MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_P0_H3K9me3_5_154_0.541_1.299953e-24
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.149	0.011	0.304	0.536
0.275	0.14	0.556	0.029
0.726	0.001	0.224	0.049
0.024	0.04	0.624	0.312
0.252	0.661	0.06	0.027
0.025	0.643	0.022	0.31
0.644	0.013	0.006	0.337
0.385	0.145	0.442	0.027
0.49	0.255	0.198	0.058
0.746	0.006	0.013	0.235
0.128	0.196	0.268	0.408
0.581	0.171	0.223	0.025

MOTIF	Hindbrain_E16.5_H3K9me3_8_161_0.538_2.610758e-32
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.008	0.001	0.001	0.99
0.042	0.004	0.953	0.001
0.996	0.001	0.002	0.001
0.001	0.001	0.997	0.001
0.001	0.997	0.001	0.001
0.007	0.988	0.001	0.004
0.997	0.001	0.001	0.001
0.254	0.031	0.708	0.007
0.997	0.001	0.001	0.001
0.988	0.007	0.004	0.001
0.018	0.422	0.115	0.446
0.994	0.004	0.001	0.001

MOTIF	Hindbrain_P0_H3K9me3_4_160_0.539_9.837754e-21
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.002	0.001	0.319	0.678
0.094	0.088	0.573	0.245
0.823	0.012	0.001	0.164
0.091	0.001	0.758	0.15
0.03	0.932	0.001	0.037
0.001	0.893	0.001	0.105
0.968	0.001	0.001	0.03
0.531	0.083	0.385	0.001
0.916	0.001	0.082	0.001
0.997	0.001	0.001	0.001
0.022	0.175	0.252	0.551
0.818	0.038	0.096	0.048

MOTIF	Intestine_E14.5_H3K9me3_78_113_0.515_7.721038e-14
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.17456	0.265951	0.176887	0.382602
0.096882	0.0852	0.817918	0.0
0.933705	0.00502	0.014506	0.046768
0.022042	0.0473	0.828374	0.102283
0.276605	0.601143	0.007939	0.114313
0.032252	0.840608	0.011673	0.115467
0.887918	0.014042	0.09197	0.006069
0.105713	0.071602	0.816125	0.00656
0.847827	0.030645	0.112043	0.009484
0.964003	0.0	0.034462	0.001535

MOTIF	Midbrain_E14.5_H3K9me3_15_113_0.530_4.570174e-18
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.147844	0.020921	0.769147	0.062088
0.917519	0.055819	0.025881	0.000781
0.098945	0.048413	0.830998	0.021644
0.063641	0.855456	0.063807	0.017096
0.023411	0.817719	0.004267	0.154603
0.815283	0.048487	0.02179	0.11444
0.166656	0.069921	0.737385	0.026038
0.768817	0.18742	0.005104	0.038659
0.897256	0.007956	0.05742	0.037368

MOTIF	Heart_E13.5_H3K9me3_39_136_0.534_3.32352e-67
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.324992	0.00962	0.638839	0.026549
0.920396	0.008034	0.048411	0.023159
0.108359	0.041734	0.75804	0.091866
0.081554	0.908217	0.006612	0.003616
0.00678	0.874247	0.002026	0.116947
0.675442	0.099893	0.012621	0.212044
0.089441	0.115065	0.779267	0.016227
0.933544	0.013241	0.016109	0.037106
0.82449	0.027787	0.099425	0.048298

MOTIF	Neural-Tube_E13.5_H3K9me3_21_116_0.534_2.127392e-35
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.236159	0.065777	0.63224	0.065824
0.910961	0.000987	0.079572	0.00848
0.011508	0.091615	0.81616	0.080718
0.009227	0.907104	0.077325	0.006345
0.012386	0.963459	0.001657	0.022498
0.738656	0.056449	0.005748	0.199147
0.180071	0.156183	0.658025	0.005721
0.916132	0.026994	0.030593	0.026281
0.835672	0.021106	0.055355	0.087867

MOTIF	Midbrain_E13.5_H3K9me3_6_158_0.538_1.348705e-38
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.001	0.303	0.001	0.695
0.001	0.001	0.181	0.817
0.001	0.001	0.001	0.997
0.001	0.133	0.865	0.001
0.766	0.024	0.209	0.001
0.132	0.001	0.744	0.123
0.001	0.828	0.001	0.17
0.001	0.975	0.023	0.001
0.997	0.001	0.001	0.001
0.289	0.001	0.709	0.001
0.997	0.001	0.001	0.001
0.997	0.001	0.001	0.001

MOTIF	Hindbrain_E14.5_H3K9me3_32_172_0.524_7.11003e-26
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.001	0.001	0.001	0.997
0.001	0.001	0.001	0.997
0.001	0.014	0.979	0.006
0.876	0.001	0.121	0.002
0.05	0.008	0.931	0.011
0.021	0.943	0.016	0.02
0.001	0.969	0.001	0.029
0.958	0.001	0.004	0.037
0.047	0.047	0.905	0.001
0.968	0.001	0.02	0.011
0.992	0.006	0.001	0.001
0.042	0.826	0.02	0.112

MOTIF	Neural-Tube_E13.5_H3K9me3_49_172_0.526_1.096272e-19
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.001	0.001	0.001	0.997
0.001	0.001	0.001	0.997
0.001	0.997	0.001	0.001
0.001	0.001	0.001	0.997
0.001	0.001	0.997	0.001
0.001	0.001	0.997	0.001
0.122	0.8	0.001	0.077
0.001	0.001	0.001	0.997
0.001	0.997	0.001	0.001
0.997	0.001	0.001	0.001
0.997	0.001	0.001	0.001
0.997	0.001	0.001	0.001