MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_E15.5_H3K4me3_31_25_0.667_5.435922e-309
letter-probability matrix: alength= 4 w= 12 nsites= 100 E= 1.0e-1
0.28882	0.30082	0.388982	0.021378
0.07442	0.703076	0.039479	0.183025
0.179769	0.703064	0.053274	0.063892
0.0	0.030414	0.941965	0.027621
0.31946	0.034606	0.595814	0.05012
0.036453	0.023382	0.891835	0.04833
0.046246	0.033311	0.889618	0.030826
0.072587	0.027879	0.887004	0.01253
0.141987	0.65059	0.010733	0.19669
0.0	0.0	1.0	0.0
0.077878	0.497469	0.0	0.424653
0.0	0.012765	0.628973	0.358262

MOTIF	Kidney_E14.5_H3K4me3_47_50_0.619_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.007058	0.032725	0.89729	0.062927
0.051314	0.59698	0.038078	0.313628
0.181803	0.748698	0.027715	0.041784
0.02269	0.735713	0.073351	0.168246
0.041209	0.740719	0.05075	0.167322
0.053245	0.911343	0.020463	0.014949
0.044532	0.0	0.88745	0.068018
0.091829	0.00916	0.884456	0.014555
0.040304	0.872481	0.051477	0.035738

MOTIF	Limb_E15.5_H3K4me3_28_76_0.665_1.388967e-314
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.0	0.865595	0.134405	0.0
0.0	0.0	1.0	0.0
0.139098	0.0	0.648639	0.212262
0.027313	0.0	0.755574	0.217112
0.085079	0.027887	0.777456	0.109578
0.011134	0.083748	0.86463	0.040488
0.088162	0.866192	0.0	0.045646
0.0	0.004779	0.983441	0.011781
0.79377	0.0	0.0	0.20623

MOTIF	Hindbrain_E14.5_H3K4me3_18_15_0.707_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.022857	0.94618	0.0	0.030963
0.028648	0.789636	0.041391	0.140325
0.016989	0.032509	0.930299	0.020203
0.166757	0.041081	0.662893	0.129269
0.041718	0.066463	0.795659	0.09616
0.251025	0.032755	0.526758	0.189462
0.037781	0.048139	0.883634	0.030446
0.063525	0.808202	0.039977	0.088296
0.017315	0.034247	0.915906	0.032532
0.526415	0.312575	0.0	0.16101

MOTIF	Liver_E15.5_H3K4me3_27_28_0.653_0
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.008852	0.041538	0.326188	0.623422
0.082998	0.808247	0.0	0.108755
0.14587	0.787072	0.026831	0.040228
0.013489	0.023763	0.93978	0.022968
0.03628	0.046372	0.738231	0.179117
0.036317	0.006127	0.903122	0.054434
0.029031	0.024304	0.757147	0.189519
0.032247	0.069532	0.690775	0.207446
0.032702	0.854552	0.024676	0.08807
0.030972	0.027696	0.906263	0.03507

MOTIF	Lung_E16.5_H3K4me3_37_16_0.629_2.387111e-309
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.158056	0.206206	0.06463	0.571108
0.027634	0.929231	0.023505	0.01963
0.068906	0.86922	0.024484	0.03739
0.047108	0.081063	0.736836	0.134993
0.151512	0.046527	0.779456	0.022505
0.0475	0.030477	0.702941	0.219083
0.068548	0.014244	0.903097	0.014112
0.242868	0.051284	0.670203	0.035645
0.038105	0.891825	0.044074	0.025996
0.007358	0.029723	0.928249	0.03467
0.598807	0.093286	0.0	0.307906

MOTIF	Midbrain_E13.5_H3K4me3_22_14_0.691_2.25313e-312
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.079659	0.37874	0.27703	0.264571
0.027662	0.923682	0.026783	0.021873
0.032373	0.876512	0.019811	0.071304
0.016952	0.075493	0.770662	0.136894
0.097433	0.047149	0.837345	0.018074
0.119545	0.039858	0.770297	0.0703
0.073334	0.073852	0.745952	0.106862
0.179866	0.050105	0.611363	0.158666
0.157791	0.774617	0.023101	0.044491
0.021504	0.051299	0.893131	0.034065

MOTIF	Midbrain_E11.5_H3K4me3_27_38_0.702_1.216737e-317
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.013641	0.919955	0.049041	0.017363
0.01161	0.945929	0.007334	0.035127
0.006223	0.076695	0.884073	0.033008
0.038079	0.047676	0.893009	0.021236
0.045373	0.073635	0.599108	0.281884
0.034985	0.024657	0.908329	0.03203
0.341167	0.0	0.628939	0.029894
0.378077	0.578293	0.012712	0.030917
0.019586	0.028532	0.892062	0.059819

MOTIF	Neural-Tube_E13.5_H3K4me3_24_20_0.688_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.041275	0.897674	0.03114	0.029912
0.148003	0.804321	0.027815	0.01986
0.018643	0.024389	0.935009	0.021958
0.050462	0.068626	0.860868	0.020044
0.063752	0.044901	0.752357	0.138989
0.061839	0.025203	0.888378	0.024581
0.267789	0.063773	0.565298	0.10314
0.320256	0.653341	0.00597	0.020434
0.017864	0.049472	0.896376	0.036287

MOTIF	Hindbrain_E15.5_H3K4me3_24_31_0.685_0
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.014934	0.958055	0.0	0.027011
0.034001	0.888823	0.023237	0.053938
0.012252	0.027764	0.903805	0.056178
0.013836	0.01001	0.970267	0.005886
0.091644	0.044644	0.687958	0.175754
0.52044	0.007848	0.452252	0.019461
0.049513	0.072373	0.846373	0.031741
0.055434	0.65419	0.010813	0.279563
0.030065	0.027052	0.925192	0.017692

MOTIF	Neural-Tube_E14.5_H3K4me3_18_8_0.715_1.970686e-312
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.029897	0.907155	0.050397	0.01255
0.012539	0.855518	0.042443	0.0895
0.078507	0.018554	0.703371	0.199568
0.10379	0.810617	0.039912	0.045681
0.03043	0.660354	0.052128	0.257087
0.028007	0.840821	0.074892	0.05628
0.067908	0.684443	0.083467	0.164182
0.012254	0.882242	0.048543	0.056961
0.013764	0.045135	0.920323	0.020778
0.159896	0.128001	0.685344	0.02676
0.027706	0.129632	0.746771	0.095891