0.0
0.968822	0.005809	0.013315	0.012054
0.008292	0.088635	0.021719	0.881355
0.957377	0.0	0.042623	0.0
0.002544	0.058192	0.035849	0.903415
0.711401	0.251984	0.020931	0.015684
0.822528	0.054423	0.051021	0.072028

MOTIF	Forebrain_E14.5_H3K9me3_86_69_0.509_1.598801e-08
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.383134	0.16763	0.222991	0.226245
0.017157	0.949089	0.033753	0.0
0.905474	0.064092	0.00771	0.022724
0.583181	0.131972	0.284847	0.0
0.938542	0.032324	0.021134	0.008
0.835938	0.132044	0.032018	0.0
0.085837	0.045233	0.044064	0.824866
0.935762	0.0	0.037304	0.026934
0.04324	0.142599	0.007056	0.807105
0.829725	0.142575	0.0	0.0277

MOTIF	Hindbrain_E14.5_H3K9me3_98_117_0.512_6.430011e-09
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.045826	0.732622	0.196162	0.02539
0.812469	0.118627	0.013436	0.055468
0.782391	0.012989	0.195406	0.009215
0.832117	0.059734	0.06018	0.047969
0.911176	0.067281	0.002472	0.019071
0.060725	0.109656	0.009423	0.820196
0.805146	0.008479	0.168343	0.018032
0.059167	0.009609	0.125418	0.805805
0.724949	0.049621	0.093929	0.1315

MOTIF	Midbrain_E14.5_H3K9me3_39_90_0.520_5.351927e-16
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.440061	0.217023	0.29901	0.043905
0.082888	0.845184	0.039072	0.032856
0.913593	0.028354	0.019172	0.038881
0.668841	0.00466	0.324332	0.002167
0.908608	0.044818	0.02695	0.019624
0.976521	0.006799	0.010203	0.006477
0.035462	0.133912	0.039849	0.790777
0.970213	0.002795	0.022239	0.004753
0.016178	0.099944	0.116057	0.767821
0.793726	0.079909	0.090297	0.036067

MOTIF	Midbrain_E16.5_H3K9me3_81_132_0.511_2.032591e-10
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.95677	0.04323	0.0
0.924962	0.036013	0.011779	0.027246
0.645887	0.023196	0.314565	0.016352
0.871801	0.024327	0.103872	0.0
0.855798	0.090389	0.0	0.053813
0.071925	0.259435	0.0	0.668639
0.790287	0.010968	0.193908	0.004837
0.04189	0.040859	0.040028	0.877223
0.917064	0.023055	0.056457	0.003425

MOTIF	Midbrain_P0_H3K9me3_39_133_0.524_2.752822e-08
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.029376	0.941533	0.005718	0.023373
0.961826	0.008782	0.001736	0.027656
0.513539	0.047742	0.39113	0.047589
0.861495	0.052477	0.063069	0.02296
0.936156	0.047658	0.007268	0.008918
0.052596	0.131009	0.026608	0.789788
0.753381	0.008162	0.213024	0.025433
0.0	0.032075	0.022556	0.945368
0.776519	0.127674	0.072918	0.022889