MEME version 4 ALPHABET= ACGT strands: + - Background letter frequencies A 0.25 C 0.25 G 0.25 T 0.25 MOTIF Hindbrain_E14.5_H3K9me3_108_145_0.509_8.212668e-12 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.914696 0.045416 0.028325 0.011563 0.805859 0.025361 0.114089 0.05469 0.298955 0.445635 0.211223 0.044186 0.051898 0.213772 0.064164 0.670167 0.96165 0.000885 0.019455 0.018011 0.002915 0.065195 0.929029 0.002861 0.968577 0.003158 0.023026 0.005239 0.94173 0.009877 0.02664 0.021753 0.975737 0.013291 0.0 0.010971 0.094091 0.197387 0.501267 0.207255 MOTIF Midbrain_E16.5_H3K9me3_52_134_0.519_1.550513e-14 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.635787 0.165348 0.007469 0.191396 0.745356 0.122522 0.104063 0.028058 0.070254 0.848004 0.070651 0.011091 0.25678 0.276386 0.00282 0.464014 0.981329 0.001748 0.0 0.016924 0.0 0.019045 0.952091 0.028864 0.932353 0.011526 0.056121 0.0 0.95568 0.009112 0.004059 0.031149 0.968581 0.002837 0.016426 0.012156 MOTIF Midbrain_P0_H3K9me3_33_148_0.527_3.22461e-10 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.692977 0.154484 0.023668 0.128871 0.679288 0.164699 0.131238 0.024775 0.059424 0.876163 0.050158 0.014255 0.102397 0.371575 0.004448 0.52158 0.935727 0.005001 0.047842 0.011431 0.008238 0.056843 0.914386 0.020534 0.95802 0.010029 0.025916 0.006036 0.936709 0.013927 0.019868 0.029496 0.868825 0.005674 0.100498 0.025003 MOTIF Neural-Tube_E13.5_H3K9me3_65_115_0.522_5.359117e-15 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.349763 0.0 0.417378 0.23286 0.66713 0.123144 0.201632 0.008093 0.91536 0.030913 0.043466 0.010261 0.051528 0.91334 0.0 0.035133 0.045563 0.246705 0.016161 0.69157 0.985656 0.006604 0.00774 0.0 0.0 0.012198 0.987802 0.0 0.97698 0.0 0.02302 0.0 0.930449 0.0 0.0 0.069551 MOTIF Forebrain_E14.5_H3K9me3_53_117_0.515_1.404991e-05 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.04354 0.17331 0.629337 0.153813 0.758103 0.208989 0.02115 0.011758 0.576755 0.218172 0.205073 0.0 0.057826 0.80955 0.132624 0.0 0.0 0.013832 0.0 0.986168 0.900399 0.001974 0.081041 0.016586 0.0 0.013371 0.913552 0.073077 0.990091 0.0 0.009909 0.0 0.965082 0.0 0.034918 0.0 MOTIF Hindbrain_E14.5_H3K9me3_56_116_0.518_2.849796e-20 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.0 0.006594 0.952353 0.041053 0.807797 0.001112 0.070399 0.120692 0.578595 0.268522 0.11717 0.035713 0.25713 0.590578 0.042956 0.109337 0.029689 0.036608 0.160302 0.773401 0.838578 0.000902 0.077416 0.083104 0.009109 0.003298 0.95045 0.037144 0.981923 0.0 0.01361 0.004467 0.990762 0.0 0.003084 0.006154 MOTIF Hindbrain_E15.5_H3K9me3_63_69_0.522_4.275735e-23 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.460223 0.058523 0.386569 0.094685 0.021886 0.009699 0.926015 0.0424 0.930034 0.02763 0.01177 0.030566 0.688521 0.134629 0.151355 0.025495 0.176025 0.733344 0.080718 0.009913 0.061114 0.233427 0.048972 0.656487 0.870399 0.025141 0.040945 0.063515 0.042085 0.034217 0.905021 0.018677 0.949049 0.024841 0.022568 0.003542 0.933407 0.00191 0.06248 0.002203 MOTIF Midbrain_E15.5_H3K9me3_43_117_0.526_6.370135e-16 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.018526 0.025188 0.892749 0.063537 0.916889 0.006037 0.070211 0.006863 0.574617 0.15916 0.260111 0.006113 0.148457 0.753543 0.065725 0.032274 0.03642 0.212452 0.049685 0.701443 0.83913 0.024465 0.087019 0.049385 0.075854 0.049757 0.848022 0.026366 0.975377 0.013308 0.011314 0.0 0.915685 0.030438 0.022089 0.031789 0.221557 0.191511 0.341895 0.245037 MOTIF Neural-Tube_E15.5_H3K9me3_22_22_0.532_3.758643e-30 letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1 0.029554 0.043637 0.887568 0.039241 0.967782 0.011061 0.020667 0.00049 0.654077 0.020322 0.298475 0.027125 0.084375 0.89133 0.006889 0.017406 0.012934 0.330919 0.002318 0.653828 0.950357 0.011549 0.036451 0.001642 0.073601 0.020855 0.892601 0.012943 0.974477 0.001207 0.024316 0.0 0.898002 0.034764 0.064131 0.003102 0.463358 0.317812 0.128084 0.090747 MOTIF Forebrain_E15.5_H3K9me3_74_87_0.517_7.079e-12 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.194078 0.0 0.805922 0.0 0.0 0.024748 0.975252 0.0 0.956603 0.028272 0.015126 0.0 0.894637 0.047949 0.034579 0.022836 0.270233 0.646723 0.056369 0.026675 0.049902 0.149311 0.007571 0.793216 0.779159 0.003529 0.138827 0.078485 0.142896 0.007612 0.803462 0.04603 0.846484 0.005957 0.128513 0.019045 MOTIF Neural-Tube_E15.5_H3K9me3_70_108_0.517_1.528676e-13 letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1 0.030298 0.001375 0.968327 0.0 0.10413 0.0 0.882467 0.013403 0.935644 0.003854 0.060012 0.00049 0.763785 0.118539 0.099913 0.017764 0.058661 0.922394 0.013711 0.005233 0.162898 0.097137 0.011955 0.728009 0.722819 0.006407 0.235565 0.035209 0.115691 0.05812 0.656237 0.169952 0.859453 0.02716 0.098779 0.014609