MEME version 4

ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.25 C 0.25 G 0.25 T 0.25

MOTIF	Forebrain_E15.5_H3K9me3_61_86_0.519_3.025681e-14
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.691561	0.078599	0.207511	0.022329
0.583522	0.03961	0.097957	0.278911
0.029232	0.013115	0.904367	0.053285
0.044118	0.011208	0.927742	0.016932
0.050792	0.80846	0.041778	0.09897
0.01351	0.917137	0.003046	0.066307
0.967379	0.013235	0.002795	0.016592
0.033338	0.080717	0.047182	0.838763
0.077467	0.643362	0.197786	0.081385

MOTIF	Forebrain_E13.5_H3K9me3_69_135_0.518_6.867838e-14
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.811441	0.032678	0.129271	0.026611
0.828959	0.01231	0.096859	0.061872
0.071109	0.102255	0.801499	0.025136
0.103337	0.012042	0.880329	0.004293
0.195481	0.61584	0.137273	0.051406
0.007743	0.827082	0.146214	0.018961
0.837645	0.054702	0.009232	0.098422
0.105741	0.022371	0.096481	0.775407
0.016375	0.902323	0.03216	0.049143

MOTIF	Midbrain_E15.5_H3K9me3_65_106_0.521_5.236988e-13
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.874005	0.09352	0.027657	0.004818
0.74953	0.010118	0.064019	0.176333
0.00435	0.05051	0.898948	0.046192
0.103093	0.046735	0.845429	0.004743
0.145428	0.590924	0.174959	0.088689
0.006106	0.923199	0.056479	0.014217
0.813881	0.156634	0.000317	0.029168
0.043246	0.009058	0.021747	0.925948
0.032161	0.732734	0.179901	0.055205

MOTIF	Forebrain_E14.5_H3K9me3_80_120_0.510_3.219821e-07
letter-probability matrix: alength= 4 w= 11 nsites= 100 E= 1.0e-1
0.425327	0.310371	0.0	0.264301
0.825916	0.006528	0.047582	0.119973
0.015729	0.012714	0.943158	0.028398
0.011663	0.02865	0.941312	0.018374
0.250924	0.730969	0.005906	0.012201
0.0	0.757825	0.063066	0.179108
0.949585	0.017197	0.023979	0.009239
0.019859	0.008598	0.002856	0.968687
0.001303	0.56209	0.178562	0.258045
0.012249	0.946044	0.012397	0.02931
0.184861	0.337907	0.138559	0.338672

MOTIF	Forebrain_E12.5_H3K9me3_115_106_0.503_2.318553e-23
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.861111	0.039363	0.062313	0.037213
0.010545	0.023209	0.958907	0.007339
0.021351	0.290458	0.673623	0.014567
0.17331	0.743312	0.056608	0.02677
0.003045	0.741156	0.152324	0.103476
0.792615	0.040433	0.003949	0.163003
0.062382	0.052918	0.007284	0.877415
0.013673	0.795988	0.07243	0.117909
0.021207	0.955591	0.008632	0.01457
0.114432	0.346858	0.0	0.53871

MOTIF	Forebrain_E13.5_H3K9me3_84_113_0.515_3.486186e-30
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.907453	0.006023	0.048846	0.037678
0.0	0.00226	0.977814	0.019926
0.097296	0.194298	0.686626	0.02178
0.09036	0.68297	0.184465	0.042205
0.006382	0.918762	0.032981	0.041875
0.900062	0.047381	0.005375	0.047182
0.086785	0.008914	0.069878	0.834423
0.000565	0.79897	0.079109	0.121356
0.161568	0.738345	0.078826	0.021261
0.149997	0.344232	0.256075	0.249696

MOTIF	Midbrain_P0_H3K9me3_87_75_0.511_2.941552e-12
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.737109	0.064125	0.119739	0.079027
0.05442	0.006312	0.881578	0.057689
0.01869	0.054147	0.755606	0.171557
0.134886	0.840681	0.004307	0.020126
0.031329	0.947343	0.006638	0.014689
0.876365	0.039007	0.015624	0.069004
0.024692	0.102262	0.03834	0.834706
0.062368	0.642785	0.173249	0.121598
0.094717	0.819373	0.023241	0.062669
0.146979	0.493435	0.18634	0.173246

MOTIF	Hindbrain_E15.5_H3K9me3_82_64_0.516_1.508347e-18
letter-probability matrix: alength= 4 w= 9 nsites= 100 E= 1.0e-1
0.891981	0.005757	0.075993	0.026269
0.023205	0.083122	0.8652	0.028474
0.04372	0.011416	0.844608	0.100256
0.26758	0.711238	0.0	0.021181
0.033841	0.842103	0.063855	0.060201
0.76462	0.032803	0.004053	0.198523
0.032241	0.029659	0.031439	0.906661
0.117277	0.77438	0.072417	0.035927
0.02775	0.929138	0.013738	0.029375

MOTIF	Forebrain_E15.5_H3K9me3_41_34_0.522_8.023219e-16
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.861165	0.013047	0.076107	0.049681
0.040225	0.011372	0.93404	0.014363
0.062816	0.024785	0.900157	0.012242
0.201776	0.735163	0.004093	0.058968
0.040123	0.774701	0.003003	0.182173
0.829674	0.01675	0.021027	0.13255
0.007636	0.037671	0.052717	0.901976
0.089624	0.71663	0.085047	0.1087
0.043871	0.913643	0.006451	0.036035
0.179238	0.503646	0.040804	0.276312

MOTIF	Midbrain_E15.5_H3K9me3_68_32_0.520_4.359952e-30
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.812409	0.012448	0.045735	0.129409
0.031593	0.007822	0.860384	0.100201
0.092555	0.027333	0.847515	0.032597
0.095711	0.798807	0.014026	0.091456
0.045153	0.866821	0.007236	0.080791
0.742244	0.021715	0.015714	0.220327
0.023475	0.019028	0.050258	0.907239
0.08109	0.734924	0.063518	0.120468
0.079869	0.856614	0.006091	0.057426
0.138065	0.282126	0.090963	0.488846

MOTIF	Neural-Tube_E15.5_H3K9me3_78_51_0.515_2.134259e-20
letter-probability matrix: alength= 4 w= 10 nsites= 100 E= 1.0e-1
0.844973	0.027012	0.083153	0.044862
0.062163	0.044837	0.854483	0.038517
0.034538	0.144637	0.781612	0.039213
0.109098	0.810055	0.01007	0.070778
0.033911	0.905149	0.03142	0.02952
0.82179	0.017675	0.011205	0.14933
0.040321	0.055881	0.051275	0.852523
0.087939	0.701474	0.094618	0.115969
0.073034	0.840393	0.028521	0.058052
0.112259	0.438618	0.048123	0.401