MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_E15.5_H3K9me3_16_64_0.534_1.041208e-18
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.686714	0.164827	0.039559	0.108899
0.045343	0.042515	0.024521	0.88762
0.070454	0.010181	0.862747	0.056619
0.007054	0.022312	0.944029	0.026605
0.814011	0.009378	0.085933	0.090679
0.914517	0.046325	0.032135	0.007023
0.081682	0.024321	0.134595	0.759402
0.95292	0.014762	0.022769	0.00955
0.039584	0.490746	0.158976	0.310694

MOTIF	Hindbrain_E15.5_H3K9me3_22_94_0.534_2.050211e-25
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.380305	0.393111	0.125673	0.100911
0.836226	0.091789	0.059938	0.012047
0.098232	0.001869	0.146153	0.753746
0.021132	0.041912	0.86497	0.071986
0.021251	0.058275	0.888826	0.031648
0.851357	0.009922	0.020884	0.117837
0.952202	0.006679	0.030562	0.010556
0.155481	0.021776	0.1208	0.701943
0.960056	0.007384	0.030287	0.002273
0.214031	0.309028	0.279378	0.197563

MOTIF	Limb_E11.5_H3K9me3_38_174_0.522_3.88582e-05
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.518	0.001	0.322	0.159
0.001	0.001	0.001	0.997
0.997	0.001	0.001	0.001
0.001	0.001	0.001	0.997
0.001	0.31	0.001	0.688
0.001	0.997	0.001	0.001
0.31	0.688	0.001	0.001
0.857	0.141	0.001	0.001

MOTIF	Kidney_P0_H3K9me3_25_179_0.524_9.022189e-05
letter-probability matrix: alength= 4 w= 8 nsites= 100 E= 1.0e-1
0.001	0.997	0.001	0.001
0.001	0.042	0.072	0.885
0.001	0.001	0.997	0.001
0.001	0.001	0.831	0.167
0.997	0.001	0.001	0.001
0.997	0.001	0.001	0.001
0.001	0.001	0.001	0.997
0.997	0.001	0.001	0.001

MOTIF	Forebrain_P0_H3K9me3_63_56_0.519_1.688736e-08
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.789065	0.069184	0.126696	0.015056
0.033918	0.155408	0.013864	0.79681
0.866242	0.023228	0.08886	0.02167
0.009948	0.027071	0.023273	0.939708
0.17128	0.128095	0.025669	0.674956
0.112164	0.797448	0.054534	0.035854
0.026283	0.883447	0.001313	0.088957
0.890978	0.028707	0.018888	0.061427
0.047567	0.073114	0.745409	0.13391
0.316177	0.3918	0.249448	0.042574

MOTIF	Lung_E15.5_H3K9me3_10_72_0.525_4.974518e-06
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.902219	0.018936	0.046999	0.031846
0.022567	0.016856	0.027964	0.932613
0.784921	0.041804	0.142053	0.031222
0.006923	0.061682	0.028587	0.902808
0.051638	0.138261	0.0	0.810101
0.051928	0.822049	0.035335	0.090688
0.005916	0.875944	0.002763	0.115377
0.777875	0.095929	0.02237	0.103827
0.023959	0.101127	0.760631	0.114284

MOTIF	Neural-Tube_E14.5_H3K9me3_21_57_0.525_3.21232e-07
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.808705	0.034964	0.126454	0.029877
0.046378	0.041159	0.038774	0.873689
0.780581	0.052849	0.075372	0.091198
0.062103	0.035891	0.038241	0.863765
0.037579	0.093073	0.051143	0.818206
0.119388	0.805227	0.019165	0.056219
0.017879	0.9244	0.018621	0.039099
0.780554	0.035306	0.008209	0.17593
0.052707	0.076812	0.733184	0.137297

MOTIF	Lung_E15.5_H3K9me3_44_79_0.511_0.0009370016
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.00924	0.154705	0.64578	0.190274
0.645936	0.139648	0.15864	0.055775
0.087385	0.883574	0.019619	0.009422
0.024515	0.81195	0.148083	0.015451
0.142694	0.042701	0.013913	0.800692
0.030183	0.017164	0.938375	0.014278
0.028362	0.023868	0.865382	0.082388
0.883371	0.016124	0.078347	0.022157
0.854301	0.089776	0.046347	0.009575
0.186951	0.379981	0.199966	0.233102

MOTIF	Liver_E14.5_H3K9me3_52_80_0.511_0.008225466
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.02808	0.89047	0.010928	0.070522
0.083076	0.834835	0.012077	0.070012
0.066282	0.021262	0.063156	0.849301
0.076541	0.023309	0.862537	0.037613
0.023178	0.024519	0.809123	0.14318
0.874576	0.027624	0.059553	0.038248
0.873259	0.048061	0.035028	0.043651
0.04473	0.159902	0.181282	0.614085
0.776286	0.065722	0.139742	0.01825

MOTIF	Neural-Tube_E14.5_H3K9me3_66_74_0.510_0.0001463378
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.752922	0.039928	0.091155	0.115995
0.02088	0.892517	0.065931	0.020672
0.069218	0.880219	0.039539	0.011024
0.219859	0.048025	0.00926	0.722856
0.089842	0.024618	0.856587	0.028953
0.059398	0.014581	0.83031	0.095711
0.750879	0.067822	0.12965	0.051648
0.887919	0.038454	0.036604	0.037023
0.06929	0.072729	0.165182	0.692799

MOTIF	Stomach_P0_H3K9me3_53_60_0.515_0.002815327
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.894934	0.016635	0.038629	0.049803
0.029416	0.814987	0.133112	0.022485
0.080636	0.77811	0.125671	0.015583
0.066558	0.07785	0.024315	0.831277
0.042884	0.00648	0.913751	0.036886
0.095763	0.021817	0.854632	0.027788
0.805616	0.088285	0.084793	0.021306
0.815549	0.037056	0.117266	0.03013
0.12466	0.035443	0.190639	0.649259
0.283862	0.149526	0.414735	0.151878